Factors controlling potentially mineralizable and recalcitrant soil organic matter in humid Asia

To understand the dynamics of soil organic matter in humid regions in Asia, several soil and meteorological properties were tested to estimate the amounts of potentially mineralizable organic carbon (PMC) and nitrogen (PMN) as well as recalcitrant organic carbon (ROC) and nitrogen (RON). Eighty-nine surface soil samples were collected in Thailand, Indonesia and Japan from cropland and forest ecosystems. The fresh soils were incubated for 133 days under constant temperature and moisture conditions, and CO₂ emissions and mineral N from the soils were monitored. The PMC and PMN were determined by fitting models to the cumulative curves of the CO₂ and mineral N. The ROC and RON were determined by subtracting PMC and PMN from total C and total N, respectively. The soil properties tested included soil pH, sand, silt and clay contents, amounts of the acid oxalate soluble Si, Al and Fe, carbon and nitrogen contents of the light fraction ([LF] < 1.6 g cm⁻³) and heavy fraction (HF), and the C/N ratio of the LF and HF. The meteorological properties considered were mean annual temperature and precipitation. Using multiple regression analysis and a stepwise method, PMC and PMN was well estimated by the carbon and nitrogen content of LF (LFC and LFN) and the clay content. This suggests the partially labile nature of clay-associating organic matter as well as LFC and LFN. The PMC and PMN were well estimated by LFC and LFN in forest soils and clay contents in cropland soils. Major factors controlling ROC and RON were light fraction-organic matter, amorphous materials and clay content, suggesting the importance of parent materials in estimating the amount of recalcitrant organic matter in humid Asia.     

Effects of sampling errors on abundance estimates from virtual population analysis for walleye pollock in northern waters of Sea of Japan

ABSTRACT:   Effects of sampling errors on abundance estimates from virtual population analysis (VPA) were quantified with the bootstrap method for stock of walleye pollock in the the Sea of Japan. In the bootstrap method, individual fish measurements were resampled. A total of 1000 bootstrap samples were produced for each year from 1991 to 2001. The coefficients of variation (CV) of catch at age in 2001 ranged 6.1–33.1%. The CV of an abundance estimate in 2001 ranged 9.0–35.7%. Abundance estimates of the oldest age and the latest year, which had larger CVs than the other estimates, were sensitive to sampling errors. Effects of sampling errors became smaller when the catch at age had been accumulated over a few years. Although VPA includes various types of errors, only the sampling errors have room for improvement in reality. Quantifying the effect of sampling error on VPA estimates is essential for sound and efficient stock management, and is emphasized in this study.     

土槿皮乙酸B增加活性氧水平诱导人乳腺癌MCF-7细胞凋亡和衰老的研究

本研究旨在研究土槿皮乙酸B(PAB)诱导人乳腺癌MCF-7细胞凋亡和衰老与活性氧的关系。在相差显微镜下观察4 μmol/L PAB在36 h诱导细胞凋亡小体的出现;LDH方法显示PAB时间依赖性的增加凋亡比率;SA-β-半乳糖苷酶显示4 μmol/L PAB作用3 d后,去药再作用5 d,96%的细胞蓝染,细胞变大且扁平;流式细胞仪检测用DCFH-DA染色后4 μmol/L PAB 时间依赖性增加细胞内活性氧水平。所以4 μmol/L PAB通过增加细胞内活性氧水平促进细胞凋亡和衰老。     

Clone identification in Japanese flowering cherry (Prunus subgenus Cerasus) cultivars using nuclear SSR markers

Numerous cultivars of Japanese flowering cherry (Prunus subgenus Cerasus) are recognized, but in many cases they are difficult to distinguish morphologically. Therefore, we evaluated the clonal status of 215 designated cultivars using 17 SSR markers. More than half the cultivars were morphologically distinct and had unique genotypes. However, 22 cultivars were found to consist of multiple clones, which probably originate from the chance seedlings, suggesting that their unique characteristics have not been maintained through propagation by grafting alone. We also identified 23 groups consisting of two or more cultivars with identical genotypes. Most members of these groups were putatively synonymously related and morphologically identical. However, some of them were probably derived from bud sport mutants and had distinct morphologies. SSR marker analysis provided useful insights into the clonal status of the examined Japanese flowering cherry cultivars and proved to be a useful tool for cultivar characterization.     

The first detection of okadaic acid and its derivatives in Korean bivalves by liquid chromatography-mass spectrometry

ABSTRACT:   Lipophilic toxin profiles associated with diarrhetic shellfish poisoning in Korean bivalves were investigated by liquid chromatography-mass spectrometry (LC-MS). Okadaic acid (OA), dinophysistoxins (DTX), pectenotoxins (PTX) and yessotoxin (YTX) in bivalves were quantified by LC-MS. Thirty-eight bivalve samples were collected from five different areas on the south coast of Korea during January to June 2006. Dinophysistoxin-1 (DTX1) and OA were found in some samples of both mussel Mytilus edulis and oyster Crassostrea gigas . The levels of DTX1 and OA found in the hepatopancreas of the samples were 0.04–0.23 µg/g and 0.03–0.08 µg/g, respectively. Dinophysistoxin-3 was found in the hepatopancreas of the short-necked clam Ruditapes philippinarum at a concentration of 0.06 µg/g. PTX and YTX were not detected from all of the samples examined. This is the first report of the unambiguous identification of OA and its derivatives, by LC-MS, in Korean bivalves.     

