Mechanisms and molecular approaches for heat tolerance in rice (Oryza sativa L.) under climate change scenario

Rice, a staple cereal crop in many parts of the world, has been confronted with multiple environmental stresses including high temperature, negatively impacts the booting as well as anthesis growth stages. The situation is further complicated by the changing climatic conditions, resulting in gradual escalation of temperature as well as changing the rainfall pattern and frequency, thus raising a concern of food security worldwide. The situation can be combat by developing rice varieties with excellent genetics with improved morpho-physiological, biochemical, and molecular mechanisms, together can minimize the adverse effects of heat stress. Here, several strategies (encompassing genetic and genomic, and mechanisms involved) for mitigating the impact of high temperature on rice have been discussed. Finally, the utilization of genomic knowledge in augmenting the conventional breeding approaches have been comprehensively elaborated to develop heat tolerant germplasm.     

Effect of protection against hot climate on growth performance,physiological response and endocrine profile of growing lambs under semi-arid tropical environment

In the hot semi-arid tropical region, extreme summer is a major constraint in sheep production. The growth performance of growing lambs is impaired during the summer. Therefore, the present study was conducted to assess the effect of protection against hot climate on growth performance, physiological response, and endocrine profile of growing lambs under semi-arid tropical environment. All the data in the experiment were presented as mean ± SE. Thirty Malpura lambs with the age of 122.7 ± 6.05 days and body weight of 19.52 ± 0.42 kg were allotted into three groups, viz. G1 (control, lambs kept in open area under tree shade), G2 (lambs kept in conventional asbestos-roofed shed), and G3 (lambs kept in designed shed). The allotment was based on their initial body weight so that the mean body weight of each group was similar. In all three types of protection, lambs were provided with sufficient space to move and social interaction. In asbestos-roofed shed (G2), all the four sides from ground to the roof were fenced with strong galvanized iron chain link. But in G3, all the four sides were constructed in a manner that there was 0.13 m air space between inner and outer solid brick columns of the wall up to 1.37 m height, and rest up to the roof was fenced with bamboo splint net. The air space between the two columns of the wall was filled with sand, and it was kept in moist condition by continuous water drips which provide extra evaporative cooling. The designed shed was basically constructed with bamboo. Tree shade was assured under the natural shades of large trees. The shaded area was protected by wire fences. The experiment was conducted for 45 days during very high temperature (May–June). The lambs were provided with ad libitum green fodder, dry roughage, 300 g concentrate, and ad libitum drinking water. The respiration rate at morning and afternoon, pulse rate at morning and afternoon and rectal temperature at afternoon was significantly (P < 0.05) lower in lambs of G3 as compared to other groups. The final body weight did not differ significantly between the groups, but average daily gain (g/day) was higher in G3 (150.06 ± 11.13) as compared to the G1 (109.69 ± 18.10). The feed conversion rate (FCR) was significantly (P < 0.05) better in G3 (5.49 ± 0.08) as compared to G1 (7.65 ± 0.08) and G2 (6.60 ± 0.08). The hemoglobin level was significantly (P < 0.05) higher in G1. The endocrine profile did not vary significantly (P > 0.05) among the groups, but insulin-like growth factor-1 (IGF-1) was higher in G3. It can be concluded from this study the lambs provided with better protection during summer remained in more comfortable condition, showed better FCR, and although not statistically significant showed better growth performance.

     

Enhanced <Emphasis Type="Italic">Fusarium oxysporum</Emphasis> f. sp. <Emphasis Type="Italic">tuberosi</Emphasis> Resistance in Transgenic Potato Expressing a Rice GLP Superoxide Dismutase Gene

Germin like proteins (GLPs) are a large group of related and ubiquitous plant proteins which are considered to be involved in different processes important for plant development and defense. Multiple functional copies of this gene family have been reported in a number of species (wheat, barley, rice, soybean mosses and liverwort), and their role is being evaluated by gene regulation studies and transgenic approaches. To analyze the role of a rice (Oryza sativa) root expressed germin like protein1 OsRGLP1, for its antifungal activity, transgenic potato plants were developed. These transgenic potato plants were molecularly characterized and biologically assessed after inoculation with Fusarium oxysporum f. sp. tuberosi. Functional analysis showed high accumulation of H₂O₂, increased Superoxide Dismutase (SOD) activity and no oxalate oxidase activity (OxO) in transgenics in comparison to nontransformed control. This increased SOD activity, resistance to heat and sensitivity to H₂O₂ suggest it is a Fe-like SOD. OsRGLP1 expression in potato plants exhibited enhanced resistance in comparison to nontransformed wild type plants suggesting its role in providing protection against Fusarium oxysporum f. sp. tuberosi through elevated SOD level. Overall, results suggest that OsRGLP1 is a candidate for the engineering of potato plants with increased fungal tolerance however, the greater height and tuber number was observed. This phenotype associated with the resistance needs to be evaluated to determine if this is a positive or negative feature.     

Effect of dietary prebiotic inulin on histology,immuno‐haematological and biochemical parameters of Asian seabass (Lates calcarifer)

The present study was carried out to investigate the effect of supplementation of inulin on histology, immuno‐haematological and biochemical parameters of Asian seabass (Lates calcarifer) fingerlings with an initial average body weight of 7.14 ± 0.05 g. Inulin was supplemented at four different concentrations (control) 0, 5, 10, 15, and 20 g/kg in the L. calcarifer diet containing 400 g/kg protein and 90 g/kg lipid. At the end of the 60 days feeding trial, the absorptive surface area of the intestine and glycogen deposition in liver were increased in fish fed inulin supplemented diets. The immune parameters lysozyme, alternative complement pathway, superoxide dismutase and nitroblue tetrazolium assay showed significant (p < 0.05) difference between control and treatment groups. Haematological parameters showed that red blood cells, white blood cells, haemoglobin, packed cell volume, mean corpuscular volume, mean corpuscular haemoglobin and mean corpuscular haemoglobin concentration levels increased significantly (p < 0.05) in the fish fed with inulin supplemented diets. The analysis of biochemical parameters revealed that glucose, urea, cholesterol, triglyceride, aspartate aminotransferase, alkaline phosphatase, alanine aminotransferase, and lactate dehydrogenase showed significant differences (p < 0.05) between control and treatments groups. No significant difference (p > 0.05) was observed for total protein among different treatments. The results of the study revealed that 15–20 g/kg inulin supplementation has a beneficial effect in the histology, immuno‐haematological, and biochemical parameters in L. calcarifer juveniles.     

