Small Area Estimation of Proportions with Constraint for National Resources Inventory Survey

Motivated by the need to produce small area estimates for the National Resources Inventory survey, we develop a spatial hierarchical model based on the generalized Dirichlet distribution to construct small area estimators of compositional proportions in several mutually exclusive and exhaustive landcover categories. At the observation level, the standard design-based estimators of the proportions are assumed to follow the generalized Dirichlet distribution. After proper transformation of the design-based estimators, beta regression is applicable. We consider a logit mixed model for the expectation of the beta distribution, which incorporates covariates through fixed effects and spatial effect through a conditionally autoregressive process. In a design-based evaluation study, the proposed model-based estimators are shown to have smaller root-mean-square error and relative root-mean-square error than design-based estimators and multinomial model-based estimators. Supplementary materials accompanying this paper appear online.     

Autochthonous probiotic as growth promoter and immunomodulator for Astyanax bimaculatus cultured in water recirculation system

This work aimed to evaluate the probiotic Lactobacillus spp. in the microbiota of Astyanax bimaculatus reared in a water recirculation system. The experiment was randomized, using 800 postlarvae distributed into eight polyethylene containers, separated into two treatments, in quadruplicate: supplementation with Lactobacillus spp. (Probiotic) and no supplementation (Control). After 90 days of culture, 13 fish per container were anaesthetized. Three of these underwent microbiological evaluation, and haematological analyses were carried out on five. Immunological assessment was performed on another five fish. Zootechnical parameters were evaluated for all animals. In the microbiological evaluation, the probiotic group presented higher counts of lactic acid bacteria, but lower counts of Vibrio spp., Pseudomonas spp., and Staphylococcus spp., when compared with control. After haematological analysis, the supplemented group presented low haematimetric indices of Mean Corpuscular Haemoglobin Concentration and Mean Corpuscular Haemoglobin (MCHC and MCH, respectively) and higher amounts of total leucocytes, thrombocytes and circulating monocytes when compared with control. The immunological profile did not differ between treatments. In the zootechnical performance, probiotic group presented higher productivity, survival and apparent food efficiency when compared with control. Therefore, when Lactobacillus spp. was supplemented in the diet of A. bimaculatus, immunocompetence and the zootechnical performance of animals increased.     

Availability of minerals in rendered meat and bone meal for Nile tilapia: Preliminary observations

A digestibility trial was conducted with 180 Nile tilapia (32.65 ± 4.52 g) fed a reference diet containing 350 g/kg crude protein and 4,500 kcal/kg gross energy. Five different meat and bone meals (MBMs) were evaluated. The test diets compound by 70% of reference diet and 30% of each MBM were elaborated and classified according to ash content: MBM‐430, MBM‐400, MBM‐370, MBM‐340 and MBM‐310. The apparent availability coefficient (AAC) of minerals and the apparent digestibility coefficient (ADC) of dry matter (DM) were subjected to one‐way analysis of variance (p < .05). Differences among ADC and AAC were determined by Tukey's multiple range test (p < .05). When appropriate, a polynomial regression analysis was performed. Linear correlation analyses between MBM chemical composition and the AAC and ADC were performed (p < .01). Higher values of ADC_DM, AAC_Ca and AAC_P were observed in MBM‐310, while low values were observed in MBM‐430. Quadratic effects of ash, P and Ca contents on AAC_Ca, AAC_P and ADC_DM were observed. The AAC_Ca, AAC_P and ADC_DM indicated a negative correlation with ash, P and Ca contents. MBM‐310 exhibited the highest mineral AAC, which could be used as a mineral source for Nile tilapia.     

Overall development of a bioprocess for the outdoor production of Nannochloropsis gaditana for aquaculture

In this paper, a systematic methodology is shown for the scaling‐up of Nannochloropsis gaditana production for aquaculture uses. First, an adequate culture medium was developed, prepared using fertilizers instead of pure chemicals. Subsequently, the performance of N. gaditana was modelled as a function of average irradiance; this model being validated in continuous culture experiments. The model was used to determine the optimal dilution rate as well as the expected biomass concentration and productivity at optimal conditions. Finally, outdoor experiments were performed to confirm the model's validity and to determine optimal conditions at real production step. Biomass productivity values of up to 0.08 g L^?1 day^?1 were obtained at an optimal dilution rate of 0.25 per day in 0.2 m wide flat‐panel reactors using culture medium containing 0.4 g/L NO^?₃ and 0.034 g/L·PO₄^?3. Fish trials with Atlantic Salmon demonstrated that the inclusion of produced biomass into fed increase the final weight up to 5%, thus confirming the adequacy of the biomass produced for aquaculture uses. The growth model and the scaling‐up strategy proposed here are necessary to develop real industrial‐scale processes capable of supplying microalgal biomass to the aquaculture markets, which in turn require a guaranteed supply and quality of the raw materials provided.     

