Molecular characterisation of quinolone resistance in Escherichia coli from animals in Turkey

The aim of this study were to detect the gyrA, parC and marR mutations and qnr genes (qnrA, qnrB and qnrS) in 120 strains of Escherichia coli isolated from animals. European Committee on Antimicrobial Susceptibility Testing and Clinical Laboratory Standards Institute disc diffusion and minimum inhibitory concentration (MIC) tests, respectively, were used to determine fluoroquinolone (FQ) resistance, and molecular methods were used to detect the mutations and the genes. E coli isolates with an MIC of ≥8 mg/l had mutation at Ser-80 in parC in addition to mutations at Ser-83, Asp-87 or both in gyrA. The nucleotide change was detected in marR (Ser-3?→?Asn, Ala-53?→?Glu, Gly-103?→?Ser, Tyr-137?→?His). Only four E coli isolates (3.3 per cent) contained qnrA and qnrS, and qnrB was not detected. Two E coli isolates from healthy calves also contained qnrA and qnrS. The MICs of enrofloxacin and danofloxacin for qnr-containing E coli isolates ranged from 32 mg/l to 256 mg/l. The results of this study indicated that the FQ-resistant E coli isolates presented an alteration in gyrA (Ser-83?→?Leu, Asp-87?→?Asn) and parC (Ser-80?→?Ile) with high MICs (8-256 mg/l), and there was a low prevalence of qnr genes among E coli isolated from animals.     

A cytotoxic triterpenoid saponin from under-ground parts of Gypsophila pilulifera Boiss.& Heldr

A cytotoxic triterpenoid saponin was isolated from the under-ground parts of Gypsophila pilulifera Boiss.& Heldr. (Caryophyllaceae) naturally grow in the southwestern region of the Turkey. The structures of saponin was elucidated as 3-O-β-D-galactopyranosyl-(1→2)-[β-D-xylopyranosyl-(1→3)]-β-D-glucuronopyranosyl quillaic acid 28-O-β-D-glucopyranosyl-(1→3)-[β-d-xylopyranosyl-(1→4]-α-l-rhamnopyranosyl-(1→2)-β-D-fucopyranosyl ester on the basis of extensive spectral analysis and chemical evidence. The separated triterpenoid saponin was isolated from Gypsophila pilulifera for the first time. The saponin compound displayed significant cytotoxicity against A549 cell line with IC(50) values >16μM.     

Trace Elements and Heavy Metals in Asian Rice-Derived Food Products

With the increase in the occurrence of heavy metal polluted rice in Asian countries, food safety of rice products is of utmost concern to consumers. The current study discusses the distribution of trace elements Cr, Cu, Zn, As, Se, Cd, Hg, and Pb in Asian rice-derived food products. Three types of food products, rice noodles, rice vinegar/wine, and rice snacks, were chosen for examination. Most toxic heavy metals and metalloid such as As, Cd, Hg, and Pb were found to be within the safe level of EPA. Since rice vinegar/wine is not the staple food for people, there is no noticeable safety concern. Rice noodles and snacks are consumed with noticeable Se content and they are possible for human Se source addition. With comparison with raw rice, rice-derived food products showed better quality in terms of toxic heavy metals and metalloids. This study is for the first time reporting a thorough understanding of safety concern of rice-derived food products. It provides baselines and understanding on current levels of trace elements and heavy metals in Asian-derived rice products as affected by food processes. It would also help consumers build up confidence on the food safety of Asian rice products.     

Determination of chemical profile, antioxidant, DNA damage protection and antiamoebic activities of Teucrium polium and Stachys iberica

This work deals with the evaluation of in vitro antioxidant, DNA preventing and antiamoebic activities of the water extracts of Teucrium polium and Stachys iberica. In all systems, T. polium extract exhibited excellent activity potential than that of S. iberica. The amount of total phenolics and flavonoids were high in this extract. In the presence of 40 mg/ml T. polium extract, a significant protection was observed for native super coiled DNA of pBR322 plasmid DNA. In the presence of 32 mg/ml of T. polium extract, no trophozoite was after the 24th hour.     

