Molecular design of antifungal agents

In a rational approach to the design of antifungal agents against Saccharomyces cerevisiae, a series of alkyl gallates (3,4,5-trihydroxybenzoates) were synthesized and assayed. Nonyl gallate (1) was found to be the most effective with a minimum fungicidal concentration (MFC) of 12.5 microg/mL (42 microM), followed by octyl gallate (2) with an MFC of 25 microg/mL (89 microM). These MFCs are little influenced by pH values. A time-kill curve study indicates that nonyl gallate exhibits fungicidal activity against S. cerevisiae at any growing stage. The antifungal activity of nonyl gallate is due primarily to its ability to act as a nonionic surface-active agent (surfactant). The length of the alkyl group is not a major contributor but plays a role in eliciting the activity to a large extent. As far as alkyl gallates are concerned, their antimicrobial spectra and potency depend largely on the hydrophobic portion of the molecules.     

Modes of antifungal action of (2E)-alkenals against Saccharomyces cerevisiae

A series of aliphatic (2E)-alkenals from C(5) to C(14) were tested for their antifungal activity against Saccharomyces cerevisiae ATCC 7754. (2E)-Undecenal (C(11)) was found to be the most effective with the minimum fungicidal concentration (MFC) of 6.25 microgram/mL, followed by (2E)-decenal (C(10)) with an MFC of 12.5 microgram/mL. The time-kill curve study showed that (2E)-undecenal was fungicidal against S. cerevisiae at any growth stage, and this activity was not influenced by pH values. The (2E)-alkenals inhibited glucose-induced acidification by inhibiting the plasma membrane H(+)-ATPase. The primary antifungal action of medium-chain (C(9)-C(12)) (2E)-alkenals against S. cerevisiae comes from their ability to function as nonionic surface-active agents (surfactants), disrupting the native membrane-associated function nonspecifically. Hence, the antifungal activity of (2E)-alkenals is mediated by biophysical processes, and the maximum activity can be obtained when the balance between the hydrophilic and hydrophobic portions becomes the most appropriate.     

Quantitative trait loci for soil-penetrating ability of roots in durum wheat

Increasing root penetration (RP) ability into hard soil is important to improve drought resistance in durum wheat. Traits related to RP ability were evaluated in 110 recombinant inbred lines (RILs) derived from a cross between 'Jennah Khetifa' and 'Cham1' using paraffin-Vaseline (PV) discs. QTL analyses were made for the number of roots penetrating the PV disc (PVRN), total number of seminal and crown roots (TRN), RP index (PVRN/TRN) and root dry weight (DW). 'Jennah Khetifa' had higher PVRN, RP index and root DW values than 'Cham1', and the RILs showed significant differences for these traits. Two closely-linked markers, Xgwm617a and Xgwm427b , on the long arm of chromosome 6A were associated with PVRN and RP index. For root DW, a QTL was linked to marker Xgwm11 on chromosome 1B. Alleles of 'Jennah Khetifa' were associated with increased PVRN, RP index and root DW. No QTL was detected for TRN in this mapping population. The absence of co-located QTLs suggested that RP ability was controlled separately from TRN and root DW. Although the population size and number of replications were small, this study helps in understanding the complexity of root growth and the potential of marker-assisted selection for selecting genotypes with high RP ability in durum wheat populations.     

Evidence of porcine circovirus infection in pigs with wasting disease syndrome from 1985 to 1999 in Hokkaido, Japan

An epizootiological survey with histopathological methods was conducted for porcine circovirus in 220 diseased pigs (1-200 days old) in 49 farms from 1985 to 1999. Histopathological lesions containing PCV antigen were detected mainly in the lymphoid tissues from 42 of 189 diseased pigs (22.2%) in 4 of 45 farms (8.9%) from 1990 to 1999. The rate of positive pigs gradually increased from 1997 onward and PCV infection was found in 50% of diseased pigs in 1999. Histopathologically, the lesions in the lymphoid tissues (including lymph nodes, Peyer's patches, tonsil and spleen) were highly correlated with the presence of numerous spherical basophilic intracytoplasmic inclusion bodies with PCV antigen, and consisted of lymphocellular depletion and infiltration of macrophages. Although most affected cells showed cytoplasmic reactivity for PCV, intranuclear antigen was also seen in the lymphocytes, macrophages and ileal epithelial cells. Ultrastructurally, macrophages and giant cells contained electron-dense, round to ovoid lysosomal bodies, in which there were concentric circle or paracrystalline arrays of small nonenveloped icosahedral viral particles, approximately 15-17 nm in diameter. Other consistent infectious agents were present in 90.5% of cases, and porcine reproductive and respiratory syndrome virus infection was in 52.4% of the cases with PCV. The histopathological findings suggested that PCV induced systemic immunosuppression in the infected pigs and made them more susceptible to infection of the organisms. Because of the presence of PCV antigens in the intestinal epithelium, feces may play a significant role in dissemination of PCV.     

