Congruity backcrossing as a means of creating genetic variability in self pollinated crops: seed morphology of Phaseolus vulgaris L. and P. acutifolius A. Gray hybrids

Summary Seeds of early generations of three reciprocal congruity-backcross (CBC) pedigrees, developed by backcrossing Phaseolus vulgaris-P. acutifolius hybrids to each of the parent species in alternate generations, exhibited a preponderance of traits (size, shape, color, and pattern) of the cytoplasmic parent. The large size of Red Cloud (V₁), the P. vulgaris parent common to all of the pedigrees, dominated pedigrees with V₁ as the cytoplasmic parent, while the small size and rounded or square shapes of the tepary parents, wild P. acutifolius var. acutifolius PI 263590 or G400445 (A₁₉), wild P. acutifolius var. latifolius PI 406622 (A₁₀), or cultivated P. acutifolius var. latifolius Serowi PI 319443 (A₉), were the majority phenotypes when P. acutifolius was the cytoplasmic parent. Continuing through the second cycle of CBC, that is the second backcross with each of the parent species or the fourth backcross, began an amelioration of the apparent cytoplasmic effect on gene expression, as reciprocal pedigrees became more alike, usually with intermediate expression of parental traits or the appearance of new traits. The large seed size of V₁ was recovered in hybrids with P. acutifolius cytoplasm and the kidney shape of V₁ became rare in hybrids with P. vulgaris cytoplasm. Although the tepary-bean parents represented two subspecies and both cultivated and wild P. acutifolius, the three sets of reciprocal-hybrid pedigrees with P. vulgaris Red Cloud are surprisingly similar. It may be that the exotic parent used to develop a CBC pedigree should be selected more for combining ability in the interspecific cross than for specific economic traits. While the number of generations (six or more) required to produce fertile, intermediate CBC hybrids (that did not require embryo rescue) may preclude routine use of this method by practical plant breeders, the crossability of advanced hybrids with both parental species and the amount of variability apparent in advanced-hybrids progenies suggests that CBC would be valuable for maintaining exotic germplasm in immediately useful forms.     

Development and Implementation of a Forest Nursery Accreditation Policy at a Local Level in Leyte, Philippines

Through a series of workshops with the stakeholders including nursery operators, tree farmers, staff of the Department of Environment and Natural Resources, local government units and the academe, a forestry seedling nursery accreditation policy was developed. The resulting policy was subsequently implemented by the municipal government of Palompon, Leyte. The accreditation policy encouraged nursery operators to follow smallholder-based best management practices for tree nurseries. Implementation of the nursery accreditation policy improved farmers’ knowledge and skills in the production of high quality seedlings, encouraged adoption of BMP for forest nurseries, provided additional source of income for the farmers, enabled members of the groups operating the communal nursery to forge closer relationship with each other, encouraged utilization of farmers’ free time in productive activities, developed farmers’ confidence in producing high quality planting materials, and gained for the farmers favourable attention from various organizations and groups. The Bennett’s hierarchy of project outcomes showed that the implementation of accreditation scheme achieved high levels of outcomes, indicating that it led to substantial improvements in the lives of the farmers.     

