Identification of key performance indicators for on-farm animal welfare incidents: possible tools for early warning and prevention

Background

The objective of this study was to describe aspects of case study herds investigated by the Department of Agriculture, Fisheries and Food (DAFF) in which animal welfare incidents occurred and to identify key performance indicators (KPIs) that can be monitored to enhance the Early Warning System (EWS). Despite an EWS being in place for a number of years, animal welfare incidents continue to occur. Questionnaires regarding welfare incidents were sent to Superintending Veterinary Inspectors (SVIs), resulting in 18 herds being chosen as case study herds, 12 of which had a clearly defined welfare incident date. For each study herd, data on six potential KPIs were extracted from DAFF databases. The KPIs for those herds with a clearly defined welfare incident date were studied for a consecutive four year window, with the fourth year being the ''incident year'', when the welfare incident was disclosed. For study herds without a clearly defined welfare incident date, the KPIs were determined on a yearly basis between 2001 and 2009.

Results

We found that the late registration of calves, the use of on-farm burial as a method of carcase disposal, an increasing number of moves to knackeries over time and records of animals moved to ''herd unknown'' were notable on the case farms.

Conclusion

Four KPIs were prominent on the case study farms and warrant further investigation in control herds to determine their potential to provide a framework for refining current systems of early warning and prevention.     

Isolation,partial purification and characterization of a potato peel ∞-solanine cleaving glycosidase

An enzyme which hydrolyzes the rhamnose from ∞-solanine was isolated and partially purified by ammonium sulfate precipitation from the peels of Kennebec and Wauseon potatoes. Enzyme activity was found to be present in the 60 to 80% ammonium sulfate fraction. Enzyme activity was increased by the use of non-ionic detergents with a mixture of Triton X-100:Triton CF-54 (2:1, w/w) providing the greatest increase in activity. The pH optimum for the rhamnosidase for both varieties was found to be 6.0 while of the temperatures evaluated 42 °C was the optimum temperature. The effect of substrate concentration on enzyme activity was determined for both varieties and the Vmax and Km were calculated from Lineweaver-Burke double reciprocal plots. The Vmax and Km for the Kennebec and Wauseon rhamnosidases were found to be 0.27 mg/ml and 5.4 x 10^-4 M and 0.48 mg/ml and 8.2 x 10^-4 M, respectively.     

Is barley yield in the UK sink limited?: II. Factors affecting potential grain size

In the absence of serious post-anthesis stress, the potential supply of assimilates for grain filling in barley appears to exceed the storage (sink) capacity of the grains. The sink capacity is a function of the number of grains per unit land area and their potential size. In order to investigate the contribution of pre and early post-anthesis factors in the control of potential grain weight, regression analysis has been used to analyse data from field experiments conducted on winter barley crops cv. Pearl grown at six sites across the UK between 2002 and 2004. Crops were grown under a comparable husbandry regime with a full crop protection, growth regulator and fertilizer programme. The mean grain weight (MGW) varied from 35 to 46 mg at 100% dry matter over 17 site/year combinations. The variation in MGW between site/years was associated with differences in the rate rather than the duration of grain filling. MGW did not relate well to any measure of above ground growth or crop structure at ear emergence (Zadoks GS59). There was a significant positive linear relationship between MGW and the amount of radiation (PAR) intercepted per unit grain number between ear emergence and the start of rapid grain filling (r² = 0.32, P = 0.023), but not over the whole grain filling period. This is consistent with the view that MGW is determined by potential grain size. A multiple regression model comprising five explanatory variables accounted for a much larger proportion of the total variation in MGW (r² = 0.72, P = 0.013) than PAR interception on its own. There were significant positive associations of MGW with post-anthesis radiation use efficiency and PAR intercepted from GS59 to the start of rapid grain growth (RGG), and significant negative associations with the shoot number per plant, mean air temperature from GS39–59 and mean daily rainfall from GS59-RGG. The results suggest that both pre and post-anthesis conditions operate in concert to determine the potential grain weight of barley in temperate climates. The dry weight and water content of grains and ears followed a common pattern during grain growth for all site/years when the percentage moisture content was used as an index to normalise different rates of development. Use of the above data for predicting potential grain weight of barley prior to harvest is discussed.     