Spontaneous gene flow and population structure in wild and cultivated chicory, Cichorium intybus L.

Spontaneous gene flow between wild and cultivated chicory, Cichorium intybus L., may have implications for the genetic structure and evolution of populations and varieties. One aspect of this crop-wild gene flow is the dispersal of transgenes from genetically modified varieties, e.g. gene flow from GM chicory to natural chicory could have unwanted consequences. With the purpose to identify and quantify crop-wild gene flow in chicory, we analysed introgression in 19 wild chicory populations and 16 accessions of chicory varieties and landraces distributed across Northern, Central and Mediterranean Europe. The analysis used 281 AFLP markers and 75 SSAP markers giving a total of 356 polymorphic markers. Results from model based assignments with the program STRUCTURE indicated many incidents of recent gene flow. Gene flow was observed both between cultivars and wild populations, between landraces and wild populations, between different wild populations as well as between cultivars. Population structure visualized by distance-based clustering showed a North–South geographical structuring of the wild populations, and a general grouping of the cultivars corresponding to known origin. The results indicated, however, that the structuring between the two groups of wild and cultivated types was weak. As crop and wild recipients are genetically close and genes are transferred between the two types rather frequently, focus on mitigating crop-wild gene flow should be increased, before transgenic varieties are cultivated openly.     

Mapping the global network of fisheries science collaboration

As socio‐environmental problems have proliferated over the past decades, one narrative which has captured the attention of policymakers and scientists has been the need for collaborative research that spans traditional boundaries. Collaboration, it is argued, is imperative for solving these problems. Understanding how collaboration is occurring in practice is important, however, and may help explain the idea space across a field. In an effort to make sense of the shape of fisheries science, here we construct a co‐authorship network of the field, from a data set comprising 73,240 scientific articles, drawn from 50 journals and published between 2000 and 2017. Using a combination of social network analysis and machine learning, the work first maps the global structure of scientific collaboration amongst fisheries scientists at the author, country and institutional levels. Second, it uncovers the hidden subgroups—here country clusters and communities of authors—within the network, detailing also the topical focus, publication outlets and relative impact of the largest fisheries science communities. We find that whilst the fisheries science network is becoming more geographically extensive, it is simultaneously becoming more intensive. The uncovered network exhibits characteristics suggestive of a thin style of collaboration, and groupings that are more regional than they are global. Although likely shaped by an array of overlapping micro‐ and macro‐level factors, the analysis reveals a number of political–economic patterns that merit reflection by both fisheries scientists and policymakers.     

A human major histocompatibility complex (MHC) DNA probe recognizes goat genes

A human major histocompatibility complex (MHC) class II (DR-β) probe was hybridized with restriction enzyme digest of genomic DNA from 14 goats. Nine of the animals belonged to one family. Digestion of the DNA with the restriction enzyme Eco RI gave 7 fragments in 13 animals and 6 fragments in the last animal. No other polymorphism could be detected. Bam HI digestion gave from 3 to 6 fragments which displayed a considerable polymorphism. In the family studied, polymorphic fragments were inherited together with serologically defined lymphocyte antigen specificities believed to be coded for by MHC class I genes.     

Bio-efficiency of compost extracts on the wet rot incidence,morphological and physiological growth of okra (Abelmoschus esculentus [(L.) Moench])

An experiment was carried out to investigate the efficacy of rice straw and empty fruit bunch (EFB) of oil palm compost extracts either fortified or unfortified with Trichoderma harzianum on morpho-physiological growth and occurrence of Choanephora wet rot of okra. Treatments tested were water (control) (T1), rice straw (RST) compost extract (T2), Trichoderma-enriched RST compost extract (T3), empty fruit bunch of oil palm compost extract (T4), Trichoderma-enriched EFB compost extract (T5), aqueous suspension of Trichoderma (T6), and a fungicide Dithane M-45^® (2 g l⁻¹ of water) (T7). The experimental results revealed significant variations amongst the treatments in respect of morphological characters, e.g. shoot length, tap root length, number of leaves per plant, and leaf area. The shoot and tap root length, number of leaves per plant, leaf area were significantly (P ≤ 0.05) higher in Trichoderma-enriched RST compost extracts (T3) followed by Dithane M-45^® (T7), Trichoderma-enriched EFB extracts (T5), RST (T2), EFB (T4) and aqueous suspension of T. harzianum (T6) in both Choanephora inoculated and uninoculated (control) plots. Similarly, net photosynthetic rate and chlorophyll content were higher in plants receiving Trichoderma-enriched RST compost extracts (T3) with 76.2% reduction in Choanephora wet rot incidence when compared with rest of the treatments. These experimental results revealed that morpho-physiological characters of okra could be modified by the application of Trichoderma-enriched compost extracts. This suggests that use of Trichoderma-enriched compost extracts would be more beneficial in environmentally friendly okra cultivation and may be used as an alternative to inorganic fertilizers/fungicides to enhance plant growth and reduce disease incidence subsequently, resulting in higher yield.