Extracellular cyclophilin A possesses chemotaxic activity in cattle

Cyclophilin A (CyPA) was originally discovered in bovine thymocytes as a cytosolic binding protein of the immunosuppressive drug cyclosporine A. Recent studies have revealed that in mice and humans, CyPA is secreted from cells in injured or infected tissues and plays a role in recruiting inflammatory cells in those tissues. Here we found that in cattle abundant level of extracellular CyPA was observed in tissues with inflammation. To aid in investigating the role of extracellular CyPA in cattle, we generated recombinant bovine CyPA (rbCyPA) and tested its biological activity as an inflammatory mediator. When bovine peripheral blood cells were treated with rbCyPA in vitro, we observed that rbCyPA reacts with the membranous surface of granulocytes, monocytes and lymphocytes. Chemotaxis analysis showed that the granulocytes migrate toward rbCyPA and the migration is inhibited by pre-treatment with an anti-bovine CyPA antibody. These results indicate that, as for mice and humans, extracellular CyPA possesses chemotactic activity to recruit inflammatory cells (e.g., granulocytes) in cattle, and could thus be a potential therapeutic target for the treatment of inflammation.     

A preliminary study to understand the transport process for the eggs and larvae of Japanese Pacific walleye pollock Theragra chalcogramma using particle-tracking experiments based on a high-resolution ocean model

We developed a realistic 1/50° high-resolution ocean model capable of resolving submesoscale variability, and performed particle-tracking experiments based on this ocean model to identify elements that significantly affect the transport of the eggs and larvae of the Japanese Pacific walleye pollock Theragra chalcogramma into Funka Bay. The high-resolution model reproduced representative features of the oceanographic conditions of the main spawning area and season. A comparison of particle-tracking experiments performed under the passive transport condition based on high-resolution (1/50°) and low-resolution (1/10°) ocean models showed that high-resolution modeling is essential in order to realistically simulate the transport process. In this regard, however, the vertical motion of particles cannot be explained by the passive transport condition, as it leads to unrealistically deep sinking of particles in the simulation. Turning our attention to feasible non-passive transport conditions, we then incorporated the buoyancy motion of particles and conducted additional experiments that mainly differed in the particle density adopted. We clarified that buoyancy is an important factor in the retention of particles near the sea surface, and that the ratio of the particles that remain in Funka Bay to the number of particles released is sensitive to the vertical motions/positions of the particles, implying that it is necessary to model this vertical motion more accurately by incorporating more realistic biological processes or a statistical distribution into the particle-tracking model.     

A useful method for preparing microsclerotial inoculum of Verticillium dahliae

Various methods of inoculating plants with Verticillium dahliae have been described; however, so far, there are no effective preparations of its microsclerotia, a major source of infection under natural field conditions. In this study, we developed a simple and effective method to prepare microsclerotial inoculum of V. dahliae using a cellophane medium that effectively promoted microsclerotia formation. In addition, a sieving process allowed the preparation of inoculum exclusively composed of microsclerotia. Our novel method provides a reproducible and stable inoculum for disease induction by V. dahliae under conditions that approximate natural infections.     

Importance of AC-rich Element on Pea Phenylalanine Ammonia-Lyase Gene 1 Promoter for Expression Induced by Nonpathogenic Attack

Regulatory elements in the promoter of phenylalanine ammonia-lyase gene 1 of pea (PSPAL1) in response to nonpathogenic attack were identified by in vivo footprinting analysis. The footprints determined AC-rich sequences, Box-I and Box-II, that were conserved at similar positions in the phenylpropanoid gene promoters from several plants. To reveal the functions of the AC-rich sequence in nonpathogen-responsiveness, we constructed Box-I-deletion PSPAL1 promoter (dB-1) with GUS reporter gene and transformed it into tobacco plant. The dB-1 had reduced basal expression and a complete loss of nonpathogen-responsiveness. These results indicate the essentiality of Box-I for PSPAL1 activation induced by nonpathogenic attack. Received 27 October 1999/ Accepted in revised form 25 November 1999     