A study of peripheral blood in hedgehogs in Turkey

The aim of this study was to determine diameters of blood cells, differential counts of peripheral blood leukocytes, alpha-naphthyl acetate esterase (ANAE), acid phosphatase (ACP-ase) activity of some leukocyte types, and enzymatic positivity percentages of peripheral blood lymphocytes in two hedgehogs species, Hemiechinus auritus, the long-eared hedgehog, and Erinaceus concolor, the southern white-breasted hedgehog. Air-dried peripheral blood smears were stained with May-Grünwald-Giemsa stain. ANAE and ACP-ase were stained in glutaraldehyde-acetone-fixed smears. ANAE-positive lymphocytes displayed a dot-like positivity pattern characterized with 1-5 reddish brown cytoplasmic granules, whereas ACP-ase positive lymphocytes displayed a dot-like positivity pattern characterized with 1-3 pinkish cytoplasmic granules. Monocytes gave a diffuse and strong reaction while neutrophils displayed a weak positive reaction for ANAE and ACP-ase. No difference was observed in mean diameters of peripheral blood cells of these species. It was found that lymphocytes made up the majority (64.3% and 65.5%) of leukocytes, followed by neutrophils (23.9% and 23.3%), eosinophils (9.0% and 7.6%), monocytes (1.8% and 2.3%), and basophils (1.0% and 1.3%) in H. auritus and E. concolor, respectively. Mean ANAE positivity oflymphocytes was 36.6% and 51.3% and ACP-ase positivity was 32.1% and 37.5% for H. auritus and E. concolor, respectively. The ANAE positivity of lymphocytes in E. concolor was significantly (P < 0.05) higher than that of H. auritus.     

Influence of growing area and harvest date on the organic acid composition of olive fruits from Gemlik variety

Organic acids (oxalic, citric, galacturonic, tartaric, malic, lactic and succinic) contents of Gemlik variety olive fruits from five different cultivation areas of South Anatolia (Turkey), harvested in six collection dates (September, October and November of crop years 2006 and 2007), were determined by HPLC/DAD. Citric acid was the major compound (∼45%), followed by succinic (19%) and galacturonic acids (∼16%). The olive fruits of Antalya location showed the lowest and Karaman, Alanya and Hatay locations had the highest levels of total organic acids, especially on the early and late harvest. Significant interactions between “location”, “harvest date” and “crop year” were found, regarding the concentrations of citric, lactic, oxalic, tartaric and malic acid (3-way and 2-way interactions), which means that the effect of one factor (e.g. “location”) on an acid's concentration is not constant across the levels of the other factor. For succinic and galacturonic acids's concentrations, all interactions between the considered factors were statistically significant, except the 2-way interaction between “harvest date” and “crop year” which was no significant, meaning that the effect of factor “harvest date” on the succinic and/or on the galacturonic acid's concentrations does not vary significantly from one level of factor “crop year” to other. Significant mean differences were found in the concentrations of individual organic acids according to harvest time, which indicated generally a decline as harvest date moved on or no significant changes in some cases. Our results showed that rainfall and altitude of the location seemed to have more marked effects than temperature, on the levels of some organic acids such as malic, oxalic and succinic acids. The grouping of locations formed in Principal Component Analysis were quite different according to crop years, as for the first crop year (2006) “oxalic, citric, tartaric and succinic” and “lactic, malic, galacturonic” acids were the two groups of variables mainly responsible for discrimination, while for the following crop year (2007) “galacturonic, tartaric, oxalic, lactic”; “succinic, citric” and “malic” acids were the three groups responsible for the formation of clusters.     

Polypeptide Alteration During The Cold Stratification In Mazzard Seed

Many seeds of woody plants require low temperature for germination and that’s called seed dormancy has been investigated for relations of proteins by several researchers. We determined polypeptide profiles of cold-stratified Mazzard seeds. Seeds were studied in five different periods: seeds in dormancy (none stratified), 30, 60, 90 and 120 days cold-stratified. Polyacrylamide gel electrophoresis in the presence of sodium dodecyl sulfate (SDS-PAGE) of the soluble protein fractions from stratified and none stratified seeds was utilized for determination of changes in polypeptides. SDS-PAGE revealed a decrease in the concentrations of 14 polypeptides and appearance of four low-molecular weight (15.1, 16.3, 17.8 and 19.4?kDa) polypeptides were determined in 90 and 120 day stratified seeds. The study results exhibited the evidences of the involvement of protein changes in response of Mazzard seeds during cold stratification.     

