Biogeochemical cycling bacterial activity in response to lime and fertilizer applications in pond systems

Lime-induced changes of biogeochemical cycling bacteria were examined using doses of 25, 50, 100, 200, 500, 1000 and 2000 kg ha^–1 in the first part, and post-lime inorganic and organic fertilization in the second part of the experiment. Heterotrophic, ammonifying, denitrifying, cellulose decomposing and phosphate solublizing bacteria were drastically reduced by 30–90% in 1000 kg ha 21and 51D91% in 2000 kg ha^–1. Density differences were minor in the remaining test doses for all groups of bacteria except for the dinitrifiers which were reduced in 500 kg ha^–1 by 90% over the control. Similarly, reduced rates of ammonification, nitrification and denitrification were dose-dependent. Inorganic fertilization following lime application of 2000 kg ha^–1 resulted in no marked increment of the counts of bacteria and activity processes, whereas organic manuring increased the density (50–200%) and the activities (212–292%) as well. Lime-induced changes of bacterial population and activities were explained as a result of high pH stress as well as a major shift in the CO₂-HCO₃-CO₃ equilibrium system. Increase of major nutrients in the post-lime organic treatment was significantly higher than that of inorganic fertilization resulting in favourable N/P ratio and water quality conducive to fish farming after 45 days of liming.     

The utility of the ‘Arable Weeds and Management in Europe’ database: Challenges and opportunities of combining weed survey data at a European scale

Over the last 30 years, many studies have surveyed weed vegetation on arable land. The ‘Arable Weeds and Management in Europe’ (AWME) database is a collection of 36 of these surveys and the associated management data. Here, we review the challenges associated with combining disparate datasets and explore some of the opportunities for future research that present themselves thanks to the AWME database. We present three case studies repeating previously published national scale analyses with data from a larger spatial extent. The case studies, originally done in France, Germany and the UK, explore various aspects of weed ecology (community composition, management and environmental effects and within-field distributions) and use a range of statistical techniques (canonical correspondence analysis, redundancy analysis and generalised linear mixed models) to demonstrate the utility and versatility of the AWME database. We demonstrate that (i) the standardisation of abundance data to a common measure, before the analysis of the combined dataset, has little impact on the outcome of the analyses, (ii) the increased extent of environmental or management gradients allows for greater confidence in conclusions and (iii) the main conclusions of analyses done at different spatial scales remain consistent. These case studies demonstrate the utility of a Europe-wide weed survey database, for clarifying or extending results obtained from studies at smaller scales. This Europe-wide data collection offers many more opportunities for analysis that could not be addressed in smaller datasets; including questions about the effects of climate change, macro-ecological and biogeographical issues related to weed diversity as well as the dominance or rarity of specific weeds in Europe.     

Effect of varying dietary protein levels on growth and production of Chanos chanos (Forsskal) in inland saline groundwater: laboratory and field studies

Two experiments were conducted to investigate the effects of varying dietary protein (35–45%) and energy levels (17.34–19.44 kJ g⁻¹) on the growth performance of milkfish (Chanos chanos) maintained under laboratory (experiment 1) and field conditions (Experiment 2) in inland saline groundwater. The results of experiment 1 (initial weight of fish: 0.25 g) revealed that, irrespective of the protein source (fish meal or processed full fat soybean), fish fed a diet containing 40% protein showed significantly (p<0.05) higher growth in terms of live weight gain and specific growth rate, low feed conversion ratio [1.71 (fish meal) and 1.58 (soybean)], high nutrient retention (gross protein retention: 28.59 and 31.05%; gross energy retention: 24.23 and 26.04%), apparent protein digestibility (81.74 and 85.91%) and digestive enzyme activity (specific protease and amylase). An observation on the postprandial excretion of metabolites (N–NH₄ and o–PO₄) indicated significantly (p<0.05) low levels of these metabolites in aquaria where the fish were fed 40% dietary protein irrespective of the protein source. The results of experiment 2 also indicate (initial weight of fish: 4.43 g) a significantly (p<0.05) higher growth performance (weight gain, biomass, specific growth rate, growth day⁻¹ and fish production) in ponds where the fish were fed 40% dietary protein. Irrespective of the experimental conditions (laboratory/field), feeding the fish higher dietary protein levels (beyond 40%) not only repressed growth performance but also affected proximate composition by lowering protein accumulation and energy assimilation. An investigation on the effects of feeds on water quality parameters revealed that values for total alkalinity, NH₄–N, NO₃–N, turbidity, total dissolved solids and parameters indicative of productivity (chlorophyll a, net primary productivity and plankton population) increased significantly (p<0.05) from treatments 1–3 (35–40% protein) and declined thereafter, in treatment 4 (42% dietary protein), indicating that water quality characteristics correlated well with fish growth. The results suggest that in order to obtain a high-yield in milkfish culture system the fish should be fed supplementary diets containing appropriate (40%) protein levels, especially when the stocking rates are high.     

