Resistance of wheat to Mycosphaerella graminicola involves early and late peaks of gene expression

Large-scale cDNA-AFLP profiling identified numerous genes with increased expression during the resistance response of wheat to the Septoria tritici blotch fungus, Mycosphaerella graminicola. To test whether these genes were associated with resistance responses, primers were designed for the 14 that were most strongly up-regulated, and their levels of expression were measured at 12 time points from 0 to 27 days after inoculation (DAI) in two resistant and two susceptible cultivars of wheat by real-time quantitative polymerase chain reaction. None of these genes was expressed constitutively in the resistant wheat cultivars. Instead, infection of wheat by M. graminicola induced changes in expression of each gene in both resistant and susceptible cultivars over time. The four genes chitinase, phenylalanine ammonia lyase, pathogenesis-related protein PR-1, and peroxidase were induced from about 10- to 60-fold at early stages (3 h–1 DAI) during the incompatible interactions but were not expressed at later time points. Nine other genes (ATPase, brassinosteroid-6-oxidase, peptidylprolyl isomerase, peroxidase 2, 40S ribosomal protein, ADP-glucose pyrophosphorylase, putative protease inhibitor, methionine sulfoxide reductase, and an RNase S-like protein precursor) had bimodal patterns with both early (1–3 DAI) and late (12–24 DAI) peaks of expression in at least one of the resistant cultivars, but low if any induction in the two susceptible cultivars. The remaining gene (a serine carboxypeptidase) had a trimodal pattern of expression in the resistant cultivar Tadinia. These results indicate that the resistance response of wheat to M. graminicola is not completed during the first 24 h after contact with the pathogen, as thought previously, but instead can extend into the period from 18 to 24 DAI when fungal growth increases dramatically in compatible interactions. Many of these genes have a possible function in signal transduction or possibly as regulatory elements. Expression of the PR-1 gene at 12 h after inoculation was much higher in resistant compared to susceptible recombinant-inbred lines (RILs) segregating for the Stb4 and Stb8 genes for resistance. Therefore, analysis of gene expression could provide a faster method for separating resistant from susceptible lines in research programs. Significant differential expression patterns of the defense-related genes between the resistant and susceptible wheat cultivars and RILs after inoculation with M. graminicola suggest that these genes may play a major role in the resistance mechanisms of wheat.     

Rural household and forest: an evaluation of household’s dependency on community forest in Nepal

The aim of this paper is to analyze the level of dependency of rural households on forests, based on the economic status of the households and the property regimes of forests. The analysis of household-level dependency suggests that large numbers of rural households are benefiting regularly from their community forests. Out of three forest property regimes examined, community forests were found to be the most prominent sources for supplying forest products to local households. Analysis of the degree of forest-products dependency and the economic status of households shows that the low economic status households rely more on the community forest than the economically better-off households. In addition, a ² analysis indicates that the economic status of households affects the degree of forest-product collection activities. The results show three types of property regime with respect to forest management in Chitwan. Each regime holds its own ownership rights, which control the harvesting of forest products and provides incentives to the local households.     

Response of tolerant breeding lines of tomato, Lycopersicon esculentum, originating from three different sources (L. peruvianum, L. pimpinellifolium and L. chilense) to early controlled inoculation by tomato yellow leaf curl virus (TYLCV)

Selection of tomato plants supposedly tolerant to tomato yellow leaf curl virus (TYLCV), based solely on the absence of symptoms in an infested field can be misleading. An inoculation routine was therefore established to avoid escapes and to overcome difficulties associated with the age of the plant at the time of infection. The inoculation routine was applied to a selection of resistant/tolerant individuals generated through a diallel F¹ cross and to F² segregating populations originating from three wild tomato species described as tolerant to TYLCV: Lycopersicon peruvianum EC 104395, Lycopersicon pimpinellifolium Hirsute and Lycopersicon chilense LA 1969. Clear differences were observed between susceptible symptomatic and tolerant symptomless tomato genotypes, indicating that the uncertainty resulting from escapes, from different levels of inoculum, and from the time of inoculation, can be eliminated. The genes involved in tolerance provided different levels of protection; combinations of various tolerant sources and levels in a single genotype gave a higher level of tolerance. Differences in level of protection were found between genes from the same source and between sources; none of the sources tested had complete dominance. The results obtained with the F² segregating population showed that tolerance from L. pimpinellifolium is controlled by one major gene, that from L. chilense by two genes, and that from L. peruvianum by three genes with no dominant effect. The combination of sources for resistance can thus have positive or negative synergistic effects, or no effect. We suggest that a maximal level of tolerance can be obtained by the additive effect of the partly dominant genes from L. pimpinellifolium and L. chilense.     

Optimization of lipase-catalyzed synthesis of ginsenoside Rb1 esters using response surface methodology

In the lipase (Novozyme 435)-catalyzed synthesis of ginsenoside Rb1 esters, different acyl donors were found to affect not only the degree of conversion but also the regioselectivity. The reaction of acyl donors with short carbon chain was more effective, showing higher conversion than those with long carbon chain. Among the three solvent systems, the reaction in tert-amyl alcohol showed the highest conversion rate, while the reaction in the mixed solvent of t-BuOH and pyridine (1:1) had the lowest conversion rate. To allow the increase of GRb1 lipophilicity, we decided to further study the optimal condition of synthesis of GRb1 with vinyl decanoate with 10 carbon chain fatty acids in tert-amyl alcohol. Response surface methodology (RSM) was employed to optimize the synthesis condition. From the ridge analysis with maximum responses, the maximum GRb1 conversion was predicted to be 61.51% in a combination of factors (40.2 h, 52.95 degrees C, substrate mole ratio 275.57, and enzyme amount 39.81 mg/mL). Further, the adequacy of the predicted model was examined by additional independent experiments at the predicted maximum synthesis conditions. Results showed that the RSM was effective to optimize a combination of factors for lipase-catalyzed synthesis of ginsenoside Rb1 with vinyl decanoate.     