Growth,morphology and gas exchange responses of two-year-old Quercus castaneifolia seedlings to flooding stress

Tolerance to flooding is crucial when thinking in promissory species for restoration of ecosystems prone to suffer soil water excess. In this study, we tested the flooding tolerance of two-years-old seedlings of Chestnut-leaved oak (Quercus castaneifolia C.A.Mey.) to determine whether it can be recommended for use in wetland restoration programs. Seedlings of Q. castaneifolia were subjected to three treatments: (1) control (C), (2) flooding for 60 days followed by a 42-day recovery period (F?+?R) and (3) continuous flooding for 102 days (F). Physiological performance, plant morphological changes and biomass accumulation were assessed. Results showed that, although net photosynthetic rates, stomatal conductance and transpiration decreased with prolonged flooding, when flood waters were removed, plants were able to recover their physiological activity (49–80% compared to controls). By contrast, when plants were continually flooded, their physiological activity decreased as well as the leaves experienced precocious senescence and wilting. Biomass responses paralleled physiological responses: leaf and root biomass were 42–49% higher under F?+?R treatment than under continuous flooding, and all plants under the F?+?R survived. Therefore, Q. castaneifolia appears as a promising species to be further studied when thinking re-vegetation of riverine areas and other temporarily flooded wetlands.     

New organic substrates and boron fertilizing for production of yellow passion fruit seedlings

The identification of alternative substrates suitable for seedling production is very important, while boron nutrition is also relevant due to plant requirement and its difficult management. Thus, four experiments were carried out from October 2012 to April 2013 to evaluate the effect of substrates using decomposed buriti (Mauritia vinifera Mart.) stem (DBS) and boron fertilizing for seedling production of yellow passion fruit (Passiflora edulis Sims). The experimental design was completely randomized in factorial scheme 6 × 2 + 1, referring to the substrates [S1: DBS, S2: soil and sand 1:1 (20%) + DBS (80%), S3: soil and sand 1:1 (40%) + DBS (60%), S4: soil and sand 1:1 (60%) + DBS (40%), S5: soil and sand 1:1 (80%) + DBS (20%), S6: commercial substrate (additional treatment) and S7: soil, sand and manure 1:1:2] with and without boron. The seedling emergence, emergence rate, plant height, stem diameter, root length, root volume and dry mass of roots and shoots were recorded. The substrates S2 (without B fertilizing) and S4 (B fertilized with 0.5 mg dm^?3) produced seedlings with more than 3.0 g of shoot dry mass and at least 30 cm in height, and can be used for production of high-quality yellow passion fruit seedlings.     

Magnetic resonance imaging diagnosis: incomplete ossification of the humeral condyle in a German shepherd dog

Clinical signs, radiological, arthroscopic findings and magnetic resonance imaging features of a male German shepherd dog with incomplete ossification of the humeral condyle are described. The dog showed recurrent left forelimb lameness and pain on elbow palpation. In routine radiographs, the lesion was obscured. In oblique radiographs, a radiolucent line was detected, and magnetic resonance imaging clearly demonstrated a defect in the humeral condyle. However, arthroscopy showed no changes or discontinuity of the humeral cartilage. Incomplete ossification of the humeral condyle may be underrepresented in conventional, routine studies because if there is concurrent additional elbow pathology (for example fragmented coronoid process), treatment may lead to clinical improvement and further diagnostic techniques may not be performed. The benefit of magnetic resonance imaging in this case is demonstrated.     

Evaluation of endocytic capacity and NADPH-oxidase activity from armadillo (Dasypus novemcinctus) eosinophils infected with microfilariae

Endocytic activity of phagocytic cells from armadillos infected with viruses, parasites or bacteria is unknown. This report shows that eosinophils from armadillos infected with microfilaria act against these helmintic parasites but have deficiencies in their oxygen-dependent bacteriocidal mechanisms and also in endocytic capacity against yeast.     

Collaborative development of the Arrowsmith two node search interface designed for laboratory investigators

Arrowsmith is a unique computer-assisted strategy designed to assist investigators in detecting biologically-relevant connections between two disparate sets of articles in Medline. This paper describes how an inter-institutional consortium of neuroscientists used the UIC Arrowsmith web interface http://arrowsmith.psych.uic.edu in their daily work and guided the development, refinement and expansion of the system into a suite of tools intended for use by the wider scientific community.