Finding niches for whole-farm design models – contradictio in terminis?

Whole-farm design models quantitatively analyze the effects of a variety of potential changes at the farm system level. Science-driven technical information is confronted with value-driven objectives of farmers or other social groupings under explicit assumptions with respect to exogenous variables that are important drivers of agricultural systems (e.g., market conditions). Hence, farm design is an outcome of objective specification and the potential of a system. In recent publications, whole-farm design modelling has been proposed to enhance (farm) innovation processes. A number of operational modelling tools now offers the opportunity to assess the true potential of whole-farm design modelling to enhance innovation. In this paper, we demonstrate that it is not trivial to find niches for the application of goal-based farm models. Model outcomes appeared not to match questions of farm managers monitoring and learning from their own and other farmers’ practices. However, our research indicates that whole-farm design modelling possesses the capabilities to make a valuable contribution to reframing. Reframing is the phenomenon that people feel an urge to discuss and reconsider current objectives and perspectives on a problem. Reframing might take place in a situation (i) of mutually felt dependency between stakeholders, (ii) in which there is sufficient pressure and urgency for stakeholders to explore new problem definitions and make progress. Furthermore, our research suggests that the way the researcher enters a likely niche to introduce a model and/or his or her position in this niche may have significant implications for the potential of models to enhance an innovation process. Therefore, we hypothesize that the chances of capitalizing on modelling expertise are likely to be higher when researchers with such expertise are a logical and more or less permanent component of ongoing trajectories than when these researchers come from outside to purposefully search for a niche.     

Linking habitat suitability and seed dispersal models in order to analyse the effectiveness of hydrological fen restoration strategies

The effectiveness of measures targeted at the restoration of populations of endangered species in anthropogenically dominated regions is often limited by a combination of insufficient restoration of habitat quality and dispersal failure. Therefore, the joint prediction of suitable habitat and seed dispersal in dependency of management actions is required for effective nature management. Here we demonstrate an approach, which links a habitat suitability and a seed dispersal model. The linked model describes potential species distribution as a function of current species distribution, species-specific dispersal traits, the number of successful dispersal events, dispersal infrastructure and habitat configuration. The last two variables were related to water management actions. We demonstrate the applicability of the model in a strategy analysis of hydrological restoration measures for a large fen area in which still numerous endangered plant species grow.With the aid of the linked model, we were able to optimise the spatial planning of restoration measures, taking into account both the constraints of water management practices on abiotic restoration and the effects of habitat fragmentation on dispersal. Moreover, we could demonstrate that stand-alone habitat suitability models, which assume unlimited dispersal, may considerably overestimate restoration prospects. For these reasons, we conclude that linked habitat suitability and dispersal models can provide useful insights into spatially differentiated potentials and constraints of nature restoration measures targeted at the sustainable conservation of endangered plant populations whose habitats have been deteriorated due to undesirable effects of land and water management on abiotic conditions. These insights may contribute to the design of cost-effective nature restoration and conservation measures.     

Relative abundance and activity of melanized hyphae in different soil ecosystems

Here we report on the frequency of melanized fungal hyphae in 323 soils, covering different land use types. The proportion of total hyphae that was melanized averaged 61%. Arable fields with loamy sand, heathlands and city parks on sandy soils had the highest percentage of melanized hyphae. In addition to the frequency determinations, a microcosm study was performed on the role of melanized hyphae in two different ecosystems: an ex-arable field and a forest. Melanized hyphae appeared to be part of the active hyphae in the forest soil but not in the ex-arable soil. In conclusion, our results indicate that (1) melanized hyphae represent a large proportion of the total fungal biomass in soils and that (2) their function might differ between ecosystems.     

Transitioning from standard to minimum tillage: Trade-offs between soil organic matter stabilization, nitrous oxide emissions, and N availability in irrigated cropping systems