Inheritance of the stem rust resistance phenotype Pg-a in oats

Forty stem rust resistant oat cultivars and lines were selected from Australian oat breeding programs, Quaker Oat Nurseries and a Brazilian oat collection. Most, including the Pg-a reference stock Omega, were crossed with a susceptible line in order to study the inheritance of resistance. Omega was crossed with 15 resistant selections and a further 15 intercrosses were made among resistant selections. All selected lines possessed Pg-a which was inherited as a pair of recessive complementary genes. All crosses among resistant lines failed to segregate. In the majority of resistant/susceptible crosses, the F2 ratio was 1 resistant: 2 intermediate: 13 susceptible, whereas in others it was 1 resistant: 15 susceptible. Progenies of plants with intermediate reactions always segregated. Although Kyto with Pg-12 was a parent of Omega, Pg-12 was not present in any resistant line and was not involved in the Pg-a response. The respective complementary genes were isolated in stem rust susceptible lines, which when intercrossed, segregated in F2 to produce resistant plants in the expected frequencies and with the typical Pg-a phenotype. The lack of effective genetic variability for stem rust resistance among important sources of germplasm used by Australian oat breeders is a major cause for concern.     

Resistance of tomato cultivars and progenies to fruit hollowness

Summary In field experiments with fall and winter tomatoes, the incidence of fruit hollowness was found to range from 0 to more than 80%, depending both on the cultivar and the environment. The most resistant cultivars were Bonner Beste and Potentate; the most susceptible were Exhibiton, Moneymaker, E.S. 1, Berco, Cromco and Ailsa Craig. The rate of hollowness of F₁ and F₂ generations of crosses between resistant and susceptible parents suggests that resistance behaves as a partially dominant character governed by a small number of genes. Thus, commercial F₁ hybrids resistant to the disorder are easy to produce. The heritability of the resistance character was found to be rather high.Contribution from The Volcani Institute of Agricultural Research, Bet Dagan, Israel. 1969 Series, No. 1558-E.     

Rice–wheat cropping system: tillage,mulch, and nitrogen effects on soil carbon sequestration and crop productivity

Maintenance of organic carbon in soil (SOC) is critically important for sustained agricultural productivity and environmental quality. This paper presents SOC resulting from differences in tillage types and demonstrates how mulch and nitrogen (N) application can mediate the tillage functions on SOC and crop productivities. The results are derived from a 4-year field-scale study carried out in a low-land under sub-tropical hot and humid environment of Nepal. It compared eight treatment combinations, viz., tillage (no-tillage and conventional tillage), mulch (no-mulch and 12 Mg ha^?1 year^?1 of mulch), and N application (recommended versus leaf color chart method) under rice–wheat cropping system. Seasonal grain and biomass yields of these crops were recorded and at the end of the 4-year study, quantified the organic carbon stock of soil; Within 15 cm of surface soil, SOC stock (Mg C ha^?1) was statistically (p < 0.05) higher on no-tillage plots (11.2–11.8) than on conventional tillage plots (9.2–10.5). The treatment effect was more pronounced on winter wheat productivity where conventional tillage combined with straw-mulch exceled the performance of no-tillage. Clearly, no-tillage had the environmental benefit, and conventional tillage had the crop productivity benefit.     

Carbon, nitrogen and phosphorus budget in shrimp (Penaeus monodon) culture ponds in eastern India

Nutrient budget for shrimp (Penaeus monodon) culture was performed in ten culture ponds (0.4–1.0 ha) in Orissa, India, at stocking density of 10.0–22.10/m². The average initial body weight of shrimps was 0.02 g. The culture period was for 4 months. Feed was the main input of nitrogen (N), phosphorus (P) and organic carbon (OC). The FCR varied from 1.35 to 1.75. At harvest time, the average weight of shrimps varied from 28 to 32 g. Total N, P and OC applied to these ponds through all the inputs ranged from 106.64 to 292.63, 23.17 to 57.55 kg and 763.10 to 1,831.20 kg per crop, respectively. Feed alone accounted for 94.43–95.03 % total N, 91.92–95.36 % total P and 80.33–92.48 % total OC, respectively. The harvest of shrimp accounted for recovery of 25.45–36.88 (av. 30.12) %, 10.07–12.94 (av. 11.16) % and 15.80–20.81 (av. 18.01) % of added N, P and OC, respectively. N, P and OC accumulated in sediment were 49.11, 64.07 and 64.82 %, respectively, of total nutrient retention in the culture system. Unaccounted N, P and OC were 13.29, 21.83 and 18.14 %, respectively, of the total nutrient retention in the system. N, P and OC outputs in the discharged water during harvest were 7.48, 2.94 and 2.03 %, respectively.     

Responses of maize × teosinte derived backcross inbred lines (BILs) to maydis leaf blight (MLB) disease

Euphytica - Rice growth and productivity are greatly affected by cold stress, which is likely to become more of a hindrance for high and stable rice yields. To identify cold tolerance at the...