Identification of overwintering vegetative cells of the bivalve-killing dinoflagellate <Emphasis Type="Italic">Heterocapsa circularisquama</Emphasis> in Uranouchi Inlet,Kochi Prefecture,Japan

ABSTRACT:   Red tides of Heterocapsa circularisquama have led to serious damage of bivalve aquacultures in western coastal areas of Japan. To understand the whole picture regarding the ecology of this species, it is essential to clarify its overwintering mechanisms. In this study, the population dynamics of H. circularisquama were investigated from February 2004 to November 2005, and overwintering cells were identified for the first time in water columns of Uranouchi Inlet, Kochi Prefecture, Japan. Heterocapsa circularisquama cells were detected by the indirect fluorescent antibody technique using monoclonal antibodies that specifically recognize and react to this species. Vegetative cells were almost always detected from the first observation in February 2004 to November 2005 with temperatures of 10.5–30.6°C. During the period from winter to spring, this species survived in areas with a temperature higher than 10°C. The overwintering cells of H. circularisquama were isolated in March 2004, and identification was made via observation of the morphology and body scales of the cultured cells. These overwintering cells were identified as H. circularisquama and reacted to the monoclonal antibody. These results indicate that H. circularisquama can overwinter and survive throughout the year in a vegetative cell state in Uranouchi Inlet.     

Fate of pesticides during beer brewing

The fates of more than 300 pesticide residues were investigated in the course of beer brewing. Ground malt artificially contaminated with pesticides was brewed via steps such as mashing, boiling, and fermentation. Analytical samples were taken from wort, spent grain, and beer produced at certain key points in the brewing process. The samples were extracted and purified with the QuEChERS (Quick Easy Cheap Effective Rugged and Safe) method and were then analyzed by LC-MS/MS using a multiresidue method. In the results, a majority of pesticides showed a reduction in the unhopped wort and were adsorbed onto the spent grain after mashing. In addition, some pesticides diminished during the boiling and fermentation. This suggests that the reduction was caused mainly by adsorption, pyrolysis, and hydrolysis. After the entire process of brewing, the risks of contaminating beer with pesticides were reduced remarkably, and only a few pesticides remained without being removed or resolved.     

Effect of forest structure on the spatial variation in soil respiration in a Bornean tropical rainforest

This study was undertaken to identify critical and practical factors explaining spatial variations in soil respiration and to estimate stand-scale soil respiration in an aseasonal tropical rainforest on Borneo Island. To this aim, we conducted soil respiration measurements at 25 points in a 40 m × 40 m subplot of a 4 ha study plot between 2002 and 2006, and examined the spatial variation in soil respiration averaged over the 4 years in relation to soil, root, and forest structural factors. In addition, we examined the spatial representativeness of soil respiration measured in the subplot using a specific scaling procedure. Consequently, we found significant positive correlation between the soil respiration and forest structural parameters such as the mean diameter at breast height (DBH), total basal area, and maximum DBH within 6 m of the measurement points. The most important factor was the mean DBH within 6 m of the measurement points, which had a significant linear relationship with soil respiration. Using the derived linear regression and an inventory dataset, we estimated the 4 ha plot-scale soil respiration. The 4 ha plot-scale estimation (6.0 μmol m⁻² s⁻¹) was nearly identical to the subplot-scale measurements (5.7 μmol m⁻² s⁻¹), which were roughly comparable to the nocturnal CO₂ fluxes calculated using the eddy covariance technique. In addition, we discuss characteristics of the stand-scale soil respiration at this site by comparing with those of other forests reported in previous literature in terms of the soil C balance. Soil respiration at our site was noticeably greater, relative to the incident litterfall amount, than soil respiration in other tropical and temperate forests probably owing to the larger total belowground C allocation by emergent trees. Overall, this study suggests the arrangement of emergent trees with larger DBH and their belowground C allocation could be primary factors controlling spatial variations in soil respiration in the tropical rainforest.     