How weed control and fertilisation influence tree physiological processes and growth at early establishment in an exotic F<Subscript>1</Subscript> hybrid pine plantation of subtropical Australia

Purpose

This study investigated how nitrogen (N) nutrition and key physiological processes varied under changed water and nitrogen competition resulting from different weed control and fertilisation treatments in a 2-year-old F₁ hybrid (Pinus elliottii Engelm var. elliottii?×?P. caribaea var. hondurensis Barr. ex Golf.) plantation on a grey podzolic soil type, in Southeast Queensland.

Materials and methods

The study integrated a range of measures including growth variables (diameter at ground level (DGL), diameter at breast height (DBH) and height (H)), foliar variables (including foliar N concentration, foliar δ¹³C and δ¹⁵N) and physiological variables (including photosynthesis (A_n), stomatal conductance (g_s), transpiration (E), intrinsic water use efficiency (WUE_i) (A/g_s) and xylem pressure potential (Ψ_XPP)) to better understand the mechanisms influencing growth under different weed control and fertilisation treatments. Five levels of weed control were applied: standard (routine), luxury, intermediate, mechanical and nil weed control, all with routine fertilisation plus an additional treatment, routine weed control and luxury fertilisation. Relative weed cover was assessed at 0.8, 1.1 and 1.6 years after plantation establishment to monitor the effectiveness of weed control treatments. Soil investigation included soil ammonium (NH₄ ⁺-N), nitrate (NO₃ ^?-N), potentially mineralizable N (PMN), gravimetric soil moisture content (MC), hot water extractable organic carbon (HWETC), hot water extractable total N (HWETN), total C, total N, stable C isotope composition (δ¹³C), stable N isotope composition (δ¹⁵N), total P and extractable K.

Results and discussion

There were significant relationships between foliar N concentrations and relative weed cover and between tree growth and foliar N concentration or foliar δ¹⁵N, but initial site preparation practices also increased soil N transformations in the planting rows reducing the observable effects of weed control on foliar δ¹⁵N. A positive relationship between foliar N concentration and foliar δ¹³C or photosynthesis indicated that increased N availability to trees positively influenced non-stomatal limitations to photosynthesis. However, trees with increased foliar N concentrations and photosynthesis were negatively related to xylem pressure potential in the afternoons which enhanced stomatal limitations to photosynthesis and WUE_i.

Conclusions

Luxury and intermediate weed control and luxury fertilisation positively influenced growth at early establishment by reducing the competition for water and N resources. This influenced fundamental key physiological processes such as the relationships between foliar N concentration, A _n, E, g_s and Ψ_XPP. Results also confirmed that time from cultivation is an important factor influencing the effectiveness of using foliar δ¹⁵N as an indicator of soil N transformations.

     

Importance of extensional rheological properties on fiber-enriched corn extrudates

Incorporation of insoluble fibers into extruded cereals severely limits their expansion and reduces crispness. The specific objective of this work was to investigate how corn bran and its fractions mixed with cornmeal affect rheology and extrudate expansion. Alkali-treated bran (ATB) and alkaline-soluble bran (ASB) were prepared from unmodified corn bran (UMB). Mixtures of the different corn bran fractions and degermed cornmeal having a 26% (w/w) of total dietary fibers were extruded in a twin screw extruder and expansion of the extrudates was determined. Melt shear rheology of mixtures of cornmeal and different corn bran fractions having a 20% total dietary fiber was determined using a capillary rheometer at 120 °C while the extensional rheology was determined using lubricated squeezing flow. The expansion of extrudates containing ATB was larger than those containing UMB, while extrudates containing ASB showed a greater expansion that was close to that of the control. Addition of UMB to cornmeal increased shear and extensional viscosity significantly as compared to the control. ATB addition increased the shear viscosity of the mixture to a small extent but showed the highest extensional viscosity amongst the samples. Addition of ASB resulted in mixtures having lower shear and extensional viscosities than the control.     

