Discovery of c-SNPs in Anemone coronaria L. and Assessment of Genetic Variation

Single nucleotide polymorphisms (SNPs) were discovered in 44 cDNA clones from leaves by comparison of the commercial cultivar ‘Mona Lisa‘ with a wild population of Anemone coronaria L. One hundred and fifty five SNPs were discovered with an average frequency of one SNP per 167 bp. Forty nine percent of the SNPs are transitions, 43 are transversions, 26 are heterozygotes and 9% are InDels. Eighty two (68%) of the SNPs located in the ORF, resulted in a change of amino acid while 39 (32%) did not affect the amino acid. Thirty eight SNPs (46%), which change the amino acid, resulted in similar amino acid, while 44 SNPs (54%) resulted in a non-similar amino acid. Nine polymorphic sites were genotyped by matrix assisted laser desorption/ionization time of flight mass spectrometry (MALDI-TOF MS) using genomic DNA. Phylogenetic analysis of 50 individuals from six wild populations and the commercial cultivar revealed high polymorphism within and low polymorphism between A. coronaria L. wild populations. The phylogenetic tree revealed only one clear cluster of the ‘Mona Lisa’ cultivar. All the other individuals from the various wild populations are distributed on different nodes indicating that the genetic variation within the wild populations is high while the commercial cultivar is quite homogenous and genetically different from all other populations.     

The effect of various residue mulch-tillage combinations on soil physical conditions and performance of irrigated cotton

Cotton is a major irrigated summer field crop in Israel, and is commonly grown in the same field for 3–5 years in succession. There is only a narrow time window between harvest and early rains for pest control by means of clearing the land surface of residues, and to perform preparatory tillage. The time available may be insufficient to achieve this with the conventional deep plowing tillage system, and some operations may have to be carried out on moist soil between rainfall events. In response to indications of decreasing yield due to compaction, various limited-tillage systems in permanent traffic lanes have been developed, culminating in a machine that performs all residue-disposal and tillage operations in a single pass through the field. A comparison of several limited-traffic and conventional practices was carried out for 2 years on a loessial silt loam (Calcic Haploxeralf). It was found that both soil condition and yield were worst in the two treatments commonly used by farmers: deep plowing and deep incorporation of residues with the combination machine. Tillage effects were dominant, masking any effect of residue amount and disposal method. Large differences were found between the zones of the permanent wheel track treatments, as were cyclic changes in soil condition reflecting the seasonal sequence of tillage operations. Some cumulative compaction occurred, due mainly to a gradual widening of the wheel tracks rather than to repeated passes in the original rut. The findings of this work show that the optimal choice is to replace the previously preferred field practices by shallow slot-mulching with simultaneous subsoiling by the combination machine, which meets the sanitation requirements, maintains satisfactory yields and saves energy and labor.     

Sensitivity analysis of optimal operation of irrigation supply systems with water quality considerations

A model for optimal operation of water supply/irrigation systems of various water quality sources, with treatment plants, multiple water quality conservative factors, and dilution junctions is presented. The objective function includes water cost at the sources, water conveyance costs which account for the hydraulics of the network indirectly, water treatment cost, and yield reduction costs of irrigated crops due to irrigation with poor quality water. The model can be used for systems with supply by canals as well as pipes, which serve both drinking water demands of urban/rural consumers and field irrigation requirements. The general nonlinear optimization problem has been simplified by decomposing it to a problem with linear constraints and nonlinear objective function. This problem is solved using the projected gradient method. The method is demonstrated for a regional water supply system in southern Israel that contains 39 pipes, 37 nodes, 11 sources, 10 agricultural consumers, and 4 domestic consumers. The optimal operation solution is described by discharge and salinity values for all pipes of the network. Sensitivity of the optimal solution to changes in the parameters is examined. The solution was found to be sensitive to the upper limit on drinking water quality, with total cost being reduced by 5% as the upper limit increases from 260 to 600 mg Cl l^–1. The effect of income from unit crop yield is more pronounced. An increase of income by a factor of 20 results in an increase of the total cost by a factor of 3, thus encouraging more use of fresh water as long as the marginal cost of water supply is smaller than the marginal decrease in yield loss. The effect of conveyance cost becomes more pronounced as its cost increases. An increase by a factor of 100 results in an increase of the total cost by about 14%. The network studied has a long pipe that connects two distinct parts of the network and permits the supply of fresh water from one part to the other. Increasing the maximum permitted discharge in this pipe from 0 to 200 m³ h^–1 reduces the total cost by 11%. Increasing the maximum discharge at one of the sources from 90 to 300 m³ h^–1 reduces the total cost by about 8%.     

Rates of decomposition of plant residues and available nitrogen in soil, related to residue composition through simulation of carbon and nitrogen turnover