Nitro-PAHs and PAHs in Atmospheric Particulate Matters and Sea Sediments in Hiroshima Bay Area, Japan

Atmospheric and sea sediment concentrations were measured for eight nitrated polycyclic aromatic hydrocarbons (nitro-PAHs) and three unsubstituted PAHs in a suburban area and sea sediments in the Hiroshima Bay watershed area, Japan, from July to December, 2006 (atmospheric particulate matter) and in September and November, 2004 (sea sediments). Atmospheric concentration was higher in winter than summer for both nitro-PAHs and PAHs. Concentrations in sea sediments were less than 10%, and pattern was similar to those of atmospheric particles. Several combustion emission sources were also measured, and the 1-NP/Pyr ratio was compared to environmental values. The ratio of atmospheric and sea sediments were significantly lower than diesel particulate matters. Further, the vehicle emission loading and sea sedimentation loading was evaluated in this watershed area, and from the comparison, the existence of other important sources PAHs were suggested.     

Influence of decreasing water temperature and shortening of the light phase on macronutrient self-selection by rainbow trout Oncorhynchus mykiss and common carp Cyprinus carpio

SUMMARY: Macronutrient self-selection patterns in rainbow trout and common carp, which were maintained in groups, were examined when both water temperature and duration of light phase gradually decreased. Three semipurified macronutrient diets composed mainly of protein (casein and gelatin; crude protein (CP) = 65%), fat (pollock oil and soybean oil; crude fat (CF) = 38%), or digestible carbohydrate (dextrin and gelatinized starch; crude starch (CS) = 57%) were offered to five groups of trout (20 fish/group, 51 g/fish) and carp (15 fish/group, 36 g/fish) using three self-feeders. A standard diet (ST) containing the three macronutrients at an appropriate ratio (CP = 47%, CF = 14%, CS = 25%) was also offered to three groups each by a single self-feeder. After an initial 3 weeks of experiencing a long photoperiod (14 h light : 10 h dark cycle) and high water temperature (trout, 17°C; carp, 25°C), the light phase and temperature were gradually decreased in the following 3 weeks to 10 h light : 14 h dark, and 8°C for trout and 13°C for carp, and feeding was continued for a further 3 weeks under low temperature and short photoperiod conditions. Growth and protein utilization parameters between the ST diet self-fed groups and macronutrient diet self-selection groups were not different ( P > 0.05) for both trout and carp. Trout preferred the high-protein diet (HP) to the high-fat and the high-carbohydrate diets ( P < 0.05) regardless of the changes in water temperature and photoperiod. Carp also preferred the HP diet ( P < 0.01) under the high temperature and long photoperiod conditions; however, this preference gradually disappeared with lower temperatures and shorter photoperiods. These results suggest that the most appropriate macronutrient ratios in carp diets change with environmental conditions.     

Relationship between body length, processed-meat length and seasonal change in net processed-meat yield of Japanese mantis shrimp Oratosquilla oratoria in Tokyo Bay

ABSTRACT:   There is concern regarding a possible decrease in the minimum exploitable size of the mantis shrimp Oratosquilla oratoria in Tokyo Bay, coincident with a decline in stock size. To assess this problem, the condition factor, the relationship between body length and processed-meat length, and the estimated body length for each market size category were investigated and compared monthly. The condition factor was lowest in spring and peaked in winter. The difference between body length and meat length was higher in summer and winter than in spring and autumn, suggesting that a high condition factor does not result in an increased net yield of processed meat. The annual mean minimum exploitable size in the present low-stock-size condition did not differ from the minimum exploitable size measured during a high-stock-size period (11-cm body length). However, the minimum exploitable size changed seasonally, which coincided with seasonal change in the net processed-meat yield. Exploitation during the season when net meat yield is high would result in increase of the large-sized meat products of high price.