Two-year dynamics of foliage labelling in 8-year-old <Emphasis Type="Italic">Pinus pinaster</Emphasis> trees with <Superscript>15</Superscript>N, <Superscript>26</Superscript>Mg and <Superscript>42</Superscript>Ca—simulation of Ca transport in xylem using an upscaling approach

• Introduction   

Atmospheric deposition is an important input of major nutrients into forest ecosystems. The long-term goal of this work was to apply stable isotope methodology to assess atmospheric nutrient deposition in forest systems.     

Effect of penetration speed on flesh firmness measured on stored kiwifruit

The effect of penetration speed on flesh firmness (FF) measurement by motorised penetrometer was examined for ‘Hayward’ (Actinidia deliciosa var. deliciosa) and ‘Hort16A’ (Actinidia chinensis Planch. var. chinensis) kiwifruit. Data was collected for penetration speeds varying from 4 to 40 mm s⁻¹ using stored fruit of FF ∼10 N; a typical minimum FF threshold for export from New Zealand. Measurements were made on a number of instruments (Instron, GUSS FTA, HortPlus, TA.XTplus), using fruit from different orchards and in each of two different seasons. As expected, FF values increased with increasing penetration speed. A firmness-speed model was developed, based on the Maxwell rheological model for viscoelastic materials, which proved adequate in describing the FF data in terms of the effect of penetration speed. The effect of penetration speed was not adversely influenced by cultivar, season or instrument type. Within the range of fruit firmness examined - stored fruit below 20 N - it was concluded that the firmness-speed model could be successfully used to compare firmness values generated using instruments operating at different penetration speeds.     

A survey of the orangutan (Pongo pygmaeus wurmbii) population in and around Gunung Palung National Park, West Kalimantan, Indonesia based on nest counts

We conducted the first orangutan population census of Gunung Palung National Park, West Kalimantan, Indonesia, between April and September 2001. We used a refined line-transect nest-count methodology utilizing transect recounts to survey 69 km at 14 sites within the park and 14.2 km in the buffer zone. We present the first Bornean orangutan density estimate using complete site-specific parameters and long term monitoring of nest decay rates. Average orangutan density was 3.0 individuals/km², with densities ranging from 2.4 ind/km² in montane forest to 4.1 ind/km² in primary peat swamp. In addition, we tested alternative approaches to calculation of the nest-duration parameter. The second count of each transect resulted in 30% higher density estimates overall. We conclude that recounts should be incorporated into standard line-transect methodology. We estimate there to be ≈2500 individual orangutans in Gunung Palung, indicating the importance of this site in plans to conserve a network of viable orangutan populations. While logging may reduce densities, disturbed forest both inside and adjacent to the park has high conservation value as orangutan habitat. Further research into long-term orangutan population persistence in disturbed forest is needed.     

Properties of land mosaics: Implications for nature conservation in agricultural environments

Agricultural landscapes are mosaics of different land uses. Their vast extent throughout the world means that they have a key role in the conservation of biodiversity. To provide a sound basis for management, it is important to recognise the emergent properties of land mosaics and understand how they influence components of biodiversity. In most studies in agricultural landscapes, inference is restricted to single sites or patches because this is the unit used for sampling and analysis. For mosaic-level inference, sampling must encompass multiple land uses and elements within a mosaic, be aggregated to represent the ‘whole’ mosaic, and be replicated across multiple mosaics. This paper reviews studies in which land mosaics are the unit of replication, to identify the influence on biota of three categories of emergent properties of mosaic structure: the extent of habitat, composition of the mosaic and spatial configuration of elements. The extent of habitat is usually a dominant influence on the occurrence of single species or the richness of assemblages defined by habitat type (e.g., forest birds). The composition of the mosaic, based on the proportions of elements present, strongly influences the species composition of faunal assemblages. Heterogeneity or diversity of elements is often positively correlated with the richness of taxonomic assemblages. In studies that separate the independent effects of emergent properties, spatial configuration generally exerts less influence on biota than extent or composition. A fourth property, the geographic position or environmental variation among land mosaics, also significantly affects the status of the fauna in many studies. Temporal persistence of species and turnover in assemblages in agricultural landscapes are also influenced by the structure of the land mosaic, but there are few long-term data sets that allow comparison of temporal changes with mosaic properties. There is great scope for further investigation of the properties of mosaics and the mechanisms by which they affect the conservation of biodiversity. This includes studies of responses from a wider range of biota (in addition to birds), investigation of spatial scale effects on faunal responses, temporal responses of the fauna to change in mosaic structure (and potential time-lags in response), and the effects of variation in mosaic structure on population demography and ecological processes.     

