Airborne multi-spectral imagery for mapping cruciferous weeds in cereal and legume crops

Cruciferous weeds are competitive broad-leaved species that cause losses in winter crops. In the present study, research on remote sensing was conducted on seven naturally infested fields located in Córdoba and Seville, southern Spain. Multi-spectral aerial images (four bands, including blue (B), green (G), red (R) and near-infrared bands) taken in April 2007 were used to evaluate the feasibility of mapping cruciferous patches (Diplotaxis spp. and Sinapis spp.) in winter crops (wheat, broad bean and pea) and compare the accuracy of different supervised classification methods (vegetation indices, maximum likelihood and spectral angle mapper). The best classification method was selected to develop site-specific cruciferous treatment maps. Cruciferous patches were efficiently discriminated with red/blue (R/B) and blue/green (B/G) vegetation indices and the maximum likelihood classifier. At all of the locations, the accuracy of the results obtained from the spectral angler mapper was relatively low. The cruciferous weed-classified imagery of each location were created according to the method that provided the best discrimination results and were used to obtain site-specific treatment maps for in-season post-emergence control measures or herbicide applications for subsequent years. By applying the site-specific treatment maps, herbicide savings from 71.7 to 95.4% for the no-treatment areas and from 4.3 to 12% for the low-dose herbicide were obtained.     

Development of the teleomorph of Ascochyta rabiei on culture media

Ascochyta blight caused by Didymella rabiei (anamorph: Ascochyta rabiei) is an important foliar disease of chickpea in many countries. The fungus is heterothallic and requires the pairing of two compatible mating types for the teleomorph to develop. In nature, the teleomorph only develops on chickpea debris that overwinters on the soil surface in the presence of both mating types. When natural and synthetic agar media were seeded with conidial suspensions of compatible isolates of D. rabiei from Spain and the United States and incubated under favourable conditions for teleomorph development, the teleomorph only developed on 2?% water agar amended with powdered chickpea stems or hot water extracts of chickpea stems, but not on 14 other natural or synthetic media. Ascospore isolates of D. rabiei from pseudothecia that developed on agar media were indistinguishable in cultural and morphological characteristics from isolates of the fungus from chickpea. Production of pseudothecia and ascospores on the best culture medium was always lower than on stem pieces of chickpea straw used as a control treatment. Ascospores discharged from pseudothecia that developed on powdered chickpea stem media onto chickpea seedlings were pathogenic, inducing symptoms identical to those caused by ascospores from chickpea stem pieces or conidia from a chickpea isolate of the fungus. This is the first report of the teleomorph of D. rabiei developing on culture media.     

New Ikarugamycin Derivatives with Antifungal and Antibacterial Properties from Streptomyces zhaozhouensis

A bioassay guided fractionation of the ethyl acetate extract from culture broths of the strain Streptomyces zhaozhouensis CA-185989 led to the isolation of three new polycyclic tetramic acid macrolactams (1–3) and four known compounds. All the new compounds were structurally related to the known Streptomyces metabolite ikarugamycin (4). Their structural elucidation was accomplished using a combination of electrospray-time of flight mass spectrometry (ESI-TOF MS) and 1D and 2D NMR analyses. Compounds 1–3 showed antifungal activity against Aspergillus fumigatus, Candida albicans and antibacterial activity against methicillin-resistant Staphylococcus aureus (MRSA).     

Early season weed mapping in sunflower using UAV technology: variability of herbicide treatment maps against weed thresholds

Site-specific weed management is defined as the application of customised control treatments only where weeds are located within the crop-field by using adequate herbicide according to weed emergence. The aim of the study was to generate georeferenced weed seedling infestation maps in two sunflower fields by analysing overlapping aerial images of the visible and near-infrared spectrum (using visible or multi-spectral cameras) collected by an unmanned aerial vehicle (UAV) flying at 30 and 60 m altitudes. The main tasks focused on the configuration and evaluation of the UAV and its sensors for image acquisition and ortho-mosaicking, as well as the development of an automatic and robust image analysis procedure for weed seedling mapping used to design a site-specific weed management program. The control strategy was based on seven weed thresholds with 2.5 steps of increasing ratio from 0 % (herbicide must be applied just when there is presence or absence of weed) to 15 % (herbicide applied when weed coverage >15 %). As a first step of the imagery analysis, sunflower rows were correctly matched to the ortho-mosaicked imagery, which allowed accurate image analysis using object-based image analysis [object-based-image-analysis (OBIA) methods]. The OBIA algorithm developed for weed seedling mapping with ortho-mosaicked imagery successfully classified the sunflower-rows with 100 % accuracy in both fields for all flight altitudes and camera types, indicating the computational and analytical robustness of OBIA. Regarding weed discrimination, high accuracies were observed using the multi-spectral camera at any flight altitude, with the highest (approximately 100 %) being those recorded for the 15 % weed threshold, although satisfactory results from 2.5 to 5 % thresholds were also observed, with accuracies higher than 85 % for both field 1 and field 2. The lowest accuracies (ranging from 50 to 60 %) were achieved with the visible camera at all flight altitudes and 0 % weed threshold. Herbicide savings were relevant in both fields, although they were higher in field 2 due to less weed infestation. These herbicide savings varied according to the different scenarios studied. For example, in field 2 and at 30 m flight altitude and using the multi-spectral camera, a range of 23–3 % of the field (i.e., 77 and 97 % of area) could be treated for 0–15 % weed thresholds. The OBIA procedure computed multiple data which permitted calculation of herbicide requirements for timely and site-specific post-emergence weed seedling management.     

