Possible mechanism for involvement of cysteine in aroma production in wine

Under conditions close to those of wine, that is, low pH, aqueous medium, and low temperatures, this work describes N-(2-sulfanylethyl)-2-oxopropanamide (1), a new intermediate in the formation of 2-acetylthiazole from methylglyoxal and cysteine. 1 was characterized by MS, derivatization MS, and (1)H and (13)C NMR and was synthesized from 2-sulfanylethanamine and ethyl pyruvate. A formation pathway for 2-acetylthiazole from methylglyoxal and cysteine is proposed, in which 1 is a new intermediate in Maillard-type reactions in systems under mild conditions.     

外源有机酸对两种生态型东南景天吸收和积累锌的影响

通过溶液培养试验,比较研究了外源有机酸对两种生态型东南景天生长和锌吸收与积累的影响。结果表明,外加柠檬酸或草酸能明显增强非超积累生态型东南景天的耐锌毒能力,叶片、茎和根系的生物量均有增加;而对锌超积累生态型东南景天的生长没有显著性影响。外加柠檬酸、草酸或柠檬酸+草酸,锌超积累生态型根系Zn含量显著增加,但叶片和茎组织中Zn含量无明显变化;而非超积累生态型叶片、茎和根系Zn含量均显著增加,尤其是根系Zn含量,与单独Zn处理相比外源有机酸处理增加4～5倍。同样,外加柠檬酸、草酸或柠檬酸+草酸明显提高Zn在非超积累生态型根系和地上部的积累量,且对地上部Zn积累量的促进程度大于根部;柠檬酸的促进作用又比草酸及2种酸混合处理高1倍。然而,有机酸处理对Zn超积累生态型根系Zn积累量有所增加,但对叶片和茎中Zn积累量无影响。叶片和茎中水溶态Zn含量也受外源有机酸的影响,2种生态型叶片、茎中水溶态Zn含量均受有机酸处理而提高。Zn超积累生态型叶片和茎中水溶态Zn含量占总Zn含量比例也受有机酸处理而增大,但非超积累生态型则显著降低。上述结果表明,柠檬酸和草酸可能作为其Zn吸收的配基,促进根系对Zn吸收与积累,叶片和茎中的Zn可能与可溶性有机化合物或无机盐结合。     

Classification and phylogenetic relationships in <Emphasis Type="Italic">Solanum</Emphasis> section <Emphasis Type="Italic">Lycopersicon</Emphasis> based on AFLP and two nuclear gene sequences

The classification and phylogeny of the species belonging to Solanum section Lycopersicon is a complex issue that has not yet reached a widely accepted consensus. These species diverged recently, are still closely related and, in some cases, are still even capable of interspecific hybridization, thereby blurring the difference between intra- and interspecific variation. To help resolve these issues, in the present study, several accessions covering the natural range for each species were used. In addition, to avoid biases due to the molecular method employed, both AFLP markers and two nuclear-gene sequences, CT179 and CT66, were used to characterize the plant materials. The data obtained suggest a classification similar to those previously proposed by other authors, although with some significant changes. Twelve species were recognized as distinct based on this dataset. According to the data presented, the recently proposed species, S. corneliomulleri, is indistinguishable from S. peruvianum s.str. In addition, both the sequence and the AFLP trees suggest that S. arcanum could represent a complex of populations composed of two cryptic species. With regard to phylogenetic relationships among these species, some clear groups were found: the Lycopersicon group formed by S. pimpinellifolium, S. lycopersicum, S. cheesmaniae and S. galapagense; the Arcanum group constituted by S. chmielewskii, S. neorickii, S. arcanum and S. huaylasense; and the Eriopersicon group made up of S. peruvianum and S. chilense. Solanum pennellii and S. habrochaites are not included in any group, but are the closest to the S. lycopersicoides outgroup. Jose Blanca and Fernando Nuez have contributed equally to this work and should be regarded as co-second authors.     

Modeling soil organic carbon dynamics in Oxisols of Ibirubá (Brazil) with the Century Model