Effect of soil exchangeable potassium content on cesium absorption and partitioning in buckwheat grown in a radioactive cesium-contaminated field

The effect of soil exchangeable (plant-available) potassium (ExK) content on cesium (Cs) absorption and translocation in buckwheat was evaluated in a field contaminated with radioactive Cs (¹³⁴Cs and ¹³⁷Cs, RCs) in 2013. The RCs concentration in buckwheat was significantly positively correlated with the naturally occurring stable Cs (¹³³Cs, SCs) concentration, and was lower at higher soil ExK content. The RCs and SCs were actively absorbed by buckwheat until the flowering stage. The soil ExK content was significantly negatively correlated with soil exchangeable RCs and SCs (ExRCs and ExSCs) concentrations. Greater RCs and SCs absorption by buckwheat in soils with low ExK contents was mainly due to higher soil ExRCs and ExSCs concentrations. Reproductive organs showed the largest differences in SCs concentration between low-ExK and high-ExK plots. The root–shoot and shoot–reproductive organs translocations of SCs markedly decreased with increasing soil ExK content. In the root–shoot and shoot–reproductive organs translocations, the discrimination of SCs and K decreased with decreasing soil ExK content. Our main findings were as follows: (1) because RCs are mainly taken up at the earlier growth stage, potassium should be applied as a basal fertilizer to decrease the RCs concentration in buckwheat; (2) lower soil ExK content led to higher soil ExRCs concentrations, resulting in greater RCs absorption by buckwheat; (3) the high Cs absorption and translocation and weaker discrimination between Cs and K in low ExK content soil may be due to the expression of K transporter(s) with weak discrimination between Cs and K.     

Genetic diversity among Japanese local populations of an edible and medicinal coastal plant Glehnia littoralis F. Schmidt ex Miq.

Genetic Resources and Crop Evolution - To assess the current genetic status of a useful coastal plant Glehnia littoralis F. Schmidt ex Miq. in Japan, the genetic diversity within and among natural...     

Genetic mechanisms of postzygotic reproductive isolation: An epistatic network in rice

Products of interspecific crosses often show abnormal phenotypes such as sterility, weakness and inviability. These phenomena play an important role in speciation as mechanisms of postzygotic reproductive isolation (RI). During the past two decades, genetics studies in rice have characterized a number of gene loci responsible for postzygotic RI. I have identified 10 loci including three sets of epistatic networks in a single inter-subspecific cross (Oryza sativa ssp. indica × japonica). These results suggest that RI genes cause developmental dysfunction of vegetative and/or reproductive organs through a variety of molecular pathways. The latest molecular studies demonstrated that hybrid incompatibility is mainly due to deleterious interactions caused by species-specific mutations of two or more genes, mediated by proteins acting within the same molecular pathway. Because genetic interactions provide a perspective on gene function, epistatic networks are a key to the understanding of the molecular basis of postzygotic RI. In this review, I focus on recent progress in postzygotic RI studies in rice and discuss the evolutionary significance as well as implications for improving rice productivity.     

Influence of saltwater wedges on irrigation water near a river estuary

Paddy and Water Environment - Paddy fields irrigated using water from the Shinkawa River in Niigata, Japan, are subject to adverse effects associated with the occurrence of saltwater wedges in the...     

CMA staining analysis of chromosomes in several species of Aurantioideae

Fluorochrome staining with chromomycin A₃ (CMA) was used to characterize and compare the CMA banding patterns of chromosomes of 17 species from 13 genera of Aurantioideae, which is one of the seven subfamilies of Rutaceae. All species used in this study had 2n = 18 chromosomes. These chromosomes were classified into five types based on the number and position of CMA-positive bands; B: one telomeric and one proximal band, C: two telomeric bands, D: one telomeric band, E: without bands and Dst: type D with a satellite chromosome. Each species possessed two or four types of chromosomes and unique CMA banding patterns. The CMA banding patterns were 6D + 12E in Clausena anisata (Willd.) Hook. f.,1C + 3D + 14E in Murraya koenigii (L.) Spreng., 1C + 11D + 6E in Murraya paniculata (L.) Jack, 1B + 1C + 10D + 6E in Merrillia caloxylon (Ridl.) Swing., 1C + 9D + 7E + 1Dst in Paramignya lobata Burkill, 2C + 5D + 11E in Severinia buxifolia (Poir.) Tenore, 5D + 13E in Hesperethusa crenulata (Roxb.) Roem., 16D + 2E in Citropsis gabunensis (Engl.) Swing. et M. Kell, 14D + 4E in Citropsis schweinfurthii (Engl.) Swing. et M. Kell, 8D + 10E in Atalantia monophylla DC., 1C + 3D + 14E in Atalantia ceylanica (Arn.) Oliv., 2D + 16E in Atalantia roxburghiana Hook. f., 18E in Swinglea glutinosa (Blanco) Merr., 2D + 16E in Aegle marmelos (L.) Corr., 4D + 14E in Afraegle paniculata (Schum.) Engl., 2B + 2D + 13E + 2Dst in Feronia limonia (L.) Swing. and 3B + 9D + 6E in Feroniella oblata Swing. The advanced genera in each tribe and subtribe such as Merrillia and Feroniella showed heterochromatin (CMA-positive bands) rich chromosome configuration in general. Swinglea glutinosa without heterochromatin rich chromosome, which is considered to be the most primitive chromosome configuration, seems to be the key genus for clarifying the evolution of the tribe Citreae.