The dynamics of inorganic N in soil following the application of plant residues depends on their composition. We assumed that all plant materials are composed of similar components, each decomposing at a specific rate, but differ in the proportions of the various components. The NCSOIL model that simulates C and N turnover in soil was used to link the rates of residue decomposition to their composition, defined as soluble, cellulose-like and lignin-like C and N, and thereby integrate short and long-term effects of residues on available N dynamics in soil. Five plant residues in a wide range of C:N ratios were incubated in soil for 24 weeks at 30 °C, during which C and N mineralization were measured. The materials with large C:N ratios (corn, rice hulls and wheat straw) were also incubated with NH₄⁺-N to avoid N deficiency. The residues were analyzed for total and soluble C and N. The partitioning of insoluble C and N between cellulose- and lignin-like pools was optimized by best fit of simulated C and N mineralization to measured results. The decomposition rate constants of the soluble and lignin-like pools were assumed to be 1.0 and 10⁻⁵ d⁻¹, respectively, and that of the cellulose-like pool, obtained by model optimization against mineralization of cellulose with NH₄⁺-N in soil, was 0.051 d⁻¹. The optimized, kinetically defined lignin-like pool of all residues was considerably larger than lignin contents normally found in plant residues by the Van Soest procedure. Gross N mineralization of tobacco and rape residues was similar, but N recovery from tobacco was larger, because a larger fraction of its C was in the lignin-like pool. N in rice hulls, corn and wheat residues was mostly recalcitrant, yet rice hulls did not cause N deficiency, because most of its C was recalcitrant too. The soluble components of the residues had strong short-term effects on available N in soil, but the cellulose-like pool was equally important for short and medium-term effects. Soluble and cellulose-like C were 29 and 42% of total C, respectively, in corn and 7 and 50% in wheat. Maximal net inorganic N losses, measured in both residue treatments after 2 weeks, were 42 mg g⁻¹ C applied as corn and 31 mg g⁻¹ C applied as wheat, or 84 and 110 mg g⁻¹ decomposed C of corn and wheat, respectively. Rice hulls immobilized N slowly, but by the end of 24 weeks all three residues immobilized 26-27 mg N kg⁻¹ C applied. The different dynamics of N immobilization demonstrated the need to determine the decomposability of C and N rather than their total contents in plant residues.     

Risk factors associated with development of postoperative ileus in horses.

OBJECTIVE: To determine risk factors associated with development of postoperative ileus in horses undergoing surgery for colic. DESIGN: Case-control study. ANIMALS: 69 horses that developed ileus after surgery for colic and 307 horses that did not develop postoperative ileus. PROCEDURE: Signalment, history, clinicopathologic data, treatment, lesions, and outcome were obtained from medical records. RESULTS: Variables associated with increased risk of postoperative ileus included age > 10 years, Arabian breed, PCV > or = 45%, high serum concentrations of protein and albumin, anesthesia > 2.5 hours' duration, surgery > 2 hours' duration, resection and anastomosis, and lesions in the small intestine. Enterotomy reduced the risk of postoperative ileus. After multivariate logistic regression, the final model included the variables Arabian breed, PCV > or = 45%, lesion type, duration of surgery (> 2 hours vs < or = 2 hours), and pelvic flexure enterotomy. CONCLUSIONS AND CLINICAL RELEVANCE: Results suggest that by evaluating certain factors, horses at increased risk of postoperative ileus may be recognized before the condition develops. Preventative treatment and early intervention may be instituted in these horses. Shortening surgery time and performing an enterotomy may decrease the probability of horses developing postoperative ileus.     

Decay control and fungicide residues in citrus fruits seal-packed in a high-density polyethylene film

The effects of a new packaging method of sealing individual fruits in film of highdensity polyethylene (HDPE), on decay control and the residue levels of various fungicides applied to the fruit, were investigated with four different citrus cultivars. HDPE seal-packaging by itself reduced the decay of Marsh grapefruit but slightly enhanced the decay of Valencia orange fruit in comparison with conventionally handled fruit. Seal-packaging of individual fruit resulted in much less decay than sealing a whole carton of fruit together. The fungicides imazalil, sec-butylamine, 2-phenylphenol, benomyl and thiabendazole markedly reduced the decay of sealed fruit in all cultivars of citrus fruits tested. Residue levels in treated fruit were below the tolerances permitted. The new method of packaging had no effect on the residue levels of benomyl, 2-phenyl-phenol and thiabendazole in the fruit; neither did it affect the extent of absorption of these fungicides into the fruit. Only the volatile fungicide sec-butylamine was found at a higher level (73% higher in the packaged fruit compared with conventionally treated fruit).     

Differential inhibition of potassium ion absorption by difenzoquat in wild oat and cereals

Over a concentration range of 5.0 × 10^?6?7.5 × 10^?4M, the selective herbicide difenzoquat (1,2-dimethyl-3,5-diphenyl-1H-pyrazolium) caused more pronounced inhibition of potassium ion (K⁺) absorption by excised seedling roots of susceptible wild oat (Avena fatua L.) compared to those of tolerant barley (Hordeum vulgare L. cv. Bonanza) or wheat (Triticum aestivum L. cv. Neepawa). At 2.5 × 10^?5M difenzoquat, the relative inhibition of K⁺ (⁸⁶Rb) absorption by wild oat root segments inceased from 30% with a 10-min uptake period to 75% with an uptake period of 90 min, whereas no inhibition at all was evident for wheat root segments even after a 90-min exposure to the herbicide. An ion efflux compartmental analysis procedure demonstrated that difenzoquat did not affect the passive permeability properties of the plasma membrane of wild oat root cells. The experimental findings indicated that difenzoquat interfered directly with the process of active ion transport across the plasma membrane of root cells.     

Antiviral effect of a factor from TMV-infected plants on the inoculativity of an insect vector

The capacity of whiteflies (Bemisia tabaci) to acquire and transmit tomato yellow leaf curl virus successfully is reduced if the insect is membrane-fed on a solution of an antiviral factor (AVF) from virus-infected plants. Whiteflies are known to have a native protective mechanism, involving at least two different factors. AVF was shown to act via the same pathway as the above-mentioned protective mechanism, since at least one of the above factors was induced in the insect body by AVF even in virus-free insects