Projected benefit-cost analysis of agri-silvicultural system: vegetable crops intercropping with <Emphasis Type="Italic">Salix alba</Emphasis> (Willow)

An experiment upon an agri-silvicultural system involving Willow (Salix alba) tree, Kale (Brassica oleracea var. acephala) and Knol khol (Brassica oleracea var. caularapa) was laid in randomized block designed at farmers’ willow field at Shalimar near Sher-e-Kashmir University of Agricultural Sciences and Technology of Kashmir, Srinagar India during 2005 and 2006. The main plot was divided into sub-spots with 8 m × 2 m in size each in which four two-year-old willow (Salix alba) trees were at a spacing of 2 m × 2 m in a sub-spot. The intercrops were maintained at recommended spacing and supplied with recommended doses of fertilizers. The benefit-cost ratio in willow plantation intercropped with vegetable crops of Kale and Knol Khol was analyzed and compared with the benefit-cost ratio of sole willow tree forestry. The results showed that every rupee invested in plantation of agri-silvicultural system generates benefit-cost ratio of 2.78 and 2.79 in case of Willow intercropping with Kale and Willow with Knol khol, respectively, while as for sole crop of willows benefit-cost ratio was calculated to be 2.66. These results provided circumstantial evidence in favour of adopting agroforestry involving willow instead of Sole tree forestry.     

Estimating Disease Prevalence Using Inverse Binomial Pooled Testing

Monitoring populations of hosts as well as insect vectors is an important part of agricultural and public health risk assessment. In applications where pathogen prevalence is likely low, it is common to test pools of subjects for the presence of infection, rather than to test subjects individually. This technique is known as pooled (group) testing. In this paper, we revisit the problem of estimating the population prevalence p from pooled testing, but we consider applications where inverse binomial sampling is used. Our work is unlike previous research in pooled testing, which has largely assumed a binomial model. Inverse sampling is natural to implement when there is a need to report estimates early on in the data collection process and has been used in individual testing applications when disease incidence is low. We consider point and interval estimation procedures for p in this new pooled testing setting, and we use example data sets from the literature to describe and to illustrate our methods.     

Spatial patterns of diversity and genetic erosion of traditional cassava (<Emphasis Type="Italic">Manihot esculenta</Emphasis> Crantz) in the Peruvian Amazon: An evaluation of socio-economic and environmental indicators

This study evaluates quantitatively the suitability of the use of site-specific socio-economic and environmental data as indicators to rapidly assess patterns of diversity and genetic erosion risk in cassava. Socio-economic data as well as farmers’ estimation of genetic erosion were collected in the study area, the Ucayali region of the Peruvian Amazon, through interviews with 285 cassava farmers in 50 communities, while diversity was assessed based on agromorphological characterization of 295 cassava accessions. Using multivariate regression analyses, 50 and 45% of the variation in respectively diversity and genetic erosion estimation could be explained by a selected set of socio-economic and environmental indicators. In both regression models four out of the total of 38 variables proved to contribute significantly (at p < 0.10 level). Additionally, the study revealed that farmers are a good direct source of information on the diversity present at community level, which can contribute to the development of methodologies to assess diversity more rapidly. The results of this study are valuable for the development of models to rapidly assess diversity dynamics in large areas.     

RAPD and ISSR molecular markers in <Emphasis Type="Italic">Olea europaea</Emphasis> L.: Genetic variability and molecular cultivar identification

Thirty Portuguese and eight foreign olive (Olea europaea L.) cultivars were screened using Random Amplified Polymorphic DNA (RAPD) and Inter-Simple Sequence Repeat (ISSR) markers. Twenty RAPD primers amplified 301 reproducible bands of which 262 were polymorphic; and 17 ISSR primers amplified 204 bands of which 180 were polymorphic. The percentage of polymorphic bands detected by ISSR and RAPD was similar (88 and 87%, respectively). The genetic variability observed was similar in the Portuguese and foreign olive cultivars. Seven ISSR and 12 RAPD primers were able to distinguish individually all 38 olive cultivars. Twenty specific molecular markers are now available to be converted into Sequence Characterised Amplified Region (SCAR) markers. Relationships among Portuguese and foreign cultivars is discussed.     

