Diversity and distribution of Victoria Land biota

Understanding the relationship between soil biodiversity and ecosystem functioning is critical to predicting and monitoring the effects of ecosystem changes on important soil processes. However, most of Earth's soils are too biologically diverse to identify each species present and determine their functional role in food webs. The soil ecosystems of Victoria Land (VL) Antarctica are functionally and biotically simple, and serve as in situ models for determining the relationship between biodiversity and ecosystem processes. For a few VL taxa (microarthropods, nematodes, algae, mosses and lichens), species diversity has been intensively assessed in highly localized habitats, but little is known of how community assemblages vary across broader spatial scales, or across latitudinal and environmental gradients. The composition of tardigrade, rotifer, protist, fungal and prokaryote communities is emerging. The latter groups are the least studied, but potentially the most diverse. Endemism is highest for microarthropods and nematodes, less so for tardigrades and rotifers, and apparently low for mosses, lichens, protists, fungi and prokaryotes. Much of what is known about VL diversity and distribution occurs in an evolutionary and ecological vacuum; links between taxa and functional role in ecosystems are poorly known and future studies must utilize phylogenetic information to infer patterns of community assembly, speciation, extinction, population processes and biogeography. However, a comprehensive compilation of all the species that participate in soil ecosystem processes, and their distribution across regional and landscape scales is immediately achievable in VL with the resources, tools, and expertise currently available. We suggest that the soil ecosystems of VL should play a major role in exploring the relationship between biodiversity and ecosystem functioning, and in monitoring the effects of environmental change on soil processes in real time and space.     

Necrotizing Enterocolitis in Horses: A Retrospective Study

The clinical and clinicopathologic characteristics of fatal necrotizing enterocolitis were examined in 16 horses (age 4 months to 12 years). At initial presentation, 8 of 16 horses were pyrexic (median temperature, 38.4°C; range, 33.8 to 40.6°C); all 16 were tachycardic (median heart rate, 93 bpm, range, 66 to 138 bpm); 13 of 16 were tachypneic (median heart rate, 36 bpm, range, 16 to 80 bpm), dehydrated, and had discolored mucous membranes. All horses that were pyrexic were also tachycardic and tachypneic. PCV was high (>45%) in 14 horses. Six horses were leukopenic (<5,000 cells/μL); 12 were neutropenic (<2,300 cells/μL), and 14 had >100 band neutrophils/μL. Twelve horses were acidemic (pH 7.37; range, 6.88 to 7.33) and the venous bicarbonate concentration was low (<23 mEq/L) in 14 horses. Median anion gap in 16 horses was 31.5 mEq/L (>15 mEq/L in 15 horses). Eleven of 16 horses were hyponatremic (<137 mEq/L), 1 horse was hypernatremic (> 143 mEq/L), 3 were hypoka-(emic (<3.2 mEq/L), 6 were hyperkalemic (>4.5 mEq/L), and 14 were hypochloremic (<98 mEq/L). Serum creatinine concentrations were high (>1.4 mg/dL) in 15 horses. Abdominal fluid was examined in 12 horses: 4 had total protein concentrations 2.5 g/dL and 6 had nucleated cell counts >5,000/μL and <10,000/μL; none had >10,000/μL. Eight of 12 samples revealed a nondegenerate neutrophilia (>50%). Abdominal fluid collected from 4 horses immediately before death was normal in 2 horses and indicative of suppurative inflammation in 2. All 8 horses tested had low or nonexistent serum immunofluorescent antibody titers to Ehrlichia risticii. Four of 16 horses had Salmonella spp isolated from feces or tissues. All 16 horses either died (5 of 16; 31%) or were euthanized because of a grave prognosis. Median time to death was 45.5 hours (range, 7 to 113 hours) from the time of admission. Death was preceded by severe abdominal pain in 14 horses. Fatal necrotizing enterocolitis of horses is characterized by a brief course, profound dehydration, electrolyte derangements, acid-base abnormalities, and terminally, severe abdominal pain. Abdominal fluid analysis was frequently not indicative of the severity of disease. J Vet Intern Med 1996;10:265–270. Copyright©1996 by the American College of Veterinary Internal Medicine.     