Estimation of goat production potential and efficiency in the resource-poor communal areas of the Eastern Cape Province of South Africa

It is often inappropriately assumed that the contributions of goats to household economies are similar across flock sizes. A monthly questionnaire was administered to 19, 21, and 13 farmers in Matatiele and Qawukeni and Mankone. Entries and exits to and from each flock were assessed. Most (P < 0.05) kids were born in August (4.92 ± 0.362 and 2.03 ± 0.329 for large and small flocks, respectively). Total entries were higher (P < 0.05) in August, September, and October than in the other months. Kid mortality peaked in May and September at 21%. Most (P < 0.05) goats were sold in December (1.06 ± 0.127 for large flocks and 0.23 ± 0.135 for small flocks). Goat production efficiency (GPE) was affected (P < 0.05) by month and flock size. The GPE was higher (P < 0.05) in small than in large flocks. The low GPE values obtained in this study indicates the need to devise other indices that factor in the neglected functions of goats when measuring goat production efficiency in communities where the main function of goats is not for sale or consumption.     

Pre-parturition staphylococcal mastitis in primiparous replacement goats: persistence over lactation and sources of infection

This investigation reported for the first time the occurrence of intramammary infections caused by Staphylococcus in primiparous replacement goats before parturition and the persistence of clinical Staphylococcus aureus infection during the lactation period. Subclinical infections, mainly caused by coagulase negative staphylococci (CoNS), did not persist during lactation. Genotyping analysis indicated that environment seems to play a moderate role as source of intramammary infections to goats before parturition, but causative agents of mastitis in lactating animals are not genotypically related to environmental staphylococci. The occurrence and persistence of intramammary infections in replacement goats demonstrate the need to consider those animals as potential sources of infections in dairy goat herds.     

Detection of protection benefits for predatory fishes depends on census methodology

1. Marine protected areas (MPAs) are used as fisheries management and conservation tools. Well-enforced no-take zones allow the rebuilding of natural populations of exploited species; however, there is still controversy on the role of buffer zones.
2. The effectiveness of MPAs could be underestimated, as fish population assessments depend largely on traditional methodologies that have difficulties in detecting predatory fish because of their low abundances, their patchy distribution, and their reaction to the presence of divers.
3. The performance of different census methods was compared in assessing the protection benefits for large predatory fishes under different protection levels (i.e. no-take and buffer zones) in five Mediterranean MPAs. Specifically, conventional strip transects (CSTs, 50 × 5 m²) and tracked roaming transects combined with distance sampling (TRT + DS, variable lengths) were compared, including a series of TRT-derived estimators with variable transect lengths and fixed widths of 20, 10, and 6 m (TRT20, TRT10, and TRT6, respectively). Additionally, the effectiveness of the MPAs studied and protection levels for conserving large predatory species was evaluated.
4. Transects covering larger areas (i.e. TRT + DS and TRT20) allowed the detection of a greater number of species and yielded more accurate estimates of density and biomass than transects of narrower fixed widths, particularly the CSTs, which were associated with the lowest richness detection capability, accuracy, and precision. On average, both no-take zones and buffer zones appeared effective for the conservation of predatory fishes, indicating that multiple protection areas were ecologically effective. Differences between MPAs were also observed, however, probably arising from both local environmental and management factors.
5. We suggest the implementation of methodologies with larger transects for the study of large predatory fish, combined with CSTs for the rest of the fish community, in order to avoid biases in predatory population assessments, which are key indicators of MPA effectiveness.