Introduction of conservation practices in degraded agricultural land will generally recuperate soil quality, especially by increasing soil organic matter. This aspect of soil organic C (SOC) dynamics under distinct cropping and management systems can be conveniently analyzed with ecosystem models such as the Century Model. In this study, Century was used to simulate SOC stocks in farm fields of the Ibirubá region of north central Rio Grande do Sul state in Southern Brazil. The region, where soils are predominantly Oxisols, was originally covered with subtropical woodlands and grasslands. SOC dynamics was simulated with a general scenario developed with historical data on soil management and cropping systems beginning with the onset of agriculture in 1900. From 1993 to 2050, two contrasting scenarios based on no-tillage soil management were established: the “status quo” scenario, with crops and agricultural inputs as currently practiced in the region and the “high biomass” scenario with increased frequency of corn in the cropping system, resulting in about 80% higher biomass addition to soils. Century simulations were in close agreement with SOC stocks measured in 2005 in the Oxisols with finer texture surface horizon originally under woodlands. However, simulations in the Oxisols with loamy surface horizon under woodlands and in the grassland soils were not as accurate. SOC stock decreased from 44% to 50% in fields originally under woodland and from 20% to 27% in fields under grasslands with the introduction of intensive annual grain crops with intensive tillage and harrowing operations. The adoption of conservation practices in the 1980s led to a stabilization of SOC stocks followed by a partial recovery of native stocks. Simulations to 2050 indicate that maintaining “status quo” would allow SOC stocks to recover from 81% to 86% of the native stocks under woodland and from 80% to 91% of the native stocks under grasslands. Adoption of a “high biomass” scenario would result in stocks from 75% to 95% of the original stocks under woodlands and from 89% to 102% in the grasslands by 2050. These simulations outcomes underline the importance of cropping system yielding higher biomass to further increase SOC content in these Oxisols. This application of the Century Model could reproduce general trends of SOC loss and recovery in the Oxisols of the Ibirubá region. Additional calibration and validation should be conducted before extensive usage of Century as a support tool for soil carbon sequestration projects in this and other regions can be recommended.     

Estimation of detection probability in aerial surveys of antarctic pack-ice seals

We use line transect detection functions together with generalized linear and additive models to estimate detection probability when detection on the line (“g(0)”) may not be certain. The methods provide a flexible way of modeling detection probability for independent observer surveys, and for investigating the effects of explanatory variables. Analysis of data from an aerial survey of pack-ice seals produced g(0) estimates substantially below 1 for some observers (it varied from 0.80 to 0.98), demonstrated a fairly complex dependence of detection probability on covariates, and showed negative correlation between observers’ search width and their g(0). In addition to illustrating the utility of generalized additive models for capturing the effect of covariates on detection probability, the analysis suggests that detection functions may be sufficiently variable that use of g(0) correction factors obtained from other surveys would be inadvisable. We recommend that estimation of g(0) be considered for all aerial surveys; if g(0) is found to be very close to 1, estimation from subsequent surveys under the assumption that it is 1 may be reasonable, but without any estimation of g(0), the assumption that it is 1 is a matter of faith.     

Fungal biomass in pastures increases with age and reduced N input

Previous studies have shown that soil fungal biomass increases towards more natural, mature systems. Shifts to a fungal-based soil food web have previously been observed with abandonment of agricultural fields and extensification of agriculture. In a previous field experiment we found increased fungal biomass with reduced N fertilisation. Here, we explore relationships between fungi, bacteria, N input and grassland age on real dairy farms in the Netherlands. We hypothesised that also in pastures that are still in production there is a negative relationship between fungal biomass and fertilisation, and that fungal biomass increases with grassland age in pastures that are still in production. We expected the fungal/bacterial biomass ratio to show the same responses, as this ratio has often been used as an indicator for management changes. We sampled 48 pastures from eight organic dairy farms. Sites differed in age and fertilisation rate. We determined fungal and bacterial biomass, as well as ergosterol (a fungal biomarker). Fungal and bacterial biomass and ergosterol, showed a negative relationship with N application rate, and correlated positively with organic matter percentage. In old pastures, fungal biomass and ergosterol were higher than in younger pastures. Because bacterial biomass responded in the same way as fungal biomass, the F/B ratio remained constant, and can therefore—in our data set—not be used as an indicator for changing management. We conclude that the changes in fungal and bacterial biomass were driven by changes in organic matter quality and quantity. The negative relationship we found between N application rate and fungal biomass adds to earlier work and confirms the presence of this relationship in pastures with relatively small differences in management intensities. Earlier studies on shifts in fungal biomass focused on ex-agricultural fields or restoration projects. Here we show that fungal biomass is also higher in older agricultural pastures.     

Experimental assessment of the contribution of plant root respiration to the emission of carbon dioxide from the soil

The contributions of root and microbial respiration to the total emission of CO₂ from the surface of gray forest and soddy-podzolic soils were compared under laboratory and field conditions for the purpose of optimizing the field version of the substrate-induced respiration method. The magnification coefficients of respiration upon the addition of saccharose (k _mic) were first determined under conditions maximally similar to the natural conditions. For this purpose, soil cleared from roots was put into nylon nets with a mesh size of 40 μm to prevent the penetration of roots into the nets. The nets with soil were left in the field for 7–10 days for the compaction of soil and the stabilization of microbial activity under natural conditions. Then, the values of k _mic were determined in the root-free soil under field conditions or in the laboratory at the same temperature and water content. The contribution of root respiration as determined by the laboratory version of the substrate-induced respiration method (7–36%) was lower compared to two field versions of the method (27–60%). Root respiration varied in the range of 24–60% of the total CO₂ emission from the soil surface in meadow ecosystems and in the range of 7–56% in forest ecosystems depending on the method and soil type.     

