Substitute and complement relations among various fish species in the Japanese market: implications for fishery resource management

A demand system analysis was conducted to examine the substitute relationships between tuna and skipjack tuna in the Japanese market. Data from the Annual Report on Family Income and Expenditure Survey from 1965 to 2006 were used for the analysis using the almost ideal demand system (AIDS). Results suggest that skipjack tuna can be a strong substitute for tuna, while other fish groups are not a clear substitute. Our analysis of substitute relationships among fish species in a market indicates that this is a factor that should be considered for better fisheries resource management. For instance, even under a situation where one fish species is underexploited, proper attention to its fishery management is necessary if the fish is a strong substitute for another popular fish species in the market.     

Assessment of environmental nitrogen pollution load potential from sewage treatment water in the Tedori River Alluvial Fan Area, Japan

An evaluation of the nitrogen pollution load potential (NPLP) arising from several sewage treatment systems in the Tedori River Alluvial Fan Area was evaluated by determining the removal percentage of nitrogen as a result of sewage treatment and amounts of nitrogen lost from the different treatment systems. These data were applied to the entire area resulting in an estimated total NPLP of 734 t year⁻¹ (10³ kg year⁻¹), of which 548 t year⁻¹ discharges into the Japan Sea and so does not contribute to the pollution of the environment considered here. The residual 186 t year⁻¹ of the NPLP has a high probability of causing groundwater or downstream pollution, with 58% of the NPLP being contributed from septic tanks not connected to public sewage systems. Rural sewage system accounted for about 18% of the NPLP. Material directly flowing into the middle stream of the Tedori River together with sewage water from small companies and untreated sewage water from local family dwellings made up about 3–12% of the NPLP. To improve water quality due to sewage effluent, it is essential to increase the number of connections to public sewage systems from septic tanks.     

Comparison of the amount of thiotrophic symbionts in the deep-sea mussel <Emphasis Type="Italic">Bathymodiolus septemdierum</Emphasis> under different sulfide levels using fluorescent in situ hybridization

Various invertebrates inhabiting hydrothermal vents harbor thiotrophic endosymbionts that provide the host with nutrients and are possibly involved in the detoxification of harmful sulfides. In this study, we first determined the partial 16S rRNA gene sequence of the thiotrophic symbiont of the deep-sea mussel Bathymodiolus septemdierum, a dominant species at hydrothermal vents in the Izu–Ogasawara (Bonin) area. We then designed a new probe, Bsob692, for fluorescent in situ hybridization (FISH) using regions completely conserved among thiotrophic symbionts of all bathymodiolin mussels and established the protocol for FISH to compare the distribution and amount of the symbiont using an image analysis program that is commercially available. We compared fluorescent intensity in the gill of the mussels collected at different sites and found a higher intensity in specimens collected from a site with higher sulfide concentration. We also compared mussels reared in the presence and absence of sulfide and found that the former had a higher fluorescent intensity.     

A set of near-isogenic lines for blast resistance genes with an Indica-type rainfed lowland elite rice (Oryza sativa L.) genetic background

A set of near-isogenic lines for blast resistance genes was developed by using an Indica-type elite rice variety, IR49830-7-1-2-2, suitable for the rainfed lowland conditions in the tropics, as a genetic background. Initially, we revealed that IR49830-7-1-2-2 harbors five blast resistance genes - Pia, Pib, Pik-s, Pita, and Pi11(t) - by using a differential system involving 19 selected standard blast isolates from the Philippines. Based on this result, we developed nine near-isogenic lines (NILs) targeting eight resistance genes - Pik, Pi7(t), Pi3, Pi5, Pita-2, Piz-5, Pish, and Pi9 - by recurrent backcrossing. The introgression of each resistance gene in the NILs was confirmed by reaction patterns to the blast isolates, allelism tests, and DNA marker analysis. In addition, a genome-wide DNA marker survey revealed that most of the chromosome regions in each NIL were of the IR49830-7-1-2-2 type. The agricultural characteristics of most of the developed NILs were almost the same as those of IR49830-7-1-2-2. Moreover, with one exception, they showed submergence tolerance similar to IR49830-7-1-2-2. The developed NILs could be used as a multiline variety suitable for the rainfed lowland in the tropics.     

Analysis of the nitrogen pollution load potential from farmland in the Tedori River Alluvial Fan Areas in Japan

A nitrogen balance study was carried out by setting up a test paddy in order to estimate the nitrogen pollution load potential (NPLP) from farmland in the Tedori River Alluvial Fan Areas and the load from the entire area under consideration was estimated using the cropping record and fertilizer application rate (FAR). The total NPLP was estimated to be 261 tons/year and the load from the paddy 79 tons/year for 5,704 ha, which would translate to an intensity of 14 kg/ha, while the load from the vegetable field was estimated to be 118 tons/year for 215 ha, which would equate to an intensity of 549 kg/ha. The pollution loads for the vegetables were significantly greater than those for the rice. The load for the barley was 57 tons/year for 261 ha (216 kg/ha) and that for the orchards was 23 tons/year for 64 ha (359 kg/ha). The estimation of soybean load was a negative 15 tons/year for 717 ha (−21 kg/ha), which meant that the nitrogen in the yield was greater than the FAR. The results also confirmed the yield absorption ratio in relation to the FAR. The load from the paddy for the entire area was also estimated using the percolation rate and the water quality load underneath the farmland was estimated to be 89 tons/year.     