Educate,consolidate, immigrate: Educational immigration in Auckland,New Zealand

Abstract: This paper considers the convergence of immigration/globalisation and education in New Zealand. The issues of immigrant students at Epsom Normal Primary School were raised nationally in 1995, and this incident serves as a useful departure point to consider some of the challenges involved in bridging the gap between immigration and education. Educational immigration is a notion used by Belich (2001) amongst others, to suggest that immigrants arrive in New Zealand in order to bypass full cost fees paid by international students. This notion, while useful, is challenged. Research undertaken in North Shore City as well as official immigration figures show the complexities of the issue: immigrant communities may be indirect recruiters of these students, but there are also an increasing number of international students becoming permanent residents. Either way, education providers face particular challenges with migrant students, not only in terms of English language abilities, but also in the lack of financial incentive migrant students give to an education provider relative to international students’ contributions. These micro issues are placed in perspective when returning to considering the transient nature of many young migrants exploring opportunities in a globalised world.     

Effects of chronic ingestion of ochratoxin a on blood levels and excretion of the mycotoxin in sheep

Ruminants are relatively resistant to the acutely toxic effects of ochratoxin A, due to extensive degradation of ochratoxin A to its less toxic metabolite ochratoxin alpha by rumen microorganisms. However, most estimates of the degradation capacity for ochratoxin A in ruminants are based on in vitro studies. In the current study, the metabolism of ochratoxin A was investigated over a period of 29 days, feeding various doses of the mycotoxin (0, 9.5, 19.0, and 28.5 mug ochratoxin A/kg body weight) to sheep. Animals were fed diets consisting of 70% concentrates and 30% grass silage. Significant concentrations of undegraded ochratoxin A were detected in serum of sheep at all levels of ochratoxin A tested. Serum concentrations of ochratoxin A slightly accumulated with time of exposure and were linearly dependent on the administered dose of ochratoxin A. Furthermore, a constant proportion (6-8%) of the dose was excreted in the urine. The results of this study indicate that even at moderate to low levels of ochratoxin A in the diet, considerable amounts of the mycotoxin are absorbed by ruminants and may accumulate in tissues. Therefore, feeding of ochratoxin A-contaminated feedstuffs to ruminants does not seem to be a reliable means for using these feedstuffs.     

Transgenic expression of bean alpha-amylase inhibitor in peas results in altered structure and immunogenicity

The development of modern gene technologies allows for the expression of recombinant proteins in non-native hosts. Diversity in translational and post-translational modification pathways between species could potentially lead to discrete changes in the molecular architecture of the expressed protein and subsequent cellular function and antigenicity. Here, we show that transgenic expression of a plant protein (alpha-amylase inhibitor-1 from the common bean (Phaseolus vulgaris L. cv. Tendergreen)) in a non-native host (transgenic pea (Pisum sativum L.)) led to the synthesis of a structurally modified form of this inhibitor. Employing models of inflammation, we demonstrated in mice that consumption of the modified alphaAI and not the native form predisposed to antigen-specific CD4+ Th2-type inflammation. Furthermore, consumption of the modified alphaAI concurrently with other heterogeneous proteins promoted immunological cross priming, which then elicited specific immunoreactivity of these proteins. Thus, transgenic expression of non-native proteins in plants may lead to the synthesis of structural variants possessing altered immunogenicity.     

