Quantification of Flavobacterium psychrophilum in rainbow trout, Oncorhynchus mykiss (Walbaum), tissues by qPCR

A qPCR assay was developed for rapid and sensitive detection of Flavobacterium psychrophilum, the aetiological agent of bacterial cold-water disease and rainbow trout fry syndrome in salmonid fish worldwide. A set of F. psychrophilum-specific primers based on 16S rRNA gene sequences was designed and validated for specific detection and quantification of DNA isolated from representative strains of F. psychrophilum. The qPCR assay exhibited a high specificity for the 16S rRNA gene of F. psychrophilum (from 4 × 10(8) down to 11 copies per reaction) but not for other Flavobacterium species or other bacteria including fish pathogens. This qPCR-based method proved to be useful in the quantification of the F. psychrophilum titre present within organs dissected out from diseased fish. As the F. psychrophilum genome contains six copies of the 16S rRNA gene, we could infer a limit of detection corresponding to two bacteria per reaction, corresponding to 800 bacteria per fish tissue sample, and therefore 20 F. psychrophilum cells mg(-1) of tissue (for sample weighing 40 mg). The qPCR assay reported here could be a useful tool for veterinary diagnostic laboratories to monitor the F. psychrophilum infection level in fish farms.     

近期中国规模化猪场伪狂犬病野毒血清学及流行病学调查与分析

伪狂犬病(Pseudorabies)给养猪业造成非常重大的直接和间接经济与商业损失,种猪感染伪狂犬病病毒后,引起母猪发情障碍、流产、产死胎、木乃伊胎和弱仔,伪狂犬病病毒先天感染或早期感     

Impact of Intracoastal Waterway maintenance dredging on a mud bottom benthos community

The effects of hydraulic dredging on the benthic infauna of a mud bottom area were investigated in Georgia in the Atlantic Intracoastal Waterway. Complete displacement of the benthic community was caused by dredging; however, the community began to recover within a month following the cessation of dredging. Within two months the diversity and species composition of the dredged channel were similar to that of a control area and little change in sediment composition resulted. Thus, no apparent limitation was imposed on the normal benthic population by habitat alteration. Recolonisation was too rapid to have been caused by the settling of immature or larval stages from the water column alone. Bank slumping and migration of adult forms have been postulated as other means of recolonisation.     

Effect of Fucoidan on the Mitochondrial Membrane Potential (ΔΨm) of Leukocytes from Patients with Active COVID-19 and Subjects That Recovered from SARS-CoV-2 Infection

Fucoidan is a polysaccharide obtained from marine brown algae, with anti-inflammatory, anti-viral, and immune-enhancing properties, thus, fucoidan may be used as an alternative treatment (complementary to prescribed medical therapy) for COVID-19 recovery. This work aimed to determine the ex-vivo effects of treatment with fucoidan (20 µg/mL) on mitochondrial membrane potential (ΔΨm, using a cationic cyanine dye, 3,3′-dihexyloxacarbocyanine iodide (DiOC₆(3)) on human peripheral blood mononuclear cells (HPBMC) isolated from healthy control (HC) subjects, COVID-19 patients (C-19), and subjects that recently recovered from COVID-19 (R1, 40 ± 13 days after infection). In addition, ex-vivo treatment with fucoidan (20 and 50 µg/mL) was evaluated on ΔΨm loss induced by carbonyl cyanide 3-chlorophenylhydrazone (CCCP, 150 µM) in HPBMC isolated from healthy subjects (H) and recovered subjects at 11 months post-COVID-19 (R2, 335 ± 20 days after infection). Data indicate that SARS-CoV-2 infection induces HPBMC loss of ΔΨm, even 11 months after infection, however, fucoidan promotes recovery of ΔΨm in PBMCs from COVID-19 recovered subjects. Therefore, fucoidan may be a potential treatment to diminish long-term sequelae from COVID-19, using mitochondria as a therapeutic target for the recovery of cellular homeostasis.     

First account of a transient intersex in spotted scat,Scatophagus argus: a marine gonochoristic fish

Fish Physiology and Biochemistry - This study presents the first incidence of intersex associated with testis-ova in spotted scat (Scatophagus argus) reared in a controlled environment. The...     

Effects of varying dietary compositions using common feed ingredients on growth and feed efficiency of pond‐raised channel catfish Ictalurus punctatus (Rafinesque)

Two experiments were conducted to evaluate various ingredient combinations in a 28% or 32% protein diet for optimum performance of channel catfish Ictalurus punctatus. All diets contained soybean meal and corn, but with or without cottonseed meal, wheat middlings or fish meal (FM). Channel catfish fingerlings were stocked into 0.04 ha earthen ponds at 18 530 fish ha^?1. Fish were fed one of eight diets once daily to apparent satiation for two growing seasons. Results demonstrated that the dietary ingredient composition used had significant effects on fish performance, but magnitude of differences was relatively small. Overall, diets containing FM resulted in greater weight gain (Experiments 1 and 2) and lower feed conversion ratio (Experiment 1) than fish fed all‐plant diets. However, certain combinations of plant ingredients provided the similar fish growth as some diets containing FM. There were no significant differences in weight gain between fish fed soybean meal–corn or soybean meal–corn–wheat middlings‐based diets with cottonseed meal or FM. The use of wheat middlings in the diet had no significant effects on fish production characteristics.     

The pelagic habitat analysis module for ecosystem‐based fisheries science and management

We have developed a set of tools that operate within an aquatic geographic information system to improve the accessibility, and usability of remote‐sensed satellite and computer‐modeled oceanographic data for marine science and ecosystem‐based management. The tools form the Pelagic Habitat Analysis Module (PHAM), which can be applied as a modeling platform, an investigative aid in scientific research, or utilized as a decision support system for marine ecological management. Applications include fisheries, marine biology, physical and biological oceanography, and marine spatial management. The GIS provides a home for diverse data types and automated tools for downloading remote sensed and global circulation model data. Within the GIS environment, PHAM provides a framework for seamless interactive four‐dimensional visualization, for matching between disparate data types, for flexible statistic or mechanistic model development, and for dynamic application of user developed models for habitat, density, and probability predictions. Here we describe PHAM in the context of ecosystem‐based fisheries management, and present results from case study projects which guided development. In the first, an analysis of the purse seine fishery for tropical tuna in the eastern Pacific Ocean revealed oceanographic drivers of the catch distribution and the influence of climate‐driven circulation patterns on the location of fishing grounds. To support management of the Common Thresher Shark (Alopias vulpinus) in the California Current Ecosystem, a simple empirical habitat utilization model was developed and used to dynamically predict the seasonal range expansion of common thresher shark based on oceanographic conditions.