Parataxonomy,perceived dynamics and diversity of uses of two Detarium species in Benin (West Africa)

The contribution of species providing non-timber forest products to the livelihoods of local communities is well established. However, this contribution may be limited by the existence of confusion while dealing with close relative species. This is particularly the case for Detarium microcarpum Guill & Perr. and D. senegalense J.F.Gmel. The objectives of this study were to (1) identify the criteria used by local communities to differentiate D. microcarpum and D. senegalense, (2) determine local communities’ perception of the past dynamics of the two species and (3) assess the diversity of uses of both species. Data on differentiation criteria, perceived variation in the species abundance, and the different uses were collected using individual semi-structured interviews (n?=?914 informants). The relative frequency of citation and the use-value were calculated. The Chi-square test, correspondence analysis and generalized linear model were used for statistical analyses. Informants used fourteen criteria to differentiate the two species. The predominant criteria were the shape of the seed (87.86%) and the shape of the fruit (67.86%). Most of the informants reported that the populations of D. microcarpum (61.80%) and that of D. senegalense (60.12%) have regressed. In total, 168 use-reports were enumerated for the two species with 19 shared use-reports. We concluded that local communities use a variety of criteria to differentiate both species, the most popular being morphological traits of the fruits. Both species shared several use-reports (11.31%). However, their populations have declined. The documented uses for both species provide preliminary information for their future food uses and drug discovery.

     

PCB partitioning during sediment remobilization—a 1D column experiment

Purpose

Remobilization of polychlorobiphenyl (PCB)-contaminated sediments by anthropogenic activities (e.g. dredging) or natural flow conditions could lead to the release of PCBs into the water column and consequently increase the availability of PCBs to benthic organisms. The fate of the released PCBs following such events is not well understood and such knowledge is necessary for the management of contaminated sediments. The objective of this study was to understand the processes that control the fate of PCBs following remobilization of field-aged contaminated sediments.

Materials and methods

Sediments contaminated with PCBs collected from Lake Bourget (Savoie, France) were resuspended in a column experiment. The relationships between physical–chemical parameters—i.e. suspended particulate matter, pH, inorganic and organic carbon content, redox-sensitive species and the concentrations of dissolved PCBs both in the water column and in the interstitial water of the sediment—were investigated so as to determine the key processes controlling PCB fate.

Results and discussion

Following the simulated resuspension event (SRE), dissolved PCBs were found in much higher concentrations in the water column than under stationary conditions. Desorption of PCBs from the sediment depended on the degree of the hydrophobicity of the PCBs and the initial PCB content in the sediment. Principal component analysis showed that the variations in the concentrations of released PCBs over time and space closely followed those of suspended particulate matter (SPM) and not those of redox conditions. The partitioning behaviour of PCBs on SPM showed that equilibrium state was not attained within 40 days following the SRE. A particle size fractionation study, before and after remobilization of the sediment, showed the presence of PCBs in every fraction of the sediment, but with higher amounts in large particles with high organic matter content and in the finest fractions. Remobilization of contaminated sediment did not affect this distribution profoundly but a significant enrichment in PCBs of the clay-sized fraction was observed in the re-settled sediment.

Conclusions

Sediment resuspension induced non-equilibrium conditions in the water column for more than 5 weeks and led to the enrichment with PCBs of the newly formed surface bed sediment. This enrichment was due to the preferential re-sorption of PCBs on clay-sized particles during the SRE and to the physical segregation and accumulation of the less dense particles at the surface of the sediment column; such particles thought to be the principal carriers of contaminants. These changes concerned <0.05 % of the total PCB content.     

Feed intake, growth and nutrient utilization in Atlantic halibut (Hippoglossus hippoglossus) fed diets containing a bacterial protein meal

Triplicate groups of Atlantic halibut were fed diets containing 0%, 9% or 18% of a bacterial protein meal (BPM) produced from natural gas in a 9‐week trial. Growth rates, relative feed intake, feed efficiency ratio and retention of all indispensable amino acids were significantly lower in fish fed the 18% BPM diets than in those fed the 0% and 9% BPM diets. There were no significant treatment effects on urea levels in plasma, liver or muscle, or in uric acid levels in plasma. The hepatosomatic index was lowest in fish fed the 18% BPM diet. Although the concentration of copper, an element abundant in BPM, increased in the liver as dietary BPM level increased, the total copper content in liver decreased. Fish fed the 0% and 9% BPM diets had a higher degree of supranuclear vacuolization of pyloric caeca and mid‐intestine epithelia compared with fish fed the 18% BPM diet. In conclusion, the halibut fed the 9% BPM diet performed equally well as the control group regarding growth, feed intake and feed efficiency ratio, whereas performance was reduced in the fish fed the 18% BPM diet.     

