A persistent oxygen anomaly reveals the fate of spilled methane in the deep Gulf of Mexico

Methane was the most abundant hydrocarbon released during the 2010 Deepwater Horizon oil spill in the Gulf of Mexico. Beyond relevancy to this anthropogenic event, this methane release simulates a rapid and relatively short-term natural release from hydrates into deep water. Based on methane and oxygen distributions measured at 207 stations throughout the affected region, we find that within ~120 days from the onset of release ~3.0 × 10(10) to 3.9 × 10(10) moles of oxygen were respired, primarily by methanotrophs, and left behind a residual microbial community containing methanotrophic bacteria. We suggest that a vigorous deepwater bacterial bloom respired nearly all the released methane within this time, and that by analogy, large-scale releases of methane from hydrate in the deep ocean are likely to be met by a similarly rapid methanotrophic response.     

Paleoindian seafaring, maritime technologies, and coastal foraging on California's Channel Islands

Three archaeological sites on California's Channel Islands show that Paleoindians relied heavily on marine resources. The Paleocoastal sites, dated between ~12,200 and 11,200 years ago, contain numerous stemmed projectile points and crescents associated with a variety of marine and aquatic faunal remains. At site CA-SRI-512 on Santa Rosa Island, Paleocoastal peoples used such tools to capture geese, cormorants, and other birds, along with marine mammals and finfish. At Cardwell Bluffs on San Miguel Island, Paleocoastal peoples collected local chert cobbles, worked them into bifaces and projectile points, and discarded thousands of marine shells. With bifacial technologies similar to those seen in Western Pluvial Lakes Tradition assemblages of western North America, the sites provide evidence for seafaring and island colonization by Paleoindians with a diversified maritime economy.     

Community food security: Practice in need of theory?

Practitioners and advocates of community food security (CFS) envision food systems that are decentralized, environmentally-sound over a long time-frame, supportive of collective rather than only individual needs, effective in assuring equitable food access, and created by democratic decision-making. These themes are loosely connected in literature about CFS, with no logical linkages among them. Clear articulation in a theoretical framework is needed for CFS to be effective as a guide for policy and action. CFS theory should delimit the level of analysis (i.e., what are the boundaries of community); show how CFS relates to individual, household, and national food security and explain emergent properties, which are important at the community level of analysis; point to the best indicators of CFS or its lack; clarify the determinants of CFS; and clarify the stages of movement toward CFS. This theoretical base would allow researchers to develop valid and reliable measures, and allow practitioners to weigh alternative options to create strategic plans. A theoretical base also would help establish common ground with potential partners by making the connections to anti-hunger work, sustainable agriculture, and community development clear.     

Distinct kinetic changes in neurotransmitter release after SNARE protein cleavage

Neurotransmitter release is triggered by calcium ions and depends critically on the correct function of three types of SNARE [soluble N-ethylmaleimide-sensitive factor attachment protein (SNAP) receptor] proteins. With use of the large calyx of Held presynaptic terminal from rats, we found that cleavage of different SNARE proteins by clostridial neurotoxins caused distinct kinetic changes in neurotransmitter release. When elevating calcium ion concentration directly at the presynaptic terminal with the use of caged calcium, cleavage of SNAP-25 by botulinum toxin A (BoNT/A) produced a strong reduction in the calcium sensitivity for release, whereas cleavage of syntaxin using BoNT/C1 and synaptobrevin using tetanus toxin (TeNT) produced an all-or-nothing block without changing the kinetics of remaining vesicles. When stimulating release by calcium influx through channels, a difference between BoNT/C1 and TeNT emerged, which suggests that cleavage of synaptobrevin modifies the coupling between channels and release-competent vesicles.     

