Effect of timing and duration of salt treatment during growth of a fragrant rice variety on yield and 2-acetyl-1-pyrroline, proline, and GABA Levels

In greenhouse experiments, Aychade, a fragrant rice variety, was grown under one level of salt solution (EC of 3800 ± 400 μS·cm(-1)) sufficient to induce salt stress in rice. Timing and duration of salt solution application varied according to the growth stages. 2-Acetyl-1-pyrroline (2AP), a characteristic flavor compound of fragrant rice as well as biogenetically related compounds, proline, and γ-aminobutyric acid (GABA) were quantified. Salt treatments induced 2AP synthesis in the leaves, but the increase was often higher in the vegetative phase. This increase was correlated with proline level but not with that of GABA. Interestingly the grains from all the salt treated plants contained significantly higher levels of 2AP (733-998 μg·kg(-1)) than those from the control (592 μg·kg(-1)). The highest 2AP synthesis occurred when the plants were subjected to salt treatment during whole vegetative or reproductive phases. However in the latter case crop yield decreased significantly.     

Effects of brood size manipulation and common origin on phenotype and telomere length in nestling collared flycatchers

Background

Most species of brown macroalgae recruit exclusively sexually. However, Fucus radicans, a dominant species in the northern Baltic Sea, recruits new attached thalli both sexually and asexually. The level of asexual recruitment varies among populations from complete sexual recruitment to almost (> 90%) monoclonal populations. If phenotypic traits have substantial inherited variation, low levels of sexual activity will decrease population variation in these traits, which may affect function and resilience of the species. We assessed the level of inherited variation in nine phenotypic traits by comparing variation within and among three monoclonal groups and one group of unique multilocus genotypes (MLGs) sampled in the wild.

Results

Of the nine phenotypic traits, recovery after freezing, recovery after desiccation, and phlorotannin content showed substantial inherited variation, that is, phenotypic variation in these traits were to a large extend genetically determined. In contrast, variation in six other phenotypic traits (growth rate, palatability to isopod grazers, thallus width, distance between dichotomies, water content after desiccation and photochemical yield under ambient conditions) did not show significant signals of genetic variation at the power of analyses used in the study. Averaged over all nine traits, phenotypic variation within monoclonal groups was only 68% of the variation within the group of different MLGs showing that genotype diversity does affect the overall level of phenotypic variation in this species.

Conclusions

Our result indicates that, in general, phenotypic diversity in populations of Fucus radicans increases with increased multilocus genotype (MLG) diversity, but effects are specific for individual traits. In the light of Fucus radicans being a foundation species of the northern Baltic Sea, we propose that increased MLG diversity (leading to increased trait variation) will promote ecosystem function and resilience in areas where F. radicans is common, but this suggestion needs experimental support.     

Arable weed decline in Northern France: Crop edges as refugia for weed conservation?

The maintenance of biodiversity in agro-ecosystems is often viewed as an insurance against an uncertain future, yet, there is increasing evidence of biodiversity loss in agricultural landscapes. Here, we examined long term trends in the arable weed flora of North-East France by revisiting 158 arable fields initially surveyed in the 1970s. We assessed changes in species richness, density and frequency of occurrence in weed communities as well as for subgroups that are recognised for their conservation value. We also evaluated the importance of crop edges as potential refugia for the threatened arable weeds. Among the 121 species recorded in both surveys, 40% had significantly declined in frequency while 10% had significantly increased. At the field level, we recorded a 42% decline in species richness and a 67% decline in species density. Trends were comparable for weed species of particular conservation value. In the 2000s survey, crop edges harboured levels of weed diversity that were intermediate between those found in field cores in the 1970s and in the 2000s survey. Our results indicated that many species of conservation value had disappeared or seriously decreased in the field core but still persisted in the crop edge. The consequences of this general decline and possible conservation options are discussed in the light of the results.     

Assessment of the accuracy of physiological blood indicators for the evaluation of stress,health status and welfare in Siberian sturgeon (<Emphasis Type="Italic">Acipenser baerii</Emphasis>) subject to chronic heat stress and dietary supplementation

There is growing interest in the evaluation of stress, health and welfare of farm-raised fish. However, there is no scientific consensus about the methodology that is used to assess them. Sturgeon aquaculture is a recent industry with increasing interest in the production of caviar, which is characterized by high turnover and costs. To improve aquaculture efficiency, this study was conducted on routine blood samples, taken from Siberian sturgeon (Acipenser baerii), to test the robustness of using only physiological indicators to assess heat stress, health, and welfare. Sampling was performed after 1 month of prebiotic dietary supplementation followed by 4 weeks of sublethal heat stress. Data interpretation was achieved with a multivariate statistical tool. The expression of heat shock proteins (HSP) was assessed for the first time in sturgeon erythrocytes. Hsp70 and hsp90 expression was triggered by both stress and dietary supplementation. Indicators of non-specific immunity were modified mainly by stress. Complement activity increases with stress while lysozyme activity decreases, but to a lesser extent in supplemented fish. The antioxidant capacity increases with stress while oxidant metabolites decrease and overall oxidative stress was lower for fish that received dietary supplementation. The positive impact of dietary supplementation on health status was observable after a stress challenge. A principal component analysis was used to combine all the measured parameters and to observe patterns in physiological fish status. The four experimental groups of fish were clearly discriminated with this statistical tool. Physiological indicators from blood samples may enable heat stress, health, and welfare to be assessed in Siberian sturgeon.     

Molecular identification and characterization of the intervening sequences (IVSs) within 23S ribosomal RNA (rRNA) genes of Taylorella asinigenitalis isolated in France

In the helix 25 region, 32 French Taylorella asinigenitalis isolates carried at least one 23S rRNA gene not containing intervening sequences (IVSs). No IVSs in the region were identified in three isolates and the other remaining 29 isolates carried one or more IVSs (UCD-1(T)IVS1A, UCD-1(T)IVS1B and UK-1IVS1B) described already and two new kinds of IVS (TaIVS1C and TaIVS1D). In the helix 45 region, no T. asinigenitalis isolates not carrying any IVSs were identified. UK-1IVS2B was identified in the region from 26 isolates. Five new kinds of IVSs (TaIVS2D, E, F, G and H) occurred in the region in the 13 isolates. Distinctly different tandem repeat units (RS48 and RS32 and RS-A, -B and -C) were evident in both regions, respectively, from the French (n=32) and American (n=3) T. asinigenitalis isolates. Thus, several different kinds of tandem repeat units and their combinations in IVSs in both regions within the gene were shown in 32 French isolates.     

A decision support approach for cane supply management within a sugar mill area

Increased competition between agri-food supply chains has strained relationships between farmers and processing factories while reducing individual profit margins. Decisions at different levels of the supply chain can no longer be considered independently, since they may influence profitability throughout the supply chain. This paper presents a decision support approach based on the MAGI^® simulation tool, which aims to facilitate discussion and negotiation between stakeholders while collectively exploring satisfactory solutions.The simulation tool helps sugarcane growers and millers in designing and assessing new ways of organizing cane supply management within a mill area. It addresses key issues such as restructuring mill areas or changing cane delivery allocation rules in order to increase total sugar production and total net revenue at the mill area level. This approach has been implemented for two mills in Réunion and one mill in South Africa. Simulations showed that sugar gains may be obtained by rearranging supply scheduling according to quality-based zoning within a mill area. Discussions led to further studies regarding the practicality of the best scenarios. MAGI^® is now available as freeware for testing in different settings.     

Comparison of morphological traits and molecular markers to analyse diversity and structure of alfalfa (<Emphasis Type="Italic">Medicago sativa</Emphasis> L.) cultivars

Diversity and structure of populations may differ substantially between morphological traits and molecular markers. Explanations of such discrepancies are crucial for further progress in breeding as well as for the maintenance of genetic resources. Our objective was to compare indices of among-cultivars differentiation for morphological traits (Q_ST) and molecular markers (F_ST) in alfalfa (Medicago sativa), a legume forage species. Ten cultivars representing the Northern and Southern types commonly grown in Europe were investigated. For each cultivar, 40 genotypes were analysed with 16 SSR markers and four morphological traits measured in two locations and several cuts. Q_ST values were in general high (0.02–0.39) compared to the differentiation observed with molecular markers (F_ST = 0.01), especially for growth habit, indicating that morphological traits were more efficient to structure the diversity than molecular markers. For morphological traits, a clear separation of Northern and Southern cultivars was observed, whereas for molecular markers, no clear structure was detected. Nevertheless, the grazing type cultivar Luzelle was separated from the rest of the cultivars for both morphological traits and molecular markers. Although pairwise differences between cultivars were significant for both morphological traits and molecular markers, the main part of the variation was found within cultivars. This large within-cultivar variation may be explained, besides the outcrossing reproductive mode and autotetraploid genetics, by the recent history of M. sativa domestication in Europe and the frequent seed exchanges. Selection for morphological traits (Q_ST > F_ST) was achieved without modification of within-cultivar neutral diversity.     

An increase in the upper tree-limit of silver fir (Abiesalba Mill.) in the Alps since the mid-20th century: A land-use change phenomenon

Global environmental changes observed during recent decades are likely to have had an impact on the distribution of species. Currently, silver fir (Abies alba) is becoming established in the subalpine forests of the west central Alps at elevations higher than 2000 m a.s.l.; prior to the 1970s its upper altitudinal limit was 2000 m. Several hypotheses could explain this recent expansion of the upper tree-limit. Silver fir regeneration could be linked (1) to land-use changes or (2) to current climatic warming. Using dendrochronology, the age structure of 31 forest plots containing at least one silver fir was examined in order to elucidate the population dynamics of subalpine communities. This allowed us to decipher the timing of fir regeneration in relation to the mean age of the stands examined and of the other tree-canopy species present. The majority of the firs germinated sporadically since 1950, before the regional temperature increase. The pattern of fir recruitment did not appear to relate to altitude, but followed a pattern characteristic of secondary succession. The age structures identified showed an exponential increase in tree-density during the 20th century; the stands were first dominated by Larix decidua during the 18th and 19th centuries, and then by Pinus cembra during the 20th century. In most stands, fir regeneration occurred after Larix and before P. cembra dominated, following a similar pattern to Picea abies regeneration. The number of local inhabitants and temperature both exhibited a negative relationship with fir tree recruitment, thus supporting the land-use change hypothesis. There has been a significant upward shift of the altitudinal range of fir, amounting to an increase of about 300 m since 1950. This followed the abandonment of low-productivity land. This trend is likely to continue during the 21st century, because of new agricultural and forestry practices which involve limited intervention in low-productivity areas and may be because of the effects of global warming.