Oomycete species associated with Theobroma cacao crops in Colombia

The study of oomycetes associated with crops is highly important due to the economic losses they might cause. In cacao, the genus Phytophthora has been extensively studied, but little is known about other genera and species of oomycetes associated with this plant. This study aimed to determine the oomycetes’ diversity present in Colombian cacao crops. A total of 146 isolates were obtained from diseased plants and soil in 11 departments. Analysis of internal transcribed spacer (ITS) and cytochrome oxidase subunit I (coxI) sequences was performed along with the assessment of morphological characteristics. Nine species were identified, distributed in four genera: Phytophthora (P. palmivora, 54%; P. nicotianae, 1%), Phytopythium (Phy. chamaehyphon, 15%; Phy. cucurbitacearum, 9%; Phy. vexans, 7%; Phy. helicoides, 1%), Globisporangium (G. splendens, 3%), and Pythium (Py. delicense, 1%; Py. inflatum,1%). Additionally, an unidentified and possibly new species of Phytophthora (5%) and three unidentified species of Phytopythium (3%) were found. This is the first report of Globisporangium, Phytopythium, and Pythium in cacao crops of Colombia and the first report of the species Phy. chamaehyphon in the country. Interestingly, some isolates of Phytopythium spp. were isolated from necrotic leaves and vascular section of stems, which may suggest a role in cacao diseases traditionally associated with Phytophthora. Also, it is proposed that the new species of Phytophthora may be contributing significantly to black pod disease in Colombian cacao crops, and we highlight that the study of P. palmivora is urgent because of its distribution all over the country.     

Effect of annealing from traditional nixtamalisation process on the microstructural,thermal, and rheological properties of starch and quality of pozole

Eleven maize landraces were evaluated for pozole quality. The microstructural, thermal and rheological properties of annealed starch granules determine most of the quality of pozole. Annealed starch in traditional nixtamalisation has an important role in increasing gelatinisation onset (To), peak (Tp) and final (Tf) temperatures; peak, setback and final viscosity as well as the stability of the starch granule, all of which significantly affect pozole quality. Annealed starch in Cacahuacintle nixtamal (pozole end-use) increased temperatures To, Tp and Tf by >5.2, >3.8 and >4.1 °C respectively, and narrowed the range Tf − To from 13.78 to 12.62 °C. The enthalpy was reduced from 6.76 to 5.85 J/g, while the nixtamal starch in tortilla maize landraces presented fewer annealing effects. The annealing effect in nixtamal starch seems to stabilize the starch granules and avoid their collapse, compared to native starch, as shown by the X-ray diffraction peak intensity and pattern that is similar to unprocessed maize. Starch in nixtamal changes from Type A to Type V pattern in pozole. Kernel physical parameters, although important, affected the quality to a lesser extent, with the exception of the flotation index. Cacahuacintle maize landrace showed the best quality and yield as well as a short pozole cooking time.     

Relationship between teat-end condition, udder cleanliness and bovine subclinical mastitis

The aims of the present study were to relate intramammary infection (IMI) occurrence and somatic cell count (SCC) with teat-end condition (TEC) and udder cleanliness (UC). Milk samples from 1931 teats were evaluated according to the presence of IMI and SCC. Scores were applied to teats according to the TEC and to UC. Teats ends with a very rough ring had the largest number of IMI when compared to the other three categories, as well as animals with dirtier udders. The change in a TEC score increased by around 30% the chance of IMI. Also, the chance of the animal developing IMI increased by approximately 47% when the UC score increased. No significant association between both scores and quarter SCC was found. It can be concluded that animals with very rough teat end rings and very dirty udders have a greater predisposition to IMI.     

Effect of the inoculation and distribution of mycorrhizae in <Emphasis Type="Italic">Plathymenia reticulata</Emphasis> Benth under monoculture and mixed plantation in Brazil

This paper investigates the distribution of arbuscular mycorrhizal fungi (AMF) spores and AMF colonization in a field study in southeastern Brazil. Response to AMF and rhizobial inoculation was studied in monocultures of Plathymenia reticulata and mixed plantations with both Tabebuia heptaphylla and Eucalyptus camaldulensis in a sandy soil during two consecutive years. P. reticulata height and diameter and mycorrhizal colonization and AMF diversity were measured in dry and rainy periods. The inoculated treatment of E. camaldulensis, T. heptaphylla and P. reticulata mixed plants showed higher height and diameter growth of P. reticulata used as well as increased root colonization and AMF spore numbers. Spore populations were found to belong to five genera: Acaulospora, Entrophospora, Glomus, Gigaspora and Scutellospora, with Glomus dominating. Agroforestry practices including use of leguminous tree P. reticulata effectively maintained AMF spore numbers in soils and high AMF colonization levels compared with monocultures, proving an efficient system for productivity and sustainability.     

