Repeated sublethal freshwater exposures reduce the amoebic gill disease parasite,Neoparamoeba perurans,on Atlantic salmon

Freshwater bathing is one of the main treatment options available against amoebic gill disease (AGD) affecting multiple fish hosts in mariculture systems. Prevailing freshwater treatments are designed to be long enough to kill Neoparamoeba perurans, the ectoparasite causing AGD, which may select for freshwater tolerance. Here, we tested whether using shorter, sublethal freshwater treatment durations are a viable alternative to lethal ones for N. perurans (2–4 hr). Under in vitro conditions, gill‐isolated N. perurans attached to plastic substrate in sea water lifted off after ≥2 min in freshwater, but survival was not impacted until 60 min. In an in vivo experiment, AGD‐affected Atlantic salmon Salmo salar subjected daily to 30 min (sublethal to N. perurans) and 120 min (lethal to N. perurans) freshwater treatments for 6 days consistently reduced N. perurans cell numbers on gills (based on qPCR analysis) compared to daily 3 min freshwater or seawater treatments for 6 days. Our results suggest that targeting cell detachment rather than cell death with repeated freshwater treatments of shorter duration than typical baths could be used in AGD management. However, the consequences of modifying the intensity of freshwater treatment regimes on freshwater tolerance evolution in N. perurans populations require careful consideration.     

Marked induction of IL-6, haptoglobin and IFNgamma following experimental BRSV infection in young calves

Bovine respiratory syncytial virus (BRSV) has been identified worldwide as an important pathogen associated with acute respiratory disease in calves. An infection model has been developed reflecting accurately the clinical course and the development of pathological signs during a natural BRSV-infection. In the experiments described in the present study, calves were infected at 13-21 weeks of age and reinfected 14 weeks later. Blood samples from the entire infection period were analysed for acute phase protein (haptoglobin) by ELISA and for expression (mRNA level in peripheral blood mononuclear cells) of the cytokines interleukin-2 (IL-2), interleukin-4 (IL-4), interleukin-6 (IL-6) and interferon-gamma (IFNgamma) by quantitative real-time reverse transcribed polymerase chain reaction (RT-PCR). IFNgamma, interleukin-6 and haptoglobin were markedly induced together with development of clinical signs in response to the first infection with BRSV. The IFNgamma response was biphasic, with an early peak at day 1-3 post infection (p.i.) and a later increase between day 5 and 8 p.i. Reinfection also resulted in an induction of IFNgamma, but without induction of clinical signs, IL-6 and haptoglobin. These results indicate that early mediators connected with the innate responses are induced on a first encounter with the pathogen, but not on a second encounter (reinfection) where the adaptive immune system may act as the first line defence.     

Identification of Sources of Resistance to Phoma medicaginis Isolates in Medicago truncatula SARDI Core Collection Accessions, and Multigene Differentiation of Isolates

ABSTRACT Phoma medicaginis is a necrotrophic fungal pathogen, commonly found infecting the annual medic Medicago truncatula. To differentiate eight P. medicaginis isolates, five gene regions were examined: actin, beta-tubulin, calmodulin, translation elongation factor 1-alpha (EF-1alpha), and the internal transcribed spacer ribosomal DNA. Sequence comparisons showed that specimens isolated from M. truncatula in Western Australia formed a group that was consistently different from, but allied to, a P. medicaginis var. medicaginis type specimen. EF-1alpha contained a hyper-variable 55-bp repeat unit, which forms the basis of a rapid polymerase chain reaction-based method of reliably distinguishing isolates. Characterization of three isolates showed that all exhibited a narrow host range, causing disease only in M. sativa and M. truncatula among eight commonly cultivated legume species sampled. Infection of 86 M. truncatula single-seeded accessions showed a continuous distribution in disease phenotypes, with the majority of accessions susceptible. On a 1-to-5 disease reaction scale increasing in severity, individual fungal isolates showed means of 2.6 to 3.2, and scores ranged from 1 to 4.8 among accessions. The results presented here suggest that M. truncatula harbors specific and diverse sources of resistance to individual P. medicaginis genotypes.     