Few studies address nutrient cycling during the transition period (e.g., 1–4 years following conversion) from standard to some form of conservation tillage. This study compares the influence of minimum versus standard tillage on changes in soil nitrogen (N) stabilization, nitrous oxide (N₂O) emissions, short-term N cycling, and crop N use efficiency 1 year after tillage conversion in conventional (i.e., synthetic fertilizer-N only), low-input (i.e., alternating annual synthetic fertilizer- and cover crop-N), and organic (i.e., manure- and cover crop-N) irrigated, maize–tomato systems in California. To understand the mechanisms governing N cycling in these systems, we traced ¹⁵N-labeled fertilizer/cover crop into the maize grain, whole soil, and three soil fractions: macroaggregates (>250 μm), microaggregates (53–250 μm) and silt-and-clay (<53 μm). We found a cropping system effect on soil N_new (i.e., N derived from ¹⁵N-fertilizer or -¹⁵N-cover crop), with 173 kg N_new ha⁻¹ in the conventional system compared to 71.6 and 69.2 kg N_new ha⁻¹ in the low-input and organic systems, respectively. In the conventional system, more N_new was found in the microaggregate and silt-and-clay fractions, whereas, the N_new of the organic and low-input systems resided mainly in the macroaggregates. Even though no effect of tillage was found on soil aggregation, the minimum tillage systems showed greater soil fraction-N_new than the standard tillage systems, suggesting greater potential for N stabilization under minimum tillage. Grain-N_new was also higher in the minimum versus standard tillage systems. Nevertheless, minimum tillage led to the greatest N₂O emissions (39.5 g N₂O–N ha⁻¹ day⁻¹) from the conventional cropping system, where N turnover was already the fastest among the cropping systems. In contrast, minimum tillage combined with the low-input system (which received the least N ha⁻¹) produced intermediate N₂O emissions, soil N stabilization, and crop N use efficiency. Although total soil N did not change after 1 year of conversion from standard to minimum tillage, our use of stable isotopes permitted the early detection of interactive effects between tillage regimes and cropping systems that determine the trade-offs among N stabilization, N₂O emissions, and N availability.     

Competition for shifting resources in the southern Benguela upwelling: Seabirds versus purse-seine fisheries

In the southern Benguela upwelling ecosystem off the west coast of South Africa, seabird populations are decreasing dramatically because of reduced availability of pelagic fish. We tested the hypothesis that the west coast fishing industry is competing for the remaining stocks of anchovy and sardine with the largest colony of Vulnerable Cape Gannets (Morus capensis) along the Atlantic coast. Using GPS-tracking of the birds, echo-sounding of pelagic fish, and vessel log books, we located overlap areas between bird foraging ranges, pelagic fish distribution, and fishing activities. We then compared fish catches by gannets and vessels within their joint foraging zones. In October 2007, purse-seine fishing grounds and gannet foraging areas overlapped by only 13%. However, for a 1-month period, the amount of fish removed from this area by purse-seine boats amounted to 41% of the food requirements of the 72,000 gannets breeding on Malgas Island (25% of the world population). The fishery’s catch in this area is significant in terms of its potential impact on gannets, but comprises only 3.6% of total fishery catch. Based on this finding, the rapidly decreasing size of the gannet colony and the stated objectives of South Africa’s Marine Living Resources Act of 1998, the case for considering and experimenting with at-sea ‘no-take’ areas for the purse-seine fishery is strong. Efforts to establish whether ‘no-take’ fishing zones increase food availability for top predators is an important next step in conservation of the southern Benguela Ecosystem.     

Heading date and resistance to septoria tritici blotch in wheat not genetically associated

Nineteen cultivars, with large differences in heading date, were evaluated for their response to septoria tritici blotch in two experimental setups in Njoro, Kenya. Due to the more or less constant temperatures during the growing season and the overhead irrigation applied the epidemic conditions were similar over the whole observation period for the early and late cultivars. In experiment 1 the cultivars were assessed for disease severity at the same moment irrespective of the developmental stage, while in experiment 2 the cultivars were assessed at the same developmental stage. Measured at the same time, the disease severity was highest in the early maturing cultivars and lowest in the late maturing cultivars (r = –0.78). When assessed at the same development stage the disease build up was independent of heading date (r = –0.10) but strongly dependent on resistance level. There were no indications that early heading cultivars were more susceptible than late heading cultivars. This revised version was published online in July 2006 with corrections to the Cover Date.     

Implementation of two high through-put techniques in a novel application: detecting point mutations in large EMS mutated plant populations

Background  

The establishment of mutant populations together with the strategies for targeted mutation detection has been applied successfully to a large number of organisms including many species in the plant kingdom. Considerable efforts have been invested into research on tomato as a model for berry-fruit plants. With the progress of the tomato sequencing project, reverse genetics becomes an obvious and achievable goal.