Rust-proofing wheat for a changing climate

This paper offers projections of potential effects of climate change on rusts of wheat and how we should factor in a changing climate when planning for the future management of these diseases. Even though the rusts of wheat have been extensively studied internationally, there is a paucity of information on the likely effects of a changing climate on the rusts and their influence on wheat production. Due to the lack of published empirical research we relied on the few published studies of other plant diseases, our own unpublished work and relevant information from the vast literature on rusts of wheat to prepare this overview. Three broad areas of potential risks from a changing climate were described: increased loss from wheat rusts, new rust pathotypes evolving faster and the reduced effectiveness of rust resistances. Increased biomass of wheat crops grown in the presence of elevated CO₂ concentrations and higher temperatures will increase the leaf area available for attack by the pathogen leading to increased inoculum production. If changed weather conditions were to accelerate the life cycle of a pathogen, the increased inoculum can lead to severe rust epidemics in many environments. Likewise should the effects of climate change result in more conducive conditions for rust development there will also be a corresponding increase in the rate of evolution of new pathotypes which could increase the rate of appearance of new virulences. The effectiveness of some rust resistance genes is influenced by temperature and crop development stage. Climate change may directly or indirectly influence the effectiveness of some resistance genes but this can not be ascertained due to a complete lack of knowledge. Since disease resistance breeding is a long term strategy it is important to determine if any of the important genes may become less effective due to climate change. Studies must be made to acquire new information on the rust disease triangle to increase the adaptive capacity of wheat under climate change. Leadership within the Borlaug Global Rust Initiative (BGRI) is needed to broker research on rust evolution and the durability of resistance under climate change.     

The Physcomitrella genome reveals evolutionary insights into the conquest of land by plants

We report the draft genome sequence of the model moss Physcomitrella patens and compare its features with those of flowering plants, from which it is separated by more than 400 million years, and unicellular aquatic algae. This comparison reveals genomic changes concomitant with the evolutionary movement to land, including a general increase in gene family complexity; loss of genes associated with aquatic environments (e.g., flagellar arms); acquisition of genes for tolerating terrestrial stresses (e.g., variation in temperature and water availability); and the development of the auxin and abscisic acid signaling pathways for coordinating multicellular growth and dehydration response. The Physcomitrella genome provides a resource for phylogenetic inferences about gene function and for experimental analysis of plant processes through this plant's unique facility for reverse genetics.     

Loss of IGF2 imprinting: a potential marker of colorectal cancer risk

Loss of imprinting (LOI), an epigenetic alteration affecting the insulin-like growth factor II gene (IGF2), is found in normal colonic mucosa of about 30% of colorectal cancer (CRC) patients, but it is found in only 10% of healthy individuals. In a pilot study to investigate the utility of LOI as a marker of CRC risk, we evaluated 172 patients at a colonoscopy clinic. The adjusted odds ratio for LOI in lymphocytes was 5.15 for patients with a positive family history [95% confidence interval (95% CI), 1.70 to 16.96; probability P = 0.002], 3.46 for patients with adenomas (95% CI, 1.14 to 11.37; P = 0.026), and 21.7 for patients with CRC (95% CI, 3.48 to 153.6; P = 0.0005). LOI can be assayed with a DNA-based blood test, and it may be a valuable predictive marker of an individual's risk for CRC.     

Chronology of hawaiian glaciations

Both potassium/argon and carbon-14 ages of lava flows and tephra layers interstratified with glacial deposits on Mauna Kea, Hawaii, indicate that four episodes of ice cap glaciation culminated about 20,000, 55,000, 135,000, and 250,000 years ago. These episodes are correlated with marine isotope stages 2, 4, 6, and 8, marking times of high global ice volume.     

Evidence for substantial variations of atmospheric hydroxyl radicals in the past two decades

The hydroxyl radical (OH) is the dominant oxidizing chemical in the atmosphere. It destroys most air pollutants and many gases involved in ozone depletion and the greenhouse effect. Global measurements of 1,1,1-trichloroethane (CH3CCl3, methyl chloroform) provide an accurate method for determining the global and hemispheric behavior of OH. Measurements show that CH3CCl3 levels rose steadily from 1978 to reach a maximum in 1992 and then decreased rapidly to levels in 2000 that were lower than the levels when measurements began in 1978. Analysis of these observations shows that global OH levels were growing between 1978 and 1988, but the growth rate was decreasing at a rate of 0.23 +/- 0.18% year(-2), so that OH levels began declining after 1988. Overall, the global average OH trend between 1978 and 2000 was -0.64 +/- 0.60% year(-1). These variations imply important and unexpected gaps in current understanding of the capability of the atmosphere to cleanse itself.