A proposal to leverage high-quality veterinary diagnostic laboratory large data streams for animal health,public health,and One Health

Test data generated by ~60 accredited member laboratories of the American Association of Veterinary Laboratory Diagnosticians (AAVLD) is of exceptional quality. These data are captured by 1 of 13 laboratory information management systems (LIMSs) developed specifically for veterinary diagnostic laboratories (VDLs). Beginning ~2000, the National Animal Health Laboratory Network (NAHLN) developed an electronic messaging system for LIMS to automatically send standardized data streams for 14 select agents to a national repository. This messaging enables the U.S. Department of Agriculture to track and respond to high-consequence animal disease outbreaks such as highly pathogenic avian influenza. Because of the lack of standardized data collection in the LIMSs used at VDLs, there is, to date, no means of summarizing VDL large data streams for multi-state and national animal health studies or for providing near-real-time tracking for hundreds of other important animal diseases in the United States that are detected routinely by VDLs. Further, VDLs are the only state and federal resources that can provide early detection and identification of endemic and emerging zoonotic diseases. Zoonotic diseases are estimated to be responsible for 2.5 billion cases of human illness and 2.7 million deaths worldwide every year. The economic and health impact of the SARS-CoV-2 pandemic is self-evident. We review here the history and progress of data management in VDLs and discuss ways of seizing unexplored opportunities to advance data leveraging to better serve animal health, public health, and One Health.     

Alfalfa (Medicago sativa L.) water use efficiency as affected by harvest traffic and soil compaction in a sandy loam soil

Summary Traffic during alfalfa harvest operations can cause soil compaction and damage to newly growing stems. Root exploration for soil water and nutrients, forage growth dynamics, and final yield can all be affected. The objectives of this study were to determine the long-term effects of harvest traffic and soil compaction on water-use efficiency (WUE) of alfalfa grown in a Wasco sandy loam (coarse-loamy, mixed, nonacid, thermic Typic Torriorthents). Alfalfa was planted into tilled soil and managed with or without harvest traffic. Plants subjected to traffic during harvest had a significantly lower WUE two out of the three years studied compared to plants that were never subject to traffic. The second experiment examined whether planting alfalfa into compacted soil and managed with or without harvest traffic altered WUE. Soil compaction had no affect on alfalfa WUE. It was significantly lower when grown in compacted soil and subjected to harvest traffic. It is suggested that the decrease in WUE caused by harvest traffic may be explained by plants allocating carbohydrates to damaged shoots and crowns instead of to above ground forage production. The area of the field affected by harvest traffic, which damages newly growing stems, should be minimized to increase crop water use efficiency.     

The effects of continuous photoperiod (24L:0D) on growth of juvenile barramundi (<Emphasis Type="Italic">Lates calcarifer</Emphasis>)

The efficacy of photoperiod manipulation to influence growth and developmental processes is well documented in a range of temperate aquaculture species. However, the application of such techniques with tropical species requires further investigation. This preliminary 20-day study investigated the influence of continuous photoperiod on growth of barramundi (Lates calcarifer). In addition, diel plasma melatonin profiles provided a physiological measure of how the endocrine system of barramundi responded to continuous photoperiod. Juvenile barramundi (1.33 ± 0.02 g) were held in recirculation systems under 12-h light: 12-h dark (12L:12D) or 24-h light (24L:0D) with a light intensity of 1,000 lux throughout the water column. Fish from both treatments grew to more than 14 times their original weight, with final weight (24L:0D = 21.59 ± 0.85 g; 12L:12D = 19.12 ± 0.55 g), total length (24L:0D = 12.67 ± 0.14 cm; 12L:12D = 11.96 ± 0.13 cm) and specific growth rate (24L:0D = 9.60 ± 0.05% bw day⁻¹; 12L:12D = 9.14 ± 0.06% bw day⁻¹) being significantly higher for fish grown on 24L:0D compared with 12L:12D. There were no significant differences in feed intake (24L:0D = 226.46 ± 6.27 g; 12L:12D = 219.02 ± 5.73 g) or feed conversion ratio (24L:0D = 0.71 ± 0.06; 12L:12D = 0.80 ± 0.07) between light treatments. Barramundi held under 12L:12D exhibited diel melatonin secretion, which peaked mid-dark phase (171.83 ± 4.81 pg ml⁻¹) followed by a gradual decrease in base levels at the onset of illumination (68.61 ± 8.77 pg ml⁻¹). When juvenile barramundi were subjected to 24L:0D, the amplitude of peak melatonin secretion was significantly suppressed during the subjective mid-dark phase (129.71 ± 2.36 pg ml⁻¹). This preliminary study confirmed that barramundi respond to photoperiod manipulation in a similar manner to many temperate fish species, thus demonstrating the future potential use of artificial lighting to improve growth in this species commercially.     

Protein and energy nutrition of brook trout (Salvelinus fontinalis) at optimal and elevated temperatures

The digestible protein (DP) and digestible energy (DE) requirements for maintenance and growth of brook trout (Salvelinus fontinalis) were determined using a factorial model at either optimum (15 °C) or elevated temperature (19 °C). Several key parameters of the factorial model were measured using a series of inter‐related studies. The maintenance requirements for DP and DE were 0.10 gDP kg^?0.69 day^?1 (15 °C) and 0.31 gDP kg^?0.78 day^?1 (19 °C), and 34.86 kJDE kg^?0.84 day^?1 (15 °C) and 46.14 kJDE kg^?0.86 day^?1 (19 °C). The total requirements for DP were 0.10 gDP kg^?0.69 day^?1 + 2.14PG (protein gain) (15 °C) and 0.31 gDP kg^?0.78 day^?1 + 1.98PG (19 °C). The total requirements for DE were 36.86 kJDE kg^?0.84 day^?1 + 1.58EG (energy gain) (15 °C) and 46.14 kJDE kg^?0.86 day^?1 + 1.64EG (19 °C). The partial efficiencies for growth were 0.47 (15 °C) and 0.51 (19 °C) for protein, and 0.63 (15 °C) and 0.61 (19 °C) for energy. Nutrient gain was lower at the elevated temperature; however, feed formulation for brook trout should be adjusted to match changes in nutrient requirements at different culture temperatures. The protein and energy requirements model will be useful for developing commercial feeds and feeding charts for brook trout.     

Carbon sequestration and saving potential associated with changes to the management of agricultural soils in England

Abstract. The potential for soil organic carbon sequestration, energy savings and the reduction of the emission of greenhouse gases were investigated for a range of changes in the management of tilled land and managed grassland. These parameters were modelled on a regional basis, according to local soils and crop rotations in England, and avoided the use of soil related indices. The largest carbon sequestration and saving contribution possible comes from an increase in the proportion of permanent woodland, such that a 10% change in land use could amount to 9 Mt C yr⁻¹ in the initial years (arable and grassland). Changes in arable management could make a significant contribution to an abatement strategy if carried out in concert with greater use of permanent conservation field margins, increased returns of crop residues and reduced tillage systems, contributing 1.3 Mt C yr⁻¹ in the initial years. It should be noted, however, that true soil carbon sequestration would be only a minor component of this (125 kt C yr⁻¹), the main part being savings on CO₂ emissions from reduced energy use, and lower N₂O emissions from reduced use of inorganic nitrogen fertilizer.