Estimation of bioenergy crop yield and N status by hyperspectral canopy reflectance and partial least square regression

The objective of this study was to compare performance of partial least square regression (PLSR) and best narrowband normalize nitrogen vegetation index (NNVI) linear regression models for predicting N concentration and best narrowband normalize different vegetation index (NDVI) for end of season biomass yield in bioenergy crop production systems. Canopy hyperspectral data was collected using an ASD FieldSpec FR spectroradiometer (350–2500 nm) at monthly intervals in 2012 and 2013. The cropping systems evaluated in the study were perennial grass {mixed grass [50 % switchgrass (Panicum virgatum L.), 25 % Indian grass “Cheyenne” (Sorghastrum nutans (L.) Nash) and 25 % big bluestem “Kaw” (Andropogon gerardii Vitman)] and switchgrass “Alamo”} and high biomass sorghum “Blade 5200” (Sorghum bicolor (L.) Moench) grown under variable N applications rates to estimate biomass yield and quality. The NNVI was computed with the wavebands pair of 400 and 510 nm for the high biomass sorghum and 1500 and 2260 nm for the perennial grass that were strongly correlated to N concentration for both years. Wavebands used in computing best narrowband NDVI were highly variable, but the wavebands from the red edge region (710–740 nm) provided the best correlation. Narrowband NDVI was weakly correlated with final biomass yield of perennial grass (r² = 0.30 and RMSE = 1.6 Mg ha^?1 in 2012 and r² = 0.37 and RMSE = 4.0 Mg ha^?1, but was strongly correlated for the high biomass sorghum in 2013 (r² = 0.72 and RMSE = 4.6 Mg ha^?1). Compared to the best narrowband VI, the RMSE of the PLSR model was 19–41 % lower for estimating N concentration and 4.2–100 % lower for final biomass. These results indicates that PLSR might be best for predicting the final biomass yield using spectral sample obtained in June to July, but narrowband NNVI was more robust and useful in predicting N concentration.     

Comparison of direct sampling and brochoalveolar lavage for determining active drug concentrations in the pulmonary epithelial lining fluid of calves injected with enrofloxacin or tilmicosin

Antibiotic distribution to interstitial fluid (ISF) and pulmonary epithelial fluid (PELF) was measured and compared to plasma drug concentrations in eight healthy calves. Enrofloxacin (Baytril^® 100) was administered at a dose of 12.5 mg/kg subcutaneously (SC), and tilmicosin (Micotil^® 300) was administered at a dose of 20 mg/kg SC. PELF, sampled by two different methods—bronchoalveolar lavage (BAL) and direct sampling (DS)—plasma, and ISF were collected from each calf and measured for tilmicosin, enrofloxacin and its metabolite ciprofloxacin by HPLC. Pharmacokinetic analysis was performed on the concentrations in each fluid, for each drug. The enrofloxacin/ciprofloxacin concentration as measured by AUC in DS samples was 137 ± 72% higher than in plasma, but in BAL samples, this value was 535 ± 403% (p < .05). The concentrations of tilmicosin in DS and BAL samples exceeded plasma drug concentrations by 567 ± 189% and 776 ± 1138%, respectively. The enrofloxacin/ciprofloxacin concentrations collected by DS were significantly different than those collected by BAL, but the tilmicosin concentrations were not significantly different between the two methods. Concentrations of enrofloxacin/ciprofloxacin exceeded the MIC values for bovine respiratory disease pathogens but tilmicosin did not reach MIC levels for these pathogens in any fluids.     

Resistance to Leptosphaeria maculans (phoma stem canker) in Brassica napus (oilseed rape) induced by L. biglobosa and chemical defence activators in field and controlled environments

Effects of pretreatment of Brassica napus leaves with ascospores of Leptosphaeria biglobosa or chemical defence activators [acibenzolar- S -methyl (ASM) or menadione sodium bisulphite (MSB)] on infection by ascospores of Leptosphaeria maculans (phoma stem canker) and development of disease were studied in controlled-environment (phoma leaf spot) and field (phoma leaf spot and stem canker) experiments. In controlled-environment experiments, pretreatment of oilseed rape leaves (cv. Madrigal) with L. biglobosa , ASM or MSB delayed the appearance of L. maculans phoma leaf spot lesions. These pretreatments also decreased the phoma leaf spot lesion area in both pretreated leaves (local effect) and untreated leaves (systemic effect). In winter oilseed rape field experiments in the 2002/03 and 2003/04 growing seasons, pretreatment with L. biglobosa or ASM in October/November decreased not only the number of phoma leaf spot lesions per leaf caused by L. maculans in autumn/winter, but also the severity of phoma stem canker in the subsequent spring/summer. Effects were greater in 2002/03 (when natural L. maculans ascospore release began in September 2002) than in 2003/04 (when ascospore release began in December following a period of dry weather in August/September 2003). These results suggest that pretreatment with biological or chemical defence activators can induce local and systemic resistance to L. maculans , with both short-term effects on the development of phoma leaf spotting and long-term effects on the development of stem canker 8 months later.     

Extraction and Activation of Wheat Polyphenol Oxidase by Detergents: Biochemistry and Applications

Polyphenol oxidases (PPOs) from several plant species, including wheat, have been implicated in undesirable brown discolorations of food products. It has been demonstrated that these enzymes are often present in a latent form or are membrane‐associated, necessitating detergent or other treatments to obtain fully active preparations. Here, the influence of different detergents on wheat meal and flour PPOs was investigated. Extraction in presence of 50 mM SDS led to a 5‐ to 15‐fold increase in PPO activity, making quantitative assays in flour from low‐PPO lines more robust. Among a series of additional nonionic, anionic, and cationic detergents tested, only n ‐lauroylsarcosine increased extractable PPO activity to a degree comparable to that of SDS. Additional experiments suggested that a large fraction of wheat meal PPOs may be membrane‐associated and that SDS is able to activate PPOs extracted from high‐activity but not from low‐activity wheat lines. PPO activities assayed after SDS extraction of meal and flour were highly correlated with each other and with activity determined in whole (intact) kernels in absence of SDS. Correlation coefficients between PPO activities measured with all these methods and noodle brightness were about equal, indicating that activities assayed after SDS extraction are useful for germplasm screening and quality prediction.