Different clinical,virological, serological and tissue tropism outcomes of two new and one old Belgian type 1 subtype 1 porcine reproductive and respiratory virus (PRRSV) isolates

In this study, the pathogenic behavior of PRRSV 13V091 and 13V117, isolated in 2013 from two different Belgian farms with enzootic respiratory problems shortly after weaning in the nursery, were compared with the Belgian strain 07V063 isolated in 2007. Full-length genome sequencing was performed to identify their origin. Twelve weeks-old pigs were inoculated intranasally (IN) with 13V091, 13V117 or 07V063 (9 pigs/group). At 10 days post inoculation (dpi), 4 animals from each group were euthanized and tissues were collected for pathology, virological and serological analysis. 13V091 infection resulted in the highest respiratory disease scores and longest period of fever. Gross lung lesions were more pronounced for 13V091 (13%), than for 13V117 (7%) and 07V063 (11%). The nasal shedding and viremia was also most extensive with 13V091. The 13V091 group showed the highest virus replication in conchae, tonsils and retropharyngeal lymph nodes. 13V117 infection resulted in the lowest virus replication in lymphoid tissues. 13V091 showed higher numbers of sialoadhesin⁻ infected cells/mm² in conchae, tonsils and spleen than 13V117 and 07V063. Neutralizing antibody response with 07V063 was stronger than with 13V091 and 13V117. It can be concluded that (i) 13V091 is a highly pathogenic type 1 subtype 1 PRRSV strain that replicates better than 07V063 and 13V117 and has a strong tropism for sialoadhesin⁻ cells and (ii) despite the close genetic relationship between 13V117 and 07V063, 13V117 has an increased nasal replication and shedding, but a decreased replication in lymphoid tissues compared to 07V063.

Electronic supplementary material

The online version of this article (doi:10.1186/s13567-015-0166-3) contains supplementary material, which is available to authorized users.     

Alternate partial root-zone irrigation improves fertilizer-N use efficiency in tomatoes

The objective of this study was to investigate the comparative effects of alternative partial root-zone irrigation (PRI) and deficit irrigation (DI) on fertilizer-N use efficiency in tomato plants under mineral N and organic N fertilizations. The plants were grown in split-root pots in a climate-controlled glasshouse and were subjected to PRI and DI treatments during early fruiting stage. When analyzed across the N fertilizer treatments, PRI treatment led to significantly higher N yield, agronomic N use efficiency (ANUE), and apparent N recovery efficiency (ANRE) as compared with the DI treatment, indicating significantly higher fertilizer-N use efficiency and soil N availability as well as enhanced plant’s N acquisition ability in the PRI treatment. Analysis across the irrigation treatments showed that the mineral N fertilizer treatment (MinN) significantly increased N yield, ANUE and ANRE relative to the organic N fertilizer treatment (OrgN). Compared with DI, the rhizosphere and bulk soil mineral N content in the soil were significantly lowered in the PRI treatment, indicating the enhanced root N uptake efficiency. It is suggested that PRI-enhanced soil water dynamics may have increased soil nitrate mass/diffusive flow to the root surfaces and root N uptake efficiency in the wetting soil and stimulated soil N mineralization and plant N demand, contributing to the improved fertilizer-N use efficiency in the PRI relative to the DI treatment.     

Growth and thinning effects during a rotation period of hybrid aspen in southern Sweden

Hybrid aspen is an interesting tree species for wood production in northern Europe. In this study we examined growth dynamics over the whole rotation period. Height and diameter development, as well as annual growth of stem volume and stem biomass, were repeatedly recorded in 14 planted and 2 root sucker stands, aged up to 26 years, in southern Sweden. A main aim was to study the productivity level for hybrid aspen forestry with an expected rotation period of about 25 years. The study verified earlier prognoses, showing a mean annual increment (MAI) of 19.5 m³ of stem wood ha^?1 yr^?1 after 25 years. This corresponds to a dry weight of stem biomass of 7.2 tons dry matter (DM) ha^?1 yr^?1. Maximum MAI was still not reached after 25 years, although the growth curve was flattening out. If branch biomass is included, MAI is estimated to about 9 tons DM ha^?1 yr^?1 and further improvements in growth is expected by using the best genotypically selected clones available. Results from three different thinning regimens showed that thinning intensity provided significantly larger diameter growth, while no significant yield effects were seen among the thinning regimens.     