Effects of diets containing a bacterial protein meal on growth and feed utilisation in rainbow trout (Oncorhynchus mykiss)

Triplicate groups of rainbow trout with initial weight 361 g were fed either a fish meal based control diet or diets containing 9, 18 or 27% bacterial protein meal (BPM) or 9% of an autolysate (AU) of the BPM. No significant treatment effects were found on specific growth rates (SGR), feed intake, feed efficiency ratio (FER), or retention of nitrogen, amino acids or energy. The apparent digestibility coefficients (ADC) of nitrogen, energy and most indispensable amino acids decreased when BPM was included in the diet. The ADC of lipid, sum of amino acids, arginine, lysine, threonine and most of the dispensable amino acids were reduced at 27% BPM inclusion compared to the control, 9% and 18% BPM diets. None of the ADC estimated was different in the 9% AU diet compared to the 9% BPM diet. The loss of nitrogen and energy in faeces per kg gain increased as the dietary BPM or AU levels increased, and the energy used for activity and maintenance was higher in fish fed the 27% BPM diet than in fish fed the other diets (P < 0.05). There were no significant differences in the urea concentrations in plasma, liver and muscle, whereas the uric acid level in plasma was elevated in trout fed the 27% BPM diet. Histological evaluation of tissue from the stomach, pyloric caeca, mid-intestine and distal intestine did not reveal any diet-related morphological changes.In conclusion, no significant differences in growth and feed efficiency were found in the rainbow trout fed diets containing up to 27% BPM, and the AU did not increase fish performance compared to the BPM. Based on the data from this study, at levels up to 27% dietary inclusion, BPM is a good replacement for fish meal in diets for rainbow trout.     

Dead or alive — Old empty shells do not prompt false-positive results in environmental DNA surveys targeting the freshwater pearl mussel (Margaritifera margaritifera L.)

1. Environmental DNA (eDNA) from water samples is increasingly used to detect the presence and distribution of species in aquatic ecosystems. However, before implementing eDNA in monitoring programmes, various species-specific sampling or analytical issues remain to be resolved in order to minimize frequencies of false-positive and -negative results. For example, empty shells from freshwater pearl mussels (Margaritifera margaritifera) contain extractable DNA (chemical extraction from ground-up shells) suggesting a risk of false-positive samples at stream sites with extinct populations but with empty shell material remaining.
2. The aim of this study was to investigate whether empty and naturally degrading shells from M. margaritifera can cause false-positive eDNA signals in water samples.
3. Water samples were collected from outdoor stream channels (in Lemming, Denmark) with living freshwater pearl mussels or empty shell material (density ~10 individuals m⁻²) during a 3-week experimental period. Living freshwater pearl mussels were collected from Hemgravs stream in Sweden and transported to Denmark according to permissions granted by the Swedish and Danish authorities.
4. All water samples from stream channels containing empty shells were negative for eDNA indicating that eDNA traces in stream water are most likely to originate from living individuals located upstream of the sampling site. Water samples collected from stream channels containing living individuals of M. margaritifera were consistently positive for eDNA except for one sample (interpreted as a false negative).
5. The study shows that positive eDNA signals for freshwater pearl mussels most likely reflect the presence of living individuals. Consequently, we suggest that eDNA should be used to locate remaining population fragments of M. margaritifera in deep and turbulent streams, providing a platform for faster and more efficient decision making when launching investigative and mitigation initiatives.

     

中国美利奴绵羊磷脂酶Czeta基因表达载体的构建及原核表达

构建美利奴绵羊磷脂酶 C zeta（PLCζ）融合蛋白表达载体,并在原核细胞内表达及纯化,为其特异性抗体的制备及生物学功能研究奠定基础。用 PCR 技术扩增出 PLCζ基因片段,亚克隆到原核表达载体pCzn1中,导入 Arctic Express TM （DE3）感受态细胞,IPTG 诱导表达,收样后进行 SDS-PAGE 电泳或Western blot 检验 PLCζ的表达情况。用镍离子亲和层析的方法大量纯化融合蛋白。结果显示,重组质粒经 PCR、酶切和测序鉴定证明载体构建正确。pCzn1表达载体在 Arctic Express TM （DE3）表达菌中能很好地表达融合蛋白。表达纯化后可获得了分子量约74 ku 的融合蛋白,符合预期大小。成功构建 pCzn1-PLCζ原核表达载体,表达并纯化了其融合蛋白,Western blot 试验表明其蛋白分子的完整性良好,这将有利于对 PLCζ蛋白进行深入的研究。     

台湾红罗非鱼和尼罗罗非鱼的生长特性与养殖效果的比较

在青岛罗非鱼良种场水泥池饲养环境里，对台湾 非鱼和尼罗罗非鱼的生长特性与养殖效果进行了比较研究。结果表明：在80天以前，它们的体重均呈直线增长；在体长小于10cm时，相同体长的个体，二者的体重差异不明显，在体长超过10cm后差异加大，相同体长的尼罗罗非鱼比台湾红罗非鱼重；饲养230天，尼罗罗鱼的生长速度，起捕平均规格，单位面积净产量和肥满度均高于台湾红罗非鱼，差异显著；