Degradation Kinetics of an Aged Hydrocarbon-Contaminated Soil

PM2.5 and PM10 samples were collected in the urban atmosphere of Elche (southeastern Spain) between December 2004 and November 2005. The samples were analyzed for mass and water-soluble inorganic ions (Na⁺, ${\text{NH}}^{{\text{ + }}}_{{\text{4}}}$ , K⁺, Ca²⁺, Mg²⁺, Cl^?, ${\text{NO}}^{{\text{ - }}}_{{\text{3}}}$ and ${\text{SO}}^{{{\text{2 - }}}}_{{\text{4}}}$ ) with the aim of investigating the influence of the climatic and geographic features of a coastal semiarid area on the contribution of these species to PM levels. Secondary inorganic ions ( ${\text{SO}}^{{{\text{2 - }}}}_{{\text{4}}}$ , ${\text{NO}}^{{\text{ - }}}_{{\text{3}}}$ , ${\text{NH}}^{{\text{ + }}}_{{\text{4}}}$ ) were the major components in the fine fraction (PM2.5), accounting for 40% of the total mass. The relationship between non-marine ${\text{SO}}^{{{\text{2 - }}}}_{{\text{4}}}$ and ${\text{NH}}^{{\text{ + }}}_{{\text{4}}}$ indicated that fine sulfate particles were completely neutralized by ammonium. In the coarse fraction (PM10–2.5), nitrate (as NaNO₃ and Ca(NO₃)₂), together with crustal (CaCO₃) and marine species (NaCl) accounted for almost 50% of the total mass. Fine sulfate and coarse nitrate showed summer maximums. In contrast, the concentrations of fine ${\text{NO}}^{{\text{ - }}}_{{\text{3}}}$ were lowest in the warm period. Ammonium presented both winter and summer maximums. The levels of marine ions, except for coarse Cl^?, were highest in summer when the dominant wind flow is from the sea. No significant seasonal variations were observed for coarse Ca²⁺ and ${\text{SO}}^{{{\text{2 - }}}}_{{\text{4}}}$ . The concentrations of all inorganic ions increased during Saharan dust events, in particular, fine ${\text{NH}}^{{\text{ + }}}_{{\text{4}}}$ and ${\text{SO}}^{{{\text{2 - }}}}_{{\text{4}}}$ and coarse $NO_3^ - $ . Coarse calcium was proved not to be a good tracer for this type of episode in our region since the average levels of this cation are elevated and the relative increase in its concentrations during African events was not as high as expected.     

Mate choice of an endogeic earthworm revealed by microsatellite markers

Endogeic earthworms are difficult study subjects due to the cryptic medium in which they live; thus, only the behaviour of epigeic and anecic earthworms has been studied before. We used microsatellite markers as a tool to elucidate the mate choice processes of Hormogaster elisae, an endogeic earthworm. It was shown to normally mate with two partners, preferably of the same size that are found in close proximity thereby eliminating the need for long-distance dispersion, which could explain the previously observed high genetic differentiation between populations. The genetic analyses of the sperm within each of its four spermathecae showed a uniform distribution with no signs of differential storage of sperm from different partners.     

Anthropogenic Influences on Annual Flux of Cations and Anions at Meio Stream Basin, São Paulo State, Brazil

The chemical dynamics at Meio Stream Basin, São Paulo State, Brazil were evaluated using major elements as natural tracers. The surface water samples from Meio Stream were collected near the mouth of Meio Stream at the confluence with the Mogi-Guaçu River on February 25, 2005, April 20, 2005, and July 8, 2005. Rainwater samples were collected (using a “bulk” collector) for 1 year at one sampling point located about 4 km from downtown Leme city and other possible sources of contamination. The analyses were performed by pH, temperature, dissolved oxygen, electrical conductivity, total solids, sulfate, nitrate, phosphate, alkalinity, chloride, sodium, calcium, potassium, and magnesium. This basin has serious environmental problems in terms of rainwater and surface water quality, which result in the negative annual flux of cations and anions at Meio Stream Basin, with the exception of chlorine. The Meio Stream, downstream from Leme city, receives several elements/compounds through anthropogenic activities, mainly related to the discharge of domestic effluents. Anthropogenic inputs (mining, fossil fuel burning, and agricultural activities) are responsible for the higher concentrations of cations and anions in the rainwater from this basin.