Design and evaluation of nematode 18S rDNA primers for PCR and denaturing gradient gel electrophoresis (DGGE) of soil community DNA

Consensus nematode 18S ribosomal DNA primers were designed by aligning available 18S sequences and identifying a variable region flanked by highly conserved regions. These primers were then used to amplify nematode 18S rDNA from whole soil community DNA extracted from a range of European grassland types. Cloning of the PCR amplicons (778 bp) followed by restriction digest analysis (RFLP) resulted in the recovery of 34 unique nematode sequences from the four grasslands studied. Comparison of these data with the limited number of 18S rDNA nematode sequences currently held in on-line databases revealed that all of the sequences could be assigned to known nematode taxa albeit tentatively in some cases. Two of the sequences recovered from the site in the Netherlands (wet, hay-grassland) were recovered in a clade that included a sequence of the genus Trichodorus whilst other sequences from this site showed similarity with 18S rDNA sequences of the genus Prismatolaimus (five sequences), Xiphinema (one sequence) and Enoplus (one sequence). Of the remaining sequences, two showed some affinity with Mylonchulus (UK, upland peat), four with Steinernema (UK) and one sequence with Mesorhabditis (Hungary, east European Steppe). Three sequences from the Netherlands and one from Hungary were recovered in a clade that included a sequence of the genus Pratylenchoides whilst three further sequences from the Netherlands and two from Hungary were recovered in a clade encompassing the genus Globodera. Of the remaining nine sequences, two (NL6, NL62) formed a distinct lineage within the Adenophorea with 90% bootstrap recovery in a paraphyletic clade that included sequences of Prismatolaimus and Trichodorus. Seven sequences (three from the Netherlands, three from the UK and one from Greece) were left unassigned though the tree topology suggested some relationship (58% bootstrap recovery) with the genus Cephalobus. To assess whether primers used to amplify 18S rDNA might be used to fingerprint genetic diversity in nematode communities in soil, the environmental sequence data were used to design a second set of primers carrying a GC-clamp. These primers amplified a 469 bp fragment internal to the region flanked by the primer set used to derive the nematode trees and were used to amplify 18S rDNA for subsequent analysis using denaturing gradient gel electrophoresis (DGGE). DGGE analysis of six major European grassland types revealed considerable genetic diversity between sites. However, the relationships seen with the DGGE data were inconsistent with previous studies where the same soils had been characterized with respect to functional and morphological diversity. To confirm that this second set of primers was amplifying nematode sequences, selected bands on the DGGE gels were extracted, PCR amplified and sequenced. The final alignment was 337 bases. These analyses revealed the presence of sequence signatures from the genera Paratrichodorus, Plectus, Steinernema, Globodera, Cephalobus and Pratylenchoides.     

Comparing and Blending Regional Climate Model Predictions for the American Southwest

We consider the problem of forecasting future regional climate. Our method is based on blending different members of an ensemble of regional climate model (RCM) simulations while accounting for the discrepancies between these simulations, under present day conditions, and observational records for the recent past. To this end, we develop Bayesian space-time models that assess the discrepancies between climate model simulations and observational records. Those discrepancies are then propagated into the future to obtain blended forecasts of 21st century climate. The model allows for location-dependent spatial heterogeneities, providing local comparisons between the different simulations. Additionally, we estimate the different modes of spatial variability, and use the climate model-specific coefficients of the spatial factors for comparisons. We focus on regional climate model simulations performed in the context of the North American Regional Climate Change Assessment Program (NARCCAP). We consider, in particular, simulations from RegCM3 using three different forcings: NCEP, GFDL and CGCM3. We use simulations for two time periods: current climate conditions, covering 1971 to 2000, and future climate conditions under the SRES A2 emissions scenario, covering 2041 to 2070. We investigate yearly mean summer temperature for a domain in the South West of the United States. The results indicated the RCM simulations underestimate the mean summer temperature increase for most of the domain compared to our model.