Antigenic comparison of Lelystad virus and swine infertility and respiratory syndrome (SIRS) virus.

This study reports the antigenic relatedness of isolates of Lelystad virus collected in the Netherlands, Germany, and the United States. The binding of antibodies directed against these isolates was tested in a set of field sera collected during outbreaks of porcine epidemic abortion and respiratory syndrome in Europe and outbreaks of swine infertility and respiratory syndrome (SIRS) in North America. Two sets of sera from pigs experimentally infected with Lelystad virus or SIRS virus were also tested. Although all 7 isolates reacted with anti-Lelystad virus sera, antigenic variation was considerable. The 4 European isolates resembled each other closely, but differed from the American isolates, and the 3 American isolates differed antigenically from each other. To reliably diagnose Lelystad virus infection, a common antigen must first be identified.     

Legumes symbioses: absence of Nod genes in photosynthetic bradyrhizobia

Leguminous plants (such as peas and soybeans) and rhizobial soil bacteria are symbiotic partners that communicate through molecular signaling pathways, resulting in the formation of nodules on legume roots and occasionally stems that house nitrogen-fixing bacteria. Nodule formation has been assumed to be exclusively initiated by the binding of bacterial, host-specific lipochito-oligosaccharidic Nod factors, encoded by the nodABC genes, to kinase-like receptors of the plant. Here we show by complete genome sequencing of two symbiotic, photosynthetic, Bradyrhizobium strains, BTAi1 and ORS278, that canonical nodABC genes and typical lipochito-oligosaccharidic Nod factors are not required for symbiosis in some legumes. Mutational analyses indicated that these unique rhizobia use an alternative pathway to initiate symbioses, where a purine derivative may play a key role in triggering nodule formation.     

Phosphorus excretion by mares post-lactation

Across the equine literature, estimates of true P digestibility range from −23% to 79%. This large range cannot be explained by differences in P intake or phytate-P intake alone. However, differences in endogenous P secretion into the GI tract may explain the variation. In horses, excess absorbed P is not excreted in the urine but is re-secreted into the GI tract, increasing faecal P and leading to estimates of low P digestibility. Thus, accurate estimates of P digestibility can only be obtained if absorbed P is retained in the horse. The objective of this study was to examine P digestibility in post-lactational mares and control mares that were fed similar amounts of P. It was hypothesized that post-lactational mares would have greater P retention and higher apparent P digestibility than control mares. Prior to the study, four lactating and four non-lactating mares were fed a diet that provided 100% of the control mares’ P requirement, but only 55% of the lactating mares’ P requirement. During the study, both groups were fed P at the rate recommended for non-lactating mares. Post-lactational mares did not retain more P than control mares but tended to excrete more P than control mares (p = .082), presumably due to differences in endogenous P secretion into the GI tract. Metabolic changes occurring during mammary gland involution may have contributed to the increase in P excretion. However, faecal P excretion exceeded P intake in both groups (p = .08) and both groups lost weight during the study. Tissue mobilization during weight loss may have influenced P secretion into the GI tract.     

A practical toolbox for design and analysis of landscape genetics studies

Landscape genetics integrates theory and analytical methods of population genetics and landscape ecology. Research in this area has increased in recent decades, creating a plethora of options for study design and analysis. Here we present a practical toolbox for the design and analysis of landscape genetics studies following a seven-step framework: (1) define the study objectives, (2) consider the spatial and temporal scale of the study, (3) design a sampling regime, (4) select a genetic marker, (5) generate genetic input data, (6) generate spatial input data, and (7) choose an analytical method that integrates genetic and spatial data. Study design considerations discussed include choices of spatial and temporal scale, sample size and spatial distribution, and genetic marker selection. We present analytical methods suitable for achieving different study objectives. As emerging technologies generate genetic and spatial data sets of increasing size, complexity, and resolution, landscape geneticists are challenged to execute hypothesis-driven research that combines empirical data and simulation modeling. The landscape genetics framework presented here can accommodate new design considerations and analyses, and facilitate integration of genetic and spatial data by guiding new landscape geneticists through study design, implementation, and analysis.