Optimizing fertilizers doses and their effects on photosynthesis and biomass yield of Hibiscus cannabinus cultivated on BRIS soil

In tropical climate, huge amount of fertilizer need to be used for the cultivation of kenaf (Hibiscus cannabinus L.) in Beach Ridges Interspersed with Swales (BRIS) soil, however this approach is not cost effective and environmental friendly. Therefore, the optimizing of fertilizer rate for BRIS soils and selection of suitable soil amendments are crucial to get a higher yield. In this study, the effects of different combinations of urea, chicken manure and biochar on soil properties, growth performance and physiological characteristics of kenaf cultivated on the BRIS soil were investigated. Eight treatments were conducted namely: control (T1), biochar (T2), chicken manure (T3), urea (T4), chicken manure + urea (T5), biochar + chicken manure (T6), urea + biochar (T7) and biochar + chicken manure + urea (T8). The biomass and physiological characteristics of kenaf were recorded every month, while the soil was analyzed following a standard laboratory procedure. The application of organic and inorganic fertilizer (urea) significantly increased the nutrient content of the soil compared to the T1, whereas T3 showed the highest pH, cation exchange capacity, and exchangeable bases (Na, Mg, Ca). However, the mixing of biochar with organic and inorganic fertilizers showed the highest plant height, diameter of stem and number of leaves as well as dry biomass compared to other treatments. Furthermore, the application of nitrogen fertilizer significantly increased the photosynthesis rate and stomatal conductivity. The results suggest that the mixing of biochar with organic and inorganic fertilizers represents an effective approach for the cultivation of kenaf in tropical climate.     

MytiLec,a Mussel R-Type Lectin,Interacts with Surface Glycan Gb3 on Burkitt’s Lymphoma Cells to Trigger Apoptosis through Multiple Pathways

MytiLec; a novel lectin isolated from the Mediterranean mussel (Mytilus galloprovincialis); shows strong binding affinity to globotriose (Gb3: Galα1-4Galβ1-4Glc). MytiLec revealed β-trefoil folding as also found in the ricin B-subunit type (R-type) lectin family, although the amino acid sequences were quite different. Classification of R-type lectin family members therefore needs to be based on conformation as well as on primary structure. MytiLec specifically killed Burkitt''s lymphoma Ramos cells, which express Gb3. Fluorescein-labeling assay revealed that MytiLec was incorporated inside the cells. MytiLec treatment of Ramos cells resulted in activation of both classical MAPK/ extracellular signal-regulated kinase and extracellular signal-regulated kinase (MEK-ERK) and stress-activated (p38 kinase and JNK) Mitogen-activated protein kinases (MAPK) pathways. In the cells, MytiLec treatment triggered expression of tumor necrosis factor (TNF)-α (a ligand of death receptor-dependent apoptosis) and activation of mitochondria-controlling caspase-9 (initiator caspase) and caspase-3 (activator caspase). Experiments using the specific MEK inhibitor U0126 showed that MytiLec-induced phosphorylation of the MEK-ERK pathway up-regulated expression of the cyclin-dependent kinase inhibitor p21, leading to cell cycle arrest and TNF-α production. Activation of caspase-3 by MytiLec appeared to be regulated by multiple different pathways. Our findings, taken together, indicate that the novel R-type lectin MytiLec initiates programmed cell death of Burkitt’s lymphoma cells through multiple pathways (MAPK cascade, death receptor signaling; caspase activation) based on interaction of the lectin with Gb3-containing glycosphingolipid-enriched microdomains on the cell surface.     

Influence of varying dietary electrolyte balance on broiler performance under tropical summer conditions

A 6‐week feeding trial was conducted to determine the effects of varying dietary electrolyte balance (DEB) on growth performance and physiological responses in broiler chicks reared during hot summer months (26.1–37.5 °C). The average minimum and maximum room temperatures recorded from 14 to 42 days of age were 26.1 and 37.5 °C, respectively, with relative humidity ranging from 51% to 55%. Five DEB treatments supplying 0, 50, 150, 250 and 350 (Na⁺+K⁺–Cl^?) mEq/kg of diet were prepared by adding NaHCO₃ and/or NH₄Cl to basal diet that contained 185 mEq/kg from 1 to 28 days and 172 mEq/kg from 29 to 42 days. These DEB diets were randomly offered to six experimental units of 20 chicks each. Improved 42‐day body weight gain (BWG), feed:gain (F:G) and reduced mortality was noted with DEB 50, 150 and 250 mEq/kg compared to DEB 0 and 350 mEq/kg. A quadratic effect of increasing DEB level was observed on BWG and F:G, whereas the effect was linear for feed intake, water intake and litter moisture. The DEB 50, 150 and 250 maintained better blood pH, pCO₂ and HCO₃ concentrations during acute heat stress periods than that of 0 and 350. The blood heterophil and lymphocyte percent as well as heterophil:lymphocyte were remained unaffected. The lowest DEB (0 mEq/kg) diet reduced the feed intake and promoted metabolic acidosis. At 350 mEq/kg DEB, water intake and metabolic alkalosis were promoted probably due to high levels of dietary NaHCO₃. The study concluded that overall better performance was recorded with DEB 50, 150 and 250 mEq/kg. These results indicated that single optimal DEB value could not be recommended to combat heat stress in broilers.     