Occurrence of filaria in domestic dogs of Samburu pastoralists in Northern Kenya and its associations with canine distemper

Samples of blood (serum, smears and blood preserved with ethanol) were collected from dogs during a vaccination campaign in northern Kenya in the years 2006 and 2007. Blood was screened for filarial parasites using molecular and microscopy methods and sera were tested for antibodies against canine distemper virus (CDV). Parasitological examination revealed the presence of two species of canine filariae: Acanthocheilonema dracunculoides and A. reconditum. The DNA from the former species was detected in 58% dogs sampled in 2006 and 36% dogs sampled in 2007, whereas the latter was found only in 4.2% samples collected in 2007. Microfilariae were found in 33.8% blood smears collected in 2006 and 10.6% blood smears collected in 2007. The seroprevalence of CDV was 33.4% in 2006 and 11.2% in 2007. The effect of sex, age and CDV-seropositivity/seronegativity on the occurrence of A. dracunculoides was evaluated. Infection by A. dracunculoides was more common in males and in dogs with a positive antibody titer for canine distemper, but evenly distributed among different age groups. The difference in the prevalence of A. dracunculoides in two isolated mountain ranges was not statistically significant. Methodologies available for detection and determination of canine filariae are compared, underlining methodical pitfalls arising through the determination of less common filarial species. The role of single epidemiological factors and possible association between canine distemper and filariasis are discussed.     

Effects of milling and baking technologies on levels of deoxynivalenol and its masked form deoxynivalenol-3-glucoside

The co-occurrence of the major Fusarium mycotoxin deoxynivalenol (DON) and its conjugate deoxynivalenol-3-glucoside (DON-3-Glc) has been documented in infected wheat. This study reports on the fate of this masked DON within milling and baking technologies for the first time and compares its levels with those of the free parent toxin. The fractionation of DON-3-Glc and DON in milling fractions was similar, tested white flours contained only approximately 60% of their content in unprocessed wheat grains. No substantial changes of both target analytes occurred during the dough preparation process, i.e. kneading, fermentation, and proofing. However, when bakery improvers enzymes mixtures were employed as a dough ingredient, a distinct increase up to 145% of conjugated DON-3-Glc occurred in fermented dough. Some decrease of both DON-3-Glc and DON (10 and 13%, respectively, compared to fermented dough) took place during baking. Thermal degradation products of DON, namely norDON A, B, C, D, and DON-lactone were detected in roasted wheat samples and baked bread samples by means of UPLC-Orbitrap MS. Moreover, thermal degradation products derived from DON-3-Glc were detected and tentatively identified in heat-treated contaminated wheat and bread based on accurate mass measurement performed under the ultrahigh mass resolving power. These products, originating from DON-3-Glc through de-epoxidation and other structural changes in the seskviterpene cycle, were named norDON-3-Glc A, B, C, D, and DON-3-Glc-lactone analogically to DON degradation products. Most of these compounds were located in the crust of experimental breads.     

Elastomeric transistor stamps: reversible probing of charge transport in organic crystals

We introduce a method to fabricate high-performance field-effect transistors on the surface of freestanding organic single crystals. The transistors are constructed by laminating a monolithic elastomeric transistor stamp against the surface of a crystal. This method, which eliminates exposure of the fragile organic surface to the hazards of conventional processing, enables fabrication of rubrene transistors with charge carrier mobilities as high as approximately 15 cm2/V.s and subthreshold slopes as low as 2nF.V/decade.cm2. Multiple relamination of the transistor stamp against the same crystal does not affect the transistor characteristics; we exploit this reversibility to reveal anisotropic charge transport at the basal plane of rubrene.     

Comparison of approaches towards ecotoxicity evaluation for the application of dredged sediment on soil

Purpose

The toxicity of 36 dredged sediments from the Czech Republic was investigated using a large battery of bioassays. The aim of this study was to investigate the feasibility of ecotoxicity testing in general and of individual bioassays more specific and to investigate how the results of bioassays are determined by the physicochemical properties of sediment samples and/or sediment contamination.

