Bioactive Lipids of Marine Microalga Chlorococcum sp. SABC 012504 with Anti-Inflammatory and Anti-Thrombotic Activities

Microalgae are at the start of the food chain, and many are known producers of a significant amount of lipids with essential fatty acids. However, the bioactivity of microalgal lipids for anti-inflammatory and antithrombotic activities have rarely been investigated. Therefore, for a sustainable source of the above bioactive lipids, the present study was undertaken. The total lipids of microalga Chlorococcum sp., isolated from the Irish coast, were fractionated into neutral-, glyco-, and phospho-lipids, and were tested in vitro for their anti-inflammatory and antithrombotic activities. All tested lipid fractions showed strong anti-platelet-activating factor (PAF) and antithrombin activities in human platelets (half maximal inhibitory concentration (IC₅₀) values ranging ~25–200 μg of lipid) with the highest activities in glyco- and phospho-lipid fractions. The structural analysis of the bioactive lipid fraction-2 revealed the presence of specific sulfoquinovosyl diacylglycerols (SQDG) bioactive molecules and the HexCer-t36:2 (t18:1/18:1 and 18:2/18:0) cerebrosides with a phytosphingosine (4-hydrosphinganine) base, while fraction-3 contained bioactive phosphatidylcholine (PC) and phosphatidylethanolamine (PE) molecules. These novel bioactive lipids of Chlorococcum sp. with putative health benefits may indicate that marine microalgae can be a sustainable alternative source for bioactive lipids production for food supplements and nutraceutical applications. However, further studies are required towards the commercial technology pathways development and biosafety analysis for the use of the microalga.     

A novel urea coated with pine oleoresin for enhancing yield and nitrogen uptake by maize crop

A study was conducted with maize in Vertisol, Inceptisol, Alfisol and Aridisol to evaluate the efficacy of the pine oleoresin coated urea fertilizers (coated with 1.25, 2.50, 3.75 and 5.00% pine oleoresin). Significant increase in biomass yield was observed in all the soils when urea was coated with pine oleoresin at 3.75% or more. All the pine oleoresin coated urea in Inceptisol and Aridisol; and 3.75% and 5% pine oleoresin coated urea in Vertisol and Alfisol significantly increased nitrogen (N) uptake as compared to uncoated urea. Nitrogen use efficiency increased from 19.34% to 32.80% in Vertisol, 13.06% to 28.27% in Alfisol, 13.87% to 23.86% in Inceptisol and 10.68% to 20.23% in Aridisol, as a result of coating urea with pine oleoresin. Thus the results indicate that there is a beneficial effect of coating urea with pine oleoresin with respect to yield, N uptake and use efficiency in maize crop.     

Molecular mapping of greenbug (Schizaphis graminum) resistance gene Rsg1 in barley

The greenbug, Schizaphis graminum (Rondani) is an extremely damaging aphid pest of barley (Hordeum vulgare L.) particularly in the southern Great Plains of the USA. The simply inherited, dominant resistance gene Rsg1 is in all greenbug‐resistant US barley cultivars. In this study, we conducted molecular mapping of Rsg1 using an F_2:3 population derived from a cross between the greenbug‐resistant Post 90*4/R015 and susceptible CI2260 inbred lines. Segregation of host responses to greenbug biotype E infestation confirmed that a single dominant gene is responsible for greenbug resistance in Post 90*4/R015. Simple sequence repeat (SSR) markers evenly distributed along the seven barley chromosomes were employed for the construction of a framework genetic map. Linkage analysis placed the Rsg1 locus in the long arm of chromosome 3H (3HL) flanked by SSR markers Bmag0877 and GBM1420 that were 35 cM apart. Polymorphic single‐nucleotide polymorphism (SNP) markers in 3HL were identified from an Illumina GoldenGate SNP assay and used for targeted mapping to locate Rsg1 to an 8.4‐cM interval. Comparative analysis identified syntenic genomic regions in Brachypodium distachyon chromosome 2, in which 37 putative genes were annotated including a NB‐LRR‐type resistance gene homologue that may be a potential candidate gene for the Rsg1 locus of barley. Results from this study offer a starting point for fine mapping and cloning of this aphid resistance gene in barley.     

BAC-derived SSR markers chromosome locations in cotton

Bacterial artificial chromosome (BAC) libraries with large DNA fragment inserts have rapidly become the preferred choice for physical mapping. BAC-derived microsatellite or simple sequence repeats (SSRs) markers facilitate the integration of physical maps with genetic maps. The objective of this research was to identify chromosome locations of the BAC-derived SSR markers in tetraploid cotton. A total of 192 SSR primer pairs were derived from BAC clones of an Upland cotton genetic standard line TM-1 (Gossypium hirsutum L.). Metaphor agarose gel electrophoresis results revealed 76 and 59 polymorphic markers between TM-1 and 3–79 (G. barbadense) or G. tomentosum, respectively. Using deletion analysis method, we assigned 39 markers out of the 192 primer pairs to 17 different chromosomes or chromosome arms. Among them, 19 and 17 markers were localized to A-subgenomes (chromosome 1–13) and D-subgenomes (chromosome 14–26), respectively. The subgenome status for the remaining three markers remained unclear due to their two potential chromosome locations achieved by tertiary monosomic stocks deletion analysis. Chromosomal assignment of these BAC-derived SSR markers will help in integrating physical and cotton genetic linkage maps and thus facilitate positional candidate gene cloning, comparative genome analysis, and the coordination of chromosome-based genome sequencing project in cotton. Disclaimer: Mention of trademark, proprietary product, or vendor does not constitute a guarantee or warranty of the product by USDA, ARS and does not imply its approval to the exclusion of other products or vendors that may also be suitable. The U.S. Government’s right to retain a non-exclusive, royalty-free license in and to any copyright is acknowledged.     