Dual origin of tissue-specific progenitor cells in Drosophila tracheal remodeling

During Drosophila metamorphosis, most larval cells die. Pupal and adult tissues form from imaginal cells, tissue-specific progenitors allocated in embryogenesis that remain quiescent during embryonic and larval life. Clonal analysis and fate mapping of single, identified cells show that tracheal system remodeling at metamorphosis involves a classical imaginal cell population and a population of differentiated, functional larval tracheal cells that reenter the cell cycle and regain developmental potency. In late larvae, both populations are activated and proliferate, spread over and replace old branches, and diversify into various stalk and coiled tracheolar cells under control of fibroblast growth factor signaling. Thus, Drosophila pupal/adult tissue progenitors can arise both by early allocation of multipotent cells and late return of differentiated cells to a multipotent state, even within a single tissue.     

Bodensystematik und Bodenklassifikation Teil I: Grundbegriffe

Soil systematics and classification systems Part I: Fundamentals Soil‐ordering systems are primarily based and developed on one of two underlying principles: They are either categorized according to soil‐forming processes, or the formation of categories develops by chosen parameters. This perspective has already been established in the literature, though it is often confusing as many terms are defined and applied differently. In this contribution, the various definitions of systematics, classification, taxonomy, and identification will be clearly differentiated and summarized. The core of our work is to clearly define and contrast three terms: systematics, classification, and identification. Systematics is the fundamental scientific and deductive ordering of objects into systematic units. The purpose of this approach is to organize the entire spectrum of knowledge within a discipline into a transparent and manageable form. Classification, in direct contrast to systematics, is goal‐oriented and an inductive ordering of objects. Thus, the ordering scheme consists of classes which are clearly parameterized. Identification is the ordering of new objects into an already existing systematics or classification system. Close attention is paid to both the differences and the similarities between a systematics and a classification system, especially pertaining to their practical applications. The identification requires that the category‐forming characteristics can be measured (e.g., for soil systematics, these are the soil‐forming processes and factors). Currently, it is unfortunately not feasible to objectively quantify most soil‐forming processes. Thus, most attempts at categorizing soils by systematics are hypothetical and highly subjective in nature. The resulting identification derived from the soil systematics approach is open to questions and contestable, since a graded measuring system does not yet exist to verify these determinations. In contrast, a soil‐classification system does allow an objective soil‐profile identification, although such systems are conceived pragmatically and designed for a practical purpose (e.g., not scientifically based on process intensities). Unfortunately, such a classification system cannot be applied as a universal scientific categorization system due to this method of conception. Both categorization approaches are required in soil science in order to satisfy both the practical and the scientific aspects of the field. However, substantial research must be done to complete and verify systematics. The only viable short‐term solution is through the development of a graded classification system where the categories of the system are directly derived from the current systematics approach. In the long run both the exact investigation and the detailed modeling of the soil‐forming processes are inevitable.     

Poorly crystalline mineral phases protect organic matter in acid subsoil horizons

Soil minerals are known to influence the biological stability of soil organic matter (SOM). Our study aimed to relate properties of the mineral matrix to its ability to protect organic C against decomposition in acid soils. We used the amount of hydroxyl ions released after exposure to NaF solution to establish a reactivity gradient spanning 12 subsoil horizons collected from 10 different locations. The subsoil horizons represent six soil orders and diverse geological parent materials. Phyllosilicates were characterized by X-ray diffraction and pedogenic oxides by selective dissolution procedures. The organic carbon (C) remaining after chemical removal of an oxidizable fraction of SOM with NaOCl solution was taken to represent a stable organic carbon pool. Stable organic carbon was confirmed as older than bulk organic carbon by a smaller radiocarbon (¹⁴C) content after oxidation in all 12 soils. The amount of stable organic C did not depend on clay content or the content of dithionite–citrate-extractable Fe. The combination of oxalate-extractable Fe and Al explained the greatest amount of variation in stable organic C (R² = 0.78). Our results suggest that in acid soils, organic matter is preferentially protected by interaction with poorly crystalline minerals represented by the oxalate-soluble Fe and Al fraction. This evidence suggests that ligand exchange between mineral surface hydroxyl groups and negatively charged organic functional groups is a quantitatively important mechanism in the stabilization of SOM in acid soils. The results imply a finite stabilization capacity of soil minerals for organic matter, limited by the area density of reactive surface sites.