Enzyme activity changes in relation to internal browning of Raphanus roots sown early and late

Summary

Early sown radish seedlings were subjected to heat stress from the middle to late growth stage. Roots exhibiting internal browning (IB) were more prevalent in the susceptible cultivars whose seeds were sown early in the summer compared with those which were sown late. However, IB occurrence in the resistant ones was not nearly so marked regardless of the sowing date. In the IB susceptible cultivars, higher levels of L-phenylalanine ammonia-lyase (PAL) and polyphenol oxidase (PPO) activities were detected in roots from the early sown plot (ESP), but these enyzme inductions did not occur to a significant extent in the resistant ones. Roots suffering internal browning were also detected to have pronounced increases in ascorbate peroxidase (APX) activity, but decreases in both dehydroascorbate reductase (DHAR) and glutathione reductase (GHAR) activities. These observations strongly suggest that a decline in H₂O₂ decomposing capacity of the ascorbate-glutathione cycle by heat stress is responsible for the activation of H₂O₂ detoxyifying pathway derived from PPO.     

Bartonella species in wild rodents and fleas from them in Japan

The purpose of this study was to assess the role of fleas for transmission of Bartonella species among wild rodents in Japan. Flea samples were collected from wild rodents and examined genetically for Bartonella infection. Bartonella DNA was detected from 16 of 40 (40.0%) flea samples. Sequence analysis demonstrated that 3 of 16 (18.8%) of the Bartonella-positive animals were infested with fleas from which the closely related Bartonella DNA sequence was detected, indicating that the fleas acquired Bartonella from the infested rodents. The DNA was detected in hemolymph, the midgut and the ovary (only in female), indicating that Bartonella might be colonized through the midgut and distributed into the body.     

Antimicrobial susceptibilities of Listeria monocytogenes isolated in Japan

The antimicrobial susceptibility of 201 Listeria monocytogenes isolates from foods, environments, animals and human patients in Japan was determined. All isolates were susceptible to ampicillin, the first choice of drug for listeriosis treatment, chloramphenicol, dihydrostreptomycin, erythromycin, enrofloxacin, gentamicin, kanamycin, lincomycin, nosiheptide, salinomycin, vancomycin, and virginiamycin. A human strain was resistant to oxytetracycline. The Minimum Inhibitory Concentration (MIC) for 50% of the strains and the MIC for 90% of the strains were comparable in all the isolates. This is the first investigation to compare antibiotic resistances between isolates from foods and isolates from human patients in Japan. The result showed that most of the isolates were susceptible to antibiotics used in this study.     

The antagonist activity of lipid IVa on the stimulation by lipid A of TNF-alpha production from canine blood mononuclear cells

Lipid A, the active component of lipopolysaccharide (LPS), exists in the outer membrane of Gram-negative bacteria and binds to the Toll-like receptor 4 (TLR4) and MD-2 complex. On the other hand, the synthetic precursor of Escherichia coli lipid A, tetraacylated lipid IVa, is an agonist for TLR4 and MD-2 complex in murine, equine and feline cells but is an antagonist for lipid A in human cells. The aim of the study was to examine the function of canine Toll-like receptor 4 (TLR4) and MD-2 complex on canine blood mononuclear cells (BMC), by analyzing lipid A- or lipid IVa-induction of TNF-α production from these cells in order to understand canine innate immune system. After 5-h culture of canine BMC with lipid A (lipid A culture) or lipid IVa (lipid IVa culture), the TNF-α, as determined by ELISA, had increased in the supernatants of the lipid A cultures in a dose-dependent manner, whereas the TNF-α was undetectable in supernatant of lipid IVa-treated cultures. The TNF-α was statistically significantly different between the lipid A and lipid IVa cultures (100 and 1000 ng/ml). TNF-α production from canine BMC was inhibited, in a lipid IVa-dose-dependent manner, when the BMC were pre-cultured with lipid IVa for 60 min and then cultured with lipid A for 5h, while in control BMC cultures production if TNF-α was unchanged. These results indicate that the TNF-α production stimulated by lipid A was competed out by pre-exposing the BMC to lipid IVa. Thus, lipid A is an agonist for TNF-α production in canine BMC, whereas lipid IVa appears to be an antagonist against this lipid A stimulation of canine BMC.