Intercropping system of tropical leguminous species and Eucalyptuscamaldulensis, inoculated with rhizobia and/or mycorrhizal fungi in semiarid Brazil

For the purpose of reforestation and wood supply the leguminous tree Anadenanthera peregrina, a native species, was intercropped with Eucalyptus camaldulensis in a degraded semiarid area of Brazil. Single and mixed stands of these species were inoculated with Rhizobium and/or arbuscular mycorrhizal fungi (AMF). The growth of all species in mixed stands did not differ from those cultivated in monoculture and land equivalent ratio (LER) exceeded unity in intercropped plots. Inoculated plants showed greater height and diameter growth and dry matter and nutrient concentration in plants of A. peregrina was higher in inoculated single plots. The distribution, composition and density of AMF species was related to the rhizosphere effect of plant species. The intercropped model where all the plants were inoculated achieved soil AMF diversity patterns similar to those of the preserved area and showed also higher soil organic matter, nutrient content as well as a reduction in soil macroporosity. This model of intercropping may be considered as an efficient system for reforestation under semiarid conditions.     

Analysis of the biodiversity of hawthorn (<Emphasis Type="Italic">Crataegus</Emphasis> spp.) from the morphological,molecular, and ethnobotanical approaches,and implications for genetic resource conservation in scenery of increasing cultivation: the case of Mexico

One hundred and forty Mexican hawthorn (Crataegus spp.) accessions from six regions are preserved at the BGT-UACH germplasm bank (Mexico), comprising the most comprehensive living collection of Mexican hawthorns with different degrees of human management. The objective of this study was to assess the biodiversity of this valuable collection from morphological, molecular (microsatellite), and ethnobotanical viewpoints in order to delineate the most adequate strategy for the conservation of the native hawthorn germplasm in the present scenario of incipient establishment of commercial hawthorn plantations, which is likely to increase. Molecular characterisation revealed that the biodiversity was chiefly (90%) placed within the regions. Morphological characterisation indicated that the group from Chiapas was the most different germplasm pool compared with the other five. This was confirmed by molecular analysis, because in spite of the lack of a phylogeographical pattern, two germplasm pools were detected: one composed mainly by accessions from Chiapas and the other mainly by accessions from the other regions. The only clear differences among the regions in the ethnobotanical study were those derived from putting hawthorns into commercial cultivation, which occurred in just one region in the centre of the country (Mexico–Puebla–Tlaxcala). As a consequence, an ex situ conservation programme is necessary for those regions shifting patterns of cultivation from traditional to commercial, regardless of whether other on-farm programmes are also implemented. The germplasm collections within each region must be exhaustive due to their high genetic diversity.     

The geographic origin of old Douglas-fir stands growing in Central Europe

Since the nineteenth century, Douglas-fir seed sources have been widely used for establishment of forest stands outside its natural distribution range. In Europe, some of these old Douglas-fir stands are registered as seed stands and provide seed sources for nurseries, although it is unclear from which region in North America they originate. In recent years, the interest in planting Douglas-fir has increased substantially because the species is seen as a potential adaptation option to climate change. This makes the assignment of European Douglas-fir stands of unknown seed origin to their geographic origin in North America increasingly important, because the genetic quality of these plantations must be guaranteed. In this study, we use 13 nuSSR loci to investigate the origin of 67 Austrian and German Douglas-fir stands of unknown origin. We performed a hierarchical Bayesian cluster analysis using 38 native Douglas-fir populations. The resulting clusters are used as reference populations to assign the 67 Central European Douglas-fir stands from Austria and Germany planted more than 80 years ago. Our results suggest that the majority of our investigated Douglas-fir stands come from central Washington (USA), the recommended seed zones for Central Europe. Some stands were located outside the suggested area, e.g. central Oregon and Santa Fe (New Mexico). The accuracy assessment of our approach revealed the best performance for the highest hierarchical level, e.g. assigning populations either to the coastal or the Rocky Mountain variety. As expected, the uncertainty increases with decreasing hierarchical level. The final assessment, if an admixture of seed sources within the European Douglas-fir stands is evident suggests that 23 of the Douglas-fir stands show an admixture which was not detected in our Douglas-fir reference populations growing in the natural distribution range.