Compositions and antimicrobial activities of the essential oils of two Hypericum species from Turkey

The chemical compositions of essential oils obtained from Hypericum hyssopifolium var. microcalycinum and Hypericum lysimachioides var. lysimachioides were analysed by using GC and GC-MS. Caryophyllene oxide was found to be the major component. The essential oils of both Hypericum species showed antimicrobial activity against nine microorganism at a concentration of 60 to 80 microg/ml.     

Molecular markers for the identification of resistance genes and marker-assisted selection in breeding wheat for leaf rust resistance

The resistance genes Lr9, Lr24, Lr25, Lr29, Lr35 and Lr37, which were not previously utilised in Hungary, have been incorporated into four Martonvásár winter wheat cultivars using marker-assisted selection with PCR-based markers. In the course of a backcross programme, the genes were transferred into Martonvásár wheat varieties and various BC generations were produced. Work aimed at pyramiding resistance genes is currently underway in Martonvásár, and plants containing the gene combinations Lr9 + Lr24, Lr9 + Lr25 and Lr9 + Lr29 are now available. From the BC₂F₄ generation of the ‘Mv Emma’*3/’R.L.6010’ combination (‘R.L.6010’ is the donor of the Lr9 gene) 287 lines were tested for leaf rust resistance in an artificially inoculated nursery. A co-dominant primer combination was designed to identify both resistant and susceptible offsprings. The results of resistance tests and molecular marker detection agreed in most cases. Designated leaf rust resistance genes were identified with molecular markers in wheat varieties and breeding lines. The Lr26 and Lr34 resistance genes occur frequently in the Martonvásár gene pool, and the presence of the Lr37 gene has also been detected in a number of Hungarian genotypes.     

Genetic model analysis on seedling and maturity traits in wheat under rainfed conditions

An experiment was conducted to access the genetic variability among early vigour and quantitative traits under limited moisture in F₂ generation of a 5 × 5 diallel cross of bread wheat. The results indicated that there was significant genotypic variation among the genotypes. Additive dominance model revealed full fitness of the data for RL, DSW, FRW, DRW, spike length, and 1000-grain weight but was partially fit for SL, FSW, R/S, tillers per seedling, plant height, tillers per plant, spikelets per spike, and grain yield per plant. The partially adequate models for these plant characters might be due to the presence of non-allelic interaction, linkage, and non-independent distribution of the genes in the parents. Additive genes coupled with moderate to high narrow sense heritability were involved in the heritage of all the traits, which indicated a higher scope of selection in early generations.     

Artificial neural network analysis of lipase-catalyzed synthesis of sugar alcohol ester

Artificial neural network (ANN) analysis of immobilized Candida antarctica lipase B-catalyzed esterification of palmitic acid with xylitol was carried out. Temperature, time, amount of enzyme, amount of molecular sieve, substrate molar ratio and volume of solvent were the six important parameters used as the inputs of the network trained by Levenberg-Marquardt (LM) algorithm. After evaluating different ANN configurations, the best network was found to be consisted of two hidden layers with six and seven neurons in the first and second layers respectively, using a hyperbolic tangent sigmoid transfer function. The coefficient of determination (R²) and mean square error (MSE) values between the actual and predicted responses were 1 and 1.5025e−24 for the training and 0.97239 and 0.03259 for the testing datasets. The results indicate the good generalization performance of the neural network model and its capability to predict the conversion of the substrates.     

Effect of Soil Sample Size on Saturated Soil Hydraulic Conductivity

Saturated hydraulic conductivity (K_sat) is regarded as a key soil physical variable to determine soil infiltration rate, percolation depth and other hydrological processes. The purpose of this study was to determine the best soil sampling’s ring size for measuring K_sat. For this purpose, 25 rings with five different diameters (2, 3, 4, 5 and 6 inch) and with the same depth of 20 cm (five replicates) were hammered in close vicinity to each other into the ground of undisturbed loess deposits of a small farm to measure K_sat and bulk density. Hydraulic conductivity was measured at three constant loads of 22, 27 and 32 cm. The results showed that the ring with the internal diameter of 6 inches had the minimum variation coefficient and maximum K_sat for all the three hydraulic heads. In addition, the bulk density of this ring size was less than the other rings.     

Phytoremediation Potential of Vetiver Grass (<Emphasis Type="Italic">Vetiveria zizanioides</Emphasis>) for Treatment of Metal-