Seasonal patterns of root-surface phosphatase activities in a Mediterranean shrubland. Responses to experimental warming and drought

Mediterranean ecosystems are water limited and the current general circulation Models (GCM) and ecophysiological models forecast a warming and a further increase of drought in the next decades. A stronger water stress can decrease the capacity for nutrient absorption by plants. We conducted a field experiment to simulate forecasted drought and warming in a Mediterranean calcareous shrubland to assess the performance of root-surface phosphatase activities of the dominant shrub Globularia alypum. These enzyme activities were higher in autumn and spring, when the climate conditions were optimal for plant activity, than in summer or winter, when there was either lack of water or cold temperatures. A decrease in soil moisture in drought plots decreased root-surface phosphatase activity (29% in summer and 25% in autumn). The decrease in root-surface phosphatase activity in drought plots coincided with a decrease in P leaf concentrations and P accumulation in aboveground biomass and loss of photosynthetic capacity of some dominant shrub species of this ecosystem, and with a tendency to increase total soil-P. These results suggest that the expected drier conditions in this Mediterranean shrubland in the next decades will slow down the P uptake by plants, thereby, diminishing the P contents in biomass and increasing total P contents in soil in non-available forms and that this can be, in part, attributable to a result of the decrease in root-surface phosphatase activity.     

Genetic variation of the durum wheat landrace Haurani from different agro-ecological regions

The durum wheat landrace Haurani (Triticum durum Desf.) is grown under contrasting climatic regions of Syria from Deir Ezzor, in the North-East (230 m altitude, 150 mm mean annual rainfall), to Qunaytra, in the South-West (1060 m altitude, 825 mm mean annual rainfall). In order to assess the genetic variation between and within Haurani populations, samples from eight provinces of Syria (Daraa, Damascus, Qunaytra, Deir Ezzor, Hassakeh, Aleppo, Homs and Hama) were analysed by RFLPs and seed storage proteins of glutenin subunits as markers. The analyses showed the presence of genetic polymorphisms in all populations with the highest values in those from Homs and Hassakeh. Moreover, the results point out differences in genetic distances between populations; some populations were further apart, such as Damascus and Aleppo, whereas others were closer to each other, for instance Homs and Hama. Cluster analysis identified two distinct groups of populations, characterized by geographical proximity, with similar rainfall and altitude. It is suggested that the similarity of landraces at locations close to each other might be the result of more frequent seed exchanges between farmers or of gene flow due to 5% estimated outcross rate of Haurani.     

Differentiation of citrus bacterial canker strains in Korea by host range,rep-PCR fingerprinting and 16S rDNA analysis

Soil-borne cereal mosaic virus (SBCMV) causes a severe disease in susceptible cultivars of winter wheat. The virus is vectored by the soil-borne protist Polymyxa graminis. Experiments were conducted to investigate whether SBCMV RNA2 could persist in seed from SBCMV-infected susceptible cultivars of winter wheat. Over 7,000 seedlings were generated from seed collected from two cultivars of SBCMV-infected winter wheat. Seedlings were grown in a glasshouse compartment and batch tested for the presence of SBCMV using real-time RT-PCR. The majority of batches tested positive for SBCMV, indicating an RNA2 transmission rate of 1.8–9.4% in wheat. The presence of the virus was confirmed by amplifying and sequencing a larger (400 bp) fragment of viral RNA2 in a sub-set of the seedlings testing positive by real-time RT-PCR. Root extracts from this sub-set tested negative for P. graminis using real-time PCR. The implications for disease epidemiology of this virus are discussed. The authors are British Civil Servants and as such their work is subject to British Crown Copyright. This means the exclusive copyright for the article cannot be transferred.     

Antioxidant,ethylene and membrane leakage responses to powdery mildew infection of near-isogenic barley lines with various types of resistance

Leaves of powdery mildew-susceptible barley (Hordeum vulgare cv. Ingrid) and related near-isogenic lines bearing various resistance genes (Mla12, Mlg or mlo5) were inoculated with Blumeria graminis f. sp. hordei race A6. Fungal attack induced several-fold increases in ethylene emission and electrolyte leakage in leaves of susceptible Ingrid beginning 3 days after inoculation. Activities of peroxidase, superoxide dismutase, glutathione S-transferase, ascorbate peroxidase and glutathione reductase enzymes were induced markedly in susceptible leaves 5–7 days after inoculation. Similar, but less pronounced pathogen-induced changes were detected in inoculated leaves of Mla-type resistant plants that show hypersensitive cell death upon inoculation, and, to an even lesser extent, in the Mlg and mlo lines, where no visible symptoms accompanied the incompatible interaction. Glutathione content increased only in susceptible barley 7 days after inoculation. Catalase activity, total ascorbate content and redox state were not influenced by inoculation in any of the genotypes. The activity of dehydroascorbate reductase was significantly reduced 3–5 days after inoculation in the susceptible parental plants and after 5 days in Mla and Mlg lines, while it was stable in the mlo barley. Slightly elevated levels of H₂O₂ were observed in the inoculated resistant plants. In contrast, H₂O₂ content decreased in the susceptible line 7 days after pathogen attack. These data indicate that high levels of antioxidants are involved in the compatible interaction of susceptible barley and powdery mildew by protecting the pathogen from oxidative damage.