Reaction-diffusion model as a framework for understanding biological pattern formation

The Turing, or reaction-diffusion (RD), model is one of the best-known theoretical models used to explain self-regulated pattern formation in the developing animal embryo. Although its real-world relevance was long debated, a number of compelling examples have gradually alleviated much of the skepticism surrounding the model. The RD model can generate a wide variety of spatial patterns, and mathematical studies have revealed the kinds of interactions required for each, giving this model the potential for application as an experimental working hypothesis in a wide variety of morphological phenomena. In this review, we describe the essence of this theory for experimental biologists unfamiliar with the model, using examples from experimental studies in which the RD model is effectively incorporated.     

Selective accumulation of Trichoderma species in soils suppressive to radish damping-off disease after repeated inoculations with Rhizoctonia solani, binucleate Rhizoctonia and Sclerotium rolfsii

Artificial suppression of radish damping-off disease was induced by repeated soil inoculations with Rhizoctonia solani, binucleate Rhizoctonia (BNR) and Sclerotium rolfsii in pot systems. Soils repeatedly inoculated with R. solani and BNR showed suppressive to disease caused by R. solani and S. rolfsii, while soils repeatedly inoculated with S. rolfsii were suppressive to disease caused by S. rolfsii but not by R. solani. Species of Trichoderma were consistently isolated from soils repeatedly inoculated with R. solani, BNR and S. rolfsii. These Trichoderma spp. accumulated selectively in relation to the fungal species that was repeatedly added to the soils. The ratios of the frequencies of T. viride, T. harzianum and T. hamatum were 5:2:2 and 8:5:2 in soils repeatedly inoculated with R. solani and BNR, respectively. In S. rolfsii- inoculated soils, T. koningii was predominantly isolated. T. viride, T. harzianum and T. hamatum isolates obtained from either R. solani or BNR after repeated additions to the soils suppressed radish damping-off disease caused after challenge inoculations with R. solani or S. rolfsii. Among the Trichoderma species, T. viride consistently yielded high levels of suppression. However, isolates of T. koningii obtained from S. rolfsii-infested soils suppressed disease caused by S. rolfsii but failed to suppress disease caused by R. solani. Generally, the species of Trichoderma accumulated in a selective pattern that was closely related to the species of fungal pathogen used to induce the suppressive soil.     

Distribution and development of sclerotium grains as influenced by aluminum status in volcanic ash soils

Granulometric and clay mineralogical analyses were performed on soil types differing in their genesis which had been formed on the raised coral limestone terraces and plateaux under the perhumid subtropical maritime climate of the Ryukyu Islands. The amount of clay fraction in Rendzina-like soil on the lower terrace was relatively small (8-34%) and decreased with depth, while those in Terra fusca-like soils on the middle terraces and in Terra rossa-like soil on the plateau were very large (45–78%) suggesting the occurrence of clay migration.

Rendzina-like soil mainly contained illite and metahalloysite with a moderate amount of mixed layered mineral consisting of illite and vermiculite, and a small amount of vermiculite, Al-vermiculite, goethite, and quartz. Clay mineral composition of Terra fusca-like and Mottled Terra fusca-like soils was similar to that of Rendzina-like soil except that the content of illite was lower in these soils. Terra rossa-like soil, on the other hand, mainly contained Al-vermiculite, metahalloysite, and gibbsite, indicating a highly advanced stage of hydroxyaluminium interlayering. Differences in clay mineral composition from that of Rendzina, Terra fusca, and Terra rossa soils in the European countries were recognized, in that mont-morillonite was absent and hydroxyaluminium interlayering actively proceeded in the soils studied here. This finding is considered to reflect the rapid alteration and intense hydroxyaluminium interlayering of clay minerals under the perhumid subtropical conditions.     

Cytoskeletal and mitochondrial properties of bovine oocytes obtained by Ovum Pick‐Up: the effects of follicle stimulation and in vitro maturation

Follicle stimulation by follicular stimulating hormone (FSH) is known to improve developmental competence of bovine oocytes obtained by Ovum Pick‐Up (OPU); however, the exact factors in oocytes affected by this treatment have remained unclear. We compared in vitro matured (IVM) oocytes obtained at the immature stage from cows by OPU either without or with stimulation with FSH (non‐stimulated and stimulated OPU, respectively) to those obtained by superstimulation and in vivo maturation in terms of cytoskeleton morphology, mitochondrial distribution, intracellular adenosine triphosphate (ATP) content and H₂O₂ levels at the metaphase‐II stage and intracellular Ca²⁺ levels after in vitro fertilization (IVF). Confocal microscopy after immunostaining revealed reduced size of the meiotic spindle, associated with increased tendencies of microfilament degradation and insufficient mitochondrial re‐distribution in non‐stimulated OPU‐derived IVM oocytes compared with those collected by stimulated OPU, which in turn resembled in vivo matured oocytes. However, there was no difference in mitochondrial functions between oocytes obtained by stimulated or non‐stimulated OPU in terms of ATP content, cytoplasmic H₂O₂ levels, base Ca²⁺ levels and the frequencies and amplitudes of Ca²⁺ oscillations after IVF. Larger size of metaphase spindles in oocytes obtained by stimulated OPU may reflect and potentially contribute to their high developmental competence.