Temporal changes in chemical properties of air‐dried stored soils and their interpretation for long‐term experiments

The usefulness of stored soils from long‐term experiments is often questioned because of changes that might occur during storage. We examined changes during long‐term storage (8–69 years) in the chemical properties of soils with a range of pH values (3.4–8.1 in water) from woodland and grassland experiments at Rothamsted Experimental Station in the UK. No significant changes during storage were measured for total C and N. Large but erratic changes in exchangeable Na⁺ content between 1959 and 1991 were probably caused by contamination of the 1959 samples by perspiration and from sodium‐based glassware. Exchangeable K⁺ increased during storage but only by a small amount. Small changes in exchangeable Ca²⁺ and Mg²⁺ were measured in some samples but not in others. Generally the amount of exchangeable cations increased slightly during storage. This is probably linked to the decreases of 0.4 units in the pH of acid soils, which we attribute to the hydrolysis of approximately 0.25% of the exchangeable Al³⁺. A doubling of the amount of exchangeable Mn²⁺ during storage for 32 years was probably caused by re‐equilibration of Mn species. The most practicable way to prepare soil samples for long‐term storage is to dry them in air. However, those who study changes in soil by re‐analysing samples of the soil stored for a long time must (i) use the same methods of analysis, or (ii) demonstrate that different methods lead to the same results, and (iii) know what changes can arise during storage.     

Microbial degradation of several acetamide,acylanilide, carbamate,toluidine and urea pesticides

Soil enrichment was used to isolate soil microorganisms capable of degrading isopropyl carbanilate (propham), 3′,4′-dichloropropionanilide (propanil), 3′-chloro-2-methyl-p-valerotoluidide (solan), and methyl 3,4-dichlorocarbanilate (swep) in a muck and a silty clay loam. Degradation of the pesticides in enrichment solutions, and by pure cultures of effective microbial isolates was demonstrated by the production of the corresponding aniline, chloride ion liberation and disappearance of the parent compound. Degradation products were identified by gas-liquid and thin-layer chromatography.Organisms isolated include Pseudomonas striata Chester, Achromobacter sp., Aspergillus ustus (Bain) Thorn and Church, A. versicolor (Vuill. Tirabaschi), Fusarium oxysporum Schlecht, F. solani (Martius) Appel and Wollenweber, Penicillium chrysogenum Thorn, P. janthinellum Biourge, P. rugulosum Thorn and Trichoderma viride Pers. Each organism demonstrated a unique substrate specificity and was capable of degrading other aniline-based pesticides of the acetamide, acylanilide, carbamate, toluidine and urea classes.     

Fertility of sows mated on different days of the week

The farrowing rates resulting from matings on different days of the week were determined for a 2800-sow intensive piggery in both 1983 and 1984. The results showed that sows mated early in the week achieved a significantly higher farrowing rate than sows mated late in the week (P less than 0.0001). During the seasonal (summer to autumn) infertility period, Wednesday matings resulted in a poor farrowing rate whereas for the rest of the year farrowing rates following Wednesday matings were similar to those for Sunday Monday and Tuesday matings. Consistent results were obtained for data from both years. It is proposed that the stress of regrouping unmated sows on Wednesday to accommodate newly weaned sows is responsible for this decrease in fertility. This study illustrates how detailed analysis of farrowing rates on a day of mating basis can identify a problem which is otherwise masked by weekly data.     

The comparative pathogenicity of four serovars of Actinobacillus (Haemophilus) pleuropneumoniae

The pathogenicity of 2 isolates of each of serovars 7, 3, 1 and 2 of Actinobacillus pleuropneumoniae was tested by intranasal inoculation into 60, 6-week-old large white pigs. Four dose rates varying from 0.27 to 560 x 10(6) organisms per pig with 10-fold serial dilutions were used. Surviving pigs were necropsied 7 days after inoculation. The proportion of pigs dying and developing gross lesions following infection was significantly greater for pigs given serotype 1 than for each of the other 3 serotypes, which did not differ significantly from each other. Twelve of 16 pigs given either of the 2 isolates of serovar 1 died after acute illness and 1 of 44 pigs given either of the 2 isolates each of serovars 7, 3 and 2 died. Pigs given serovar 1 showed high temperatures, severe respiratory distress, frothy haemorrhagic nasal discharge and weight loss. Lung lesions were produced in all 16 pigs given serovar 1, in 7 of 14 pigs given serovar 7, 7 of 14 pigs receiving serovar 3 and in 5 of 16 pigs given serovar 2. The lethal infections were characterised by a severe acute fibrinohaemorrhagic necrotising pleuropneumonia, whereas non-lethal cases had lung lesions ranging from necrotising purulent pleuropneumonia to abscessation. Significant differences between isolates in proportions of tissues culture positive for A. pleuropneumoniae for serovars 7 and 2, but not for serovars 3 and 1 suggested that isolates may vary in virulence within serovars, but more detailed studies are needed to clarify this point.