Litterfall and nutrient return in five tree species in a common garden experiment

Canopy litterfall is a significant pathway for return of nutrients and carbon (C) to the soil in forest ecosystems. Litterfall was studied in five even-aged stands of Norway spruce, Sitka spruce, Douglas-fir, European beech and common oak at three different locations in Denmark; two sandy sites, Ulborg and Lindet in Jutland, and one loamy site, Frederiksborg on Zealand. Litterfall was collected during three years from 1994 to 1996 in all five species and during six years from 1994 to 1999 in Norway spruce, Sitka spruce and European beech. The average total litterfall was in the range of 3200–3700 kg ha⁻¹ yr⁻¹ and did not differ significantly among tree species. There were no significant differences in total litterfall among sites during the short period, but during the longer period the richer site Frederiksborg had significantly higher total and foliar litterfall amounts compared to the more nutrient-poor sites Lindet and Ulborg. There were close relationships between foliar and total litterfall suggesting that foliar litterfall can be reliably estimated from total litterfall. Beech and oak bud scale litter was significantly related to foliar litterfall. The amount of branch and twig litter was significantly higher in oak than in other tree species. The average foliar litterfall was well related to the annual volume increment. The relationship differed markedly from previously reported relationships based on global litterfall data suggesting that such relationships are better evaluated at the regional level. Nutrient concentrations and fluxes in foliar litterfall were not significantly different among the five tree species. However, there was a significant effect of site on most nutrient concentrations of the three litterfall fractions, and foliar fluxes of P, Ca and Mn were all significantly highest at Frederiksborg and lowest at Ulborg. The similarity in litterfall inputs to the forest floor under these five tree species suggested that previous reports of large variability in forest floor accumulation should primarily be attributed to differences in litter decomposition.     

Concentrations and fluxes of dissolved organic carbon and nitrogen in a Picea abies chronosequence on former arable land in Sweden

Shifting land use from agriculture to forestry induces major changes in the carbon (C) and nitrogen (N) cycles, including fluxes of dissolved organic carbon (DOC) and nitrogen (DON). This study investigated the long-term effects of afforestation on ecosystem DOC and DON dynamics using a chronosequence approach comprising four arable fields and nine differently aged (10–92 years) Norway spruce stands growing on similar former arable soils in the same area. Along the chronosequence, concentrations and fluxes of DOC and DON were determined in bulk precipitation, throughfall, O horizon leachate and mineral soil solution during a 2–3-year period. Soil water fluxes were calculated using a soil hydrological model (SWAP). Results showed that DOC concentrations and fluxes with throughfall were strongly positively correlated with tree height (r² = 0.95; P < 0.05 for both conc. and flux) and stand age, while DON showed no such trends, suggesting different origins of DOC and DON in throughfall. The highest concentrations and fluxes of DOC and DON occurred in soil leachate from the O horizon. Here, DOC flux was 250–310 kg C ha⁻¹ yr⁻¹ and DON flux 8–9 kg N ha⁻¹ yr⁻¹ in stands afforested between 65 and 92 years ago. Concentrations and fluxes of DOC and DON in the mineral subsoil were consistently low. Flux calculations suggest that there was a net loss of >90% (230–280 kg ha⁻¹ yr⁻¹) of DOC leached from the O horizon within 0–60 cm of the mineral soil. There was no significant effect of land use or forest age on DOC concentrations in solution from the lower part of the A horizon. The effect of time since afforestation was masked by soil properties that influence DOM retention in the mineral soil. Our data indicate that DOC concentrations in the A horizon of the sites studied were primarily related to the oxalate-extractable Al and Fe amounts in the same horizon. Afforestation of arable land induced a gradual qualitative change in soil organic matter (SOM) and dissolved organic matter (DOM), with significantly increasing C:N ratios in soil and soil solution over time. The development of an O horizon and the subsequent leaching of DOC and DON to the underlying mineral soil are important drivers of a changing soil C and N turnover following afforestation.