A Comparison of Diffusion-Conductimetric and Distillation-Titration Methods in Analyzing Ammonium- and Nitrate-Nitrogen in the KCl-Extracts of Georgia Soils

Soil mineral (or inorganic) nitrogen (SMN), which primarily exists as exchangeable and soluble ammonium (NH4⁺) and the nitrate (NO₃^?) ions, represents readily available nitrogen for plant growth. Over the years a 2M potassium chloride (KCl) solution has become the extraction solution of choice for extracting SMN. In the research and service laboratories, either distillation-titration method (DTM) or colorimetric method (CM) is virtually the standard to measure NH₄⁺- and NO₃^?-N in the 2M KCl soil extracts. However, being a time-consuming and labor intensive method, DTM generally has a very low throughput. Likewise, CM is affected by interferences from pH variation, color, turbidity, presence of organic species, and some other constituents in the extracts. In contrast, diffusion conductivity method (DCM) is a less expensive and high throughput one, which is also relatively free from common interferences. In this study, we, therefore, compared the extraction efficiency of various KCl concentrations and performance of diffusion conductivity method (DCM) with DTM in measuring NH₄⁺-N and NO₃^?-N in KCl extracts of 32 agricultural soils of Georgia. A 0.2M KCl solution extracted statistically similar amounts of NH₄⁺-N and NO₃^?-N as did 2M KCl, suggesting that a 10-fold dilute KCl solution than the standard 2M KCl might be good enough to extract and estimate the most of SMN. For the analyses of NH₄⁺- and NO₃^?-N in the KCl extracts, the DCM produced results statistically similar to those produced by DTM. The deviation between the results given by DCM and DTM was no more than ±10%. Thus, DCM appears to be an attractive alternative to the labor intensive and time-consuming DTM for measuring NH₄⁺- and NO₃^?-N in the KCl extract of soils in the research and service laboratories.     

Preparation of selective ion adsorbent by photo curing with acrylic and phosphoric acid on jute yarn

Jute yarns were cured with acrylic acid (AA) and phosphoric acid (PA) using UV radiation in order to prepare selective ion adsorbent. A series of formulations were prepared in methanol containing varying percentages of (10–70 %) of AA and 2 % photo-initiator (PI) (Darocur-4043). jute yarns were soaked in this formulation for various soaking times (10–30 min) and cured under UV radiation of different intensities (20–50 UV passes). Concentration of AA, soaking time and intensity of UV radiation were optimized based on polymer loading (PL). The maximum PL (21 %) was observed for 50 % AA solution for 20 min soaking time at 40 UV passes. Various formulations were prepared using 5–15 % (w/w) of phosphoric acid, 50 % AA and 2 % PI in methanol. Then jute yarns were soaked in this solution for 20 min and irradiated at 40th UV pass. The concentration of PA was again optimized for maximum PL. It was found that the formulation containing 10 % PA, 50 % AA, 38 % methanol and 2 % PI showed 70.95 % of PL. To investigate the adsorbent behavior, a 10 ppm CuSO₄ solution was prepared and then grafted yarns were soaked in the solutions for 30–300 min at different conditions. After withdrawing the yarns, the remaining copper in the solution were measured by atomic absorption spectrophotometer (AAS). It was revealed that copper was successfully removed by using the grafted jute yarns.     

Hyperaccumulative Characteristics of Weed Species to Heavy Metals

Phytoremediation, which mainly employs hyperaccumulators to remove heavy metals from contaminated soils, is receiving more attention world-wide. The identification of hyperaccumulators is still a key step for phytoremediation. This research is devoted to identify some plants with hyperaccumulative characteristics from weed species. In a pot culture experiment, the hyperaccumulative characteristics of 13 weed species in 11 families to Cd, Pb, Cu and Zn were examined. The result showed that Taraxacum mongolicum and Rorippa globosa indicated some Cd hyperaccumulative properties. In a sample-analysis experiment conducted in a Pb?Zn mining area, T. mongolicum and R. globosa also displayed the same hyperaccumulative characteristics. However, in a concentration gradient experiment, Cd content in shoot of T. mongolicum was not higher than 100 mg/kg (DW, dry weight), the minimum Cd concentration for a Cd-hyperaccumulator in any treatment. The concentration of Cd in the stems and leaves of R. globosa were greater than 100 mg/kg, under the conditions of the soils spiked with 25 and 50 mg/kg Cd. The Cd accumulation factors and translocation factors in the shoots of R. globosa were higher than 1 too, and the plant biomasses did not decrease significantly (p?<?0.05) compared with the control. Thus, we conclude that only R. globosa showed the whole Cd-hyperaccumulator properties, which is a Cd-hyperaccumulator.