Sarcomatoid renal cell carcinoma with scant epithelial components in an Angora cat

CASE HISTORY: A 6-year-old, neutered, female Angora cat presented with a history of lethargy and anorexia for 2 months and a clinically palpable and gradually enlarging, solid mass in the abdominal cavity extending from the last costal arch to the pelvic cavity.

CLINICAL FINDINGS: Examination of the cat revealed jaundice, dehydration and hypothermia. Haematological manifestations included lymphopenia and substantial decrease in haematocrit value. Biochemical analysis of the blood revealed hypoglycaemia, three-fold elevated blood urea nitrogen values, increased level of serum aspartate aminotransferase and increased total bilirubin while the creatinine level was normal. Ultrasonographic examination of the abdomen showed a disrupted and large hypoechoic area around the left kidney. The cat was anaesthetised and the left kidney was removed, but the cat died following surgery.

PATHOLOGICAL FINDINGS: On post-mortem examination, the left kidney was markedly enlarged and both the cortical and medullary parenchyma were replaced by confluent, multilobulated, pale tan-white, firm nodular masses protruding above the capsular surface. Metastasis was not observed. Cytological examination revealed a population of spindle-shaped cells of variable size, with abundant coarse chromatin and occasionally prominent nucleoli. Initial sections of the kidney were indicative of undifferentiated sarcoma confirmed by immunohistochemistry revealing vimentin-positive and cytokeratin-negative results in all tumour tissues. Additional sections showed very small amounts of both cytokeratin-positive and vimentin-positive areas.

DIAGNOSIS: Sarcomatoid renal cell carcinoma (SRCC) with scant epithelial components originating from left kidney.

CLINICAL RELEVANCE: Clinical and pathological features were similar to those of human SRCC, even though there was no evidence of metastases. Immunohistochemistry for vimentin and cytokeratin may be useful for definitive diagnosis of renal cell carcinoma with sarcomatoid differentiation, although staining of sections from several different parts of the tumour may be necessary. When a primary renal tumour is presented, SRCC should be considered as this diagnosis may influence treatment protocols and the clinical outcome.     

Effects of Different Dietary Lipid Sources on the Survival, Growth, and Fatty Acid Composition of South American Catfish, Pseudoplatystoma fasciatum, Surubim, Juveniles

The present study examines the effect of four semi‐purified diets (casein–gelatin based) where the source of fatty acids was free (esterified) oleic acid and linoleic acid (LA) (LOA diet), linseed and olive oil (predominantly LA and linolenic acid) (LO diet), cod liver oil (rich in highly unsaturated fatty acids) (CLO diet), and soybean lecithin (phospholipids; mostly LA) (LE diet) on the growth of juvenile South American catfish (surubim, Pseudoplatystoma fasciatum, Pimelodidae) (0.98 ± 0.04 g individual weight). Fish were fed at a restricted–readjusted feeding rate for 8 wk. At the end of the experiment, LE‐diet‐fed fish grew significantly larger than those of the other three groups (P < 0.05). Considerable cannibalism was observed in all the treatments. It is suggested that the quantitative growth performance may possibly change under other conditions, with less or no cannibalism. Survival did not differ significantly among the fish fed four different diets. Muscle and liver lipid contents did not vary among dietary treatments (P > 0.05), but whole‐body lipid concentrations were affected by dietary treatments. Fish fed LE diet contained significantly lower lipid level than those fed three other diets (P < 0.05). Muscle and liver fatty acid profiles reflected dietary fatty acid composition. Arachidonic acid level was significantly higher in muscle and liver of fish fed LOA and LE diets than in those fed LO and CLO diets. The results suggest that the efficiency of elongation and desaturation of 18C fatty acids depends on the dietary lipid source, and South American catfish has considerable capacity to transform linoleate to arachidonate.