Material and methods

In 2008 and 2010, 36 sediment samples were collected from rivers and ponds and from sediment heaps in different parts of the Czech Republic. Both their physicochemical properties and their levels of contamination with POPs and heavy metals were analyzed. The ecotoxicities of the sediments were evaluated using the four bioassays from the new Czech directive 257/2009 Coll. concerning the application of dredged sediments on agricultural land (Enchytraeus crypticus reproduction, Folsomia candida reproduction, Lactuca sativa root elongation, and potential ammonium oxidation). The results of the four directive bioassays were compared with the results of other soil bioassays (Caenorhabditis elegans mortality, Eisenia fetida avoidance and reproduction) and eluate bioassays (Daphnia magna immobilization, Pseudokirchneriella subcapitata growth inhibition test, and Vibrio fischeri luminescence).

Results and discussion

We demonstrate that the battery suggested in Czech directive 257/2009 Coll. is highly effective in identifying toxic samples; these bioassays clearly revealing different types of toxicity and different exposure routes. Shorter alternative bioassays may be added especially when fast toxicity identification is needed. Eluate bioassays identified samples potentially hazardous to aquatic ecosystems. Their inclusion into the assessment scheme should be considered if the goal of assessment is also the protection of aquatic ecosystems. The results of our multivariate analysis show that specific physicochemical properties and contamination may affect bioassay responses. C. elegans was the most sensitive bioassay to physicochemical properties and also to organic contamination, while eluate bioassays were sensitive to heavy metal pollution.

Conclusions

Most effects detected by the bioassays could not be explained by the levels of toxicants measured or by the natural characteristics of sediments. Our results show that bioassays are irreplaceable in dredged sediment risk assessment because they complement information provided by chemical analyses.     

Responses of phosphate solubilizing bacteria to qualitatively different fertilization in simulated and natural fish ponds

The growth of phosphate solubilizing bacteria (PSB) was examined inresponse to pond fertilization with poultry dropping (PD) (12,500 kgha^–1 y^–1), cattle manure (CM) (25,000 kg ha^–1 y^–1), inorganic fertilizer (IF) consisting of urea (10.83 kg ha^–1 y^–1) and single super phosphate (43.52 kg ha^–1 y^–1) and inorganic-organic mixed fertilizers (PD:CM:IF – 1:1:1) in simulated fish ponds under alluvial and laterite soil conditions as well as in natural pondslocated in alluvial soil zone. The high correlation between dissolved oxygenand density of PSB implied the contribution of the latter in the aerobicorganic decomposition. The PSB were maximal in the PD, and minimal in theIF treatments. The distribution pattern of PSB was related to theautochthonous C/N ratio and the N/P ratios of water. Relatively low C/N ratios caused greater abundance of PSB. Increased fish production in PD treatments was clearly due to increased primary productivity and higher zooplankton abundance resulting from nutrient-grazing-detritus-microbial-food chain complex pathways.     

Distribution patterns of protein mineralizing and ammonifying bacterial populations in fish-farming ponds under different management systems

Enumeration of protein mineralizing and ammonifying bacterial populations in water and sediment samples of six fish-farming ponds (polyculture, monoculture and traditional systems) over a period of two and a half years revealed significant differences between the culture systems with maximal and lowest counts in the monoculture and traditional systems respectively. This distribution pattern was related to the degree of organic loading in the system. Both groups of bacteria were most numerous during winter but were greatly reduced in number during the summer. The factors responsible for their spatial and seasonal distributions are discussed.     

Assessing East African trade in seahorse species as a basis for conservation under international controls

• 1. Seahorses (Hippocampus spp.), many of which are listed as Vulnerable or Endangered on the IUCN Red List, are traded worldwide as souvenirs, aquarium fish and, primarily, for use in traditional medicines. Given concern over the sustainability of this trade, the genus was added to Appendix II of the Convention on International Trade in Endangered Species of Wild Fauna and Flora (CITES) in May 2004.
• 2. This paper reports findings of the first ever survey of seahorse trade in Africa, conducted in Kenya and Tanzania in May and June 2000.
• 3. Seahorse trade in Kenya was found to be negligible, with approximately 10 live seahorses exported as aquarium fish annually. Until 1998, however, Kenya may have imported somewhere from 1 to 2.3 t of dried seahorses annually from Tanzania for re‐export to Asian medicine markets. Seahorse trade in Tanzania remained substantial, with at least 630–930 kg of dried seahorse exported directly to Asia each year.
• 4. Accounts of declines in seahorse availability and seahorse size, although few in number, could be early warning signs that wild populations are suffering, at least locally. Close monitoring of future developments in the trade will be essential to allow for timely conservation action as and when necessary, and would contribute to our understanding of the ecological and economical implications of small‐scale, non‐food fisheries.

Copyright © 2004 John Wiley & Sons, Ltd.