Can plot edge bias be reduced by means of airborne laser scanning?

This paper presents new methods for plot edge bias (PEB) correction of individual tree competition indices (CIs) using airborne laser scanning (ALS) as auxiliary information in multivariate ratio and multivariate regression models. I applied the methods to 557 plots from the Norwegian National Forest Inventory located in Hedmark County in South East Norway and compared them to the benchmarks methods linear expansion and simulated annealing by studying the individual tree growth predictions before and after PEB correction. Generally, the simulated annealing method seemed to improve growth prediction most and overall the existing methods performed better than those based on ALS. All PEB-correction methods tested gave minor changes in growth predictions and the absolute change in percent in adj. R² and Akaike's Information Criterion (AIC) was numerically small, with an average percentage change for the tested CIs between 1.8 for adj. R² and 0.6 for AIC of the observed values in the original data. The small differences in the results between the original data and the PEB-corrected data show that on average PEB remains a minor problem for individual tree growth prediction. Whether the results are valid for forests with significantly different spatial composition than that of this database remains to be confirmed.     

Relating Gas Dispersion in Porous Media to Medium Tortuosity and Anisotropy Ratio

Gas dispersion in a set of three different porous materials with similar particle size, as a function of material tortuosity and anisotropy ratio, was investigated. The materials were packed with different spatial orientations of the individual particles so as to create media with different tortuosity and anisotropy ratios. Three different media (slate chips, wood chips, and pebbles) and four particle orientations have been used to generate a total of nine different porous media mimicking single porosity, dual porosity isotropic, anisotropic, aggregated, or granular materials. Resulting values of tortuosity and anisotropy ratio for each medium were determined via measurements of gas permeability and molecular gas diffusion coefficient. These values were then compared to measured values of gas dispersivity for each medium. The results showed that dispersivity is inversely proportional to tortuosity but directly proportional to anisotropy ratio and that the relations were approximately linear within the range of tortuosities and anisotropy ratios investigated. Wood chips (dual porosity material) yielded higher values of gas dispersivity compared to slate chips (single porosity material). A likely reason is in part the difference in pore structure between the materials and in part a difference in particle surface roughness (which was highest for wood chips) both of which affects dispersion.     

Individual feeding specialisation of a naïve vs. veteran predators

Abstract – We explored the incidence of individual feeding specialisation among a naïve predator (non‐native rainbow trout postsmolts) and two native experienced predators (sea‐run Arctic charr and sea‐trout) in a subarctic Norwegian fjord. Interindividual foraging niche stability was obtained by combining information on stomach contents (recent dietary niche) with trophically transmitted parasite infestation (time‐integrated historical dietary niche) of individual predators. Individual fish showed a high degree of resource specialisation as prey items such as gammarids and small fish (both potential intermediate host of parasites) rarely co‐occurred in stomachs. In both naïve and veteran predators, positive associations between the intensity of a specific parasite species and the occurrence of their respective intermediate host (gammarids or fish) in the stomachs of individual predators demonstrated temporally interindividual feeding specialisations. Several behavioural phenotypes clearly co‐existed in both naïve and veteran predator populations, including gammaridivore (benthic feeders), piscivore (pelagic feeders) or insectivore (pleuston feeders) individuals. The likely mechanism of this observed interindividual resource specialisation in the non‐native naïve predators involves a behavioural component of which rapid learning seems to be a key factor.     

Upside-down swimming behaviour of free-ranging narwhals

Background

Free-ranging narwhals (Monodon monoceros) were instrumented in Admiralty Inlet, Canada with both satellite tags to study migration and stock separation and short-term, high-resolution digital archival tags to explore diving and feeding behaviour. Three narwhals were equipped with an underwater camera pod (Crittercam), another individual was equipped with a digital archival tag (DTAG), and a fifth with both units during August 2003 and 2004.

Results

Crittercam footage indicated that of the combined 286 minutes of recordings, 12% of the time was spent along the bottom. When the bottom was visible in the camera footage, the narwhals were oriented upside-down 80% of the time (range: 61100%). The DTAG data (14.6 hours of recordings) revealed that during time spent below the surface, the two tagged narwhals were supine an average of 13% (range: 9–18%) of the time. Roughly 70% of this time spent in a supine posture occurred during the descent.

Conclusion

Possible reasons for this upside-down swimming behaviour are discussed. No preference for a clockwise or counter-clockwise direction of roll was observed, discounting the possibility that rolling movements contribute to the asymmetric left-handed helical turns of the tusk.     

The Effect of Astaxanthin in Feed and Environmental Temperature on Carotenoid Concentration in the Gonads of the Green Sea Urchin Strongylocentrotus droebachiensis Müller

The aim of this study was to investigate the long term development of carotenoid concentration in gonads and gonad development of green sea urchins reared at different temperatures and fed formulated feed containing dwerent levels of astaxanthin. Urchins, sampled from a natural population, were reared under two different temperature regimes (7 C and 12 C) and fed formulated feed containing 0, 100 and 500 mg astaxanthin/kg feed, respectively. The study lasted 112 d. Astaxanthin was detected in the groups fed feed containing astaxanthm, but in low quantities. No effect of temperature was observed on the retention of astaxanthin. Echinenone values declined throughout the study, probably due to the lack of suitable metabolic precursor for production of echinenone. Water and lipid concentration in the gonads increased throughout the study indicating the progressions of gametogenesis and the generally improved nutritional status of the animals. No significant difference in gonad index (GI) due to treatment was observed but GI varied between the sexes with male GI increasing significantly faster compared to females.     

Sudden change in long‐term ocean climate fluctuations corresponds with ecosystem alterations and reduced recruitment in Norwegian spring‐spawning herring (Clupea harengus,Clupeidae)

Fish stocks vary in abundance. The causes behind the fluctuations may be difficult to determine, especially ones caused by natural fluctuations, but long‐term data series may provide indications of the mechanisms. Assessments show that the recruitment to the Norwegian spring‐spawning herring (Clupea harengus, Clupeidae) has remained low since 2004, a year which produced the last really rich year‐class. Long time‐series of estimated recruitment and mean winter temperature in the ocean showed a significant positive correlation for the period 1921–2004. Here, we show that this positive correlation did not continue from 2005 onwards as the winter temperature increased to high levels while herring recruitment decreased and has remained low. The density of zooplankton in the drift route of the herring larvae dropped significantly after 2004, and their centre of gravity shifted northwards. There may currently be heavy predation on the larvae by Atlanic mackerel (Scomber scombrus, Scombridae), and top‐down regulation is suggested to hamper successful recruitment. Our analysis indicates that the presence of food and overlap with high food concentrations are likely important regulators of survival in herring larvae. The findings may be important for future management and planning of fisheries of this stock because recruitment failure may continue if temperature remains high and food abundance remains low.     

Optimisation of gene expression analysis in Atlantic salmon lenses by refining sampling strategy and tissue storage

Analysis of gene expression in the lens is one of the analytical tools employed to investigate cataract formation in Atlantic salmon (Salmo salar L.). High quality RNA preparations are an essential prerequisite for gene expression analysis. The first aim of the present study was to investigate the possible effects of two methods of tissue preservation on the quality of RNA extracted from Atlantic salmon lenses. RNA was extracted from lenses either stored in RNAlater or flash-frozen in liquid nitrogen. Both tissue preservation methods yielded RNA of similarly high quality. The second aim was to examine if stress related to fish handling and the choice of anaesthesia during the sampling procedure affected gene expression in the lens. Six sampling procedures were tested on groups of sea water adapted Atlantic salmon smolt. Fish were either killed instantaneously (control group) or sampled after 30 min anaesthetised with isoeugenol, after 30 min without anaesthesia, after 120 min anaesthetised with isoeugenol, after 120 min with 15 min anaesthesia with metacaine or after 120 min without anaesthesia. The expression levels of specific genes, of special interest in the study of molecular mechanisms of cataractogenesis, were analysed in lenses by real-time RT–PCR. Fish not anaesthetised had significantly increased levels of heat shock protein 70 (HSP70) mRNA after 30 min compared to the control group. Glutathione reductase (GR) and manganese superoxide dismutase (Mn-SOD) were expressed at significantly lower levels in groups of Atlantic salmon sampled after 120 min anaesthetised with isoeugenol or metacaine, and anaesthetised with isoeugenol, metacaine or without anaesthesia, respectively. The same expression patterns were found in corresponding gill tissues for these two antioxidant genes. In conclusion, preservation in liquid nitrogen instead of RNAlater is recommended due to practical conditions in RNA extraction. A quick sampling protocol with the use of anaesthetics and not exceeding 30 min should be preferred to avoid effects of the sampling procedure on lens gene expression in Atlantic salmon.     

Movements and spatiotemporal distribution of escaped farmed and local wild Atlantic cod (Gadus morhua L.)

Commercial farming of Atlantic cod (Gadus morhua L.) is now being developed in several countries. The ecological consequences of cod culture are poorly understood, but recent research suggests that Atlantic cod are more prone to escape from net pens than Atlantic salmon. Here, we describe the movements and the spatiotemporal distribution of farmed cod after escape relative to wild cod, both during and outside the natural spawning season. The experimental design included simulating escape incidents of farmed cod tagged with acoustic transmitters and using an array of automatic listening stations to monitor their dispersal and distribution. For comparison, local wild cod were monitored using the same array of receivers. The farmed cod dispersed rapidly after a simulated escape, they randomly distributed over large areas and their distribution overlapped with local wild cod. Moreover, escaped farmed fish were found at local cod spawning areas during the spawning season. The study also indicated that the recapture rate of escaped farmed cod was high compared with that of escaped farmed salmon. Thus, while our results showed that there is a considerable potential for ecosystem effects caused by escaped farmed cod, mitigating actions such as an efficient recapture fishery for escapees may be possible.     

Directed search for plant constituents: a case study concerning flavonoids in Norway spruce

The reported content of flavonoids in the needles of Norway spruce, Picea abies, has been used as a basis for a directed search for compounds previously undetected in this species. Combined with advanced chromatographic methods and sensitive detection techniques, the directed search approach assisted in the identification of the novel flavonols, myricetin 3- O- (6-acetylglucoside) and syringetin 7- O-glucoside, and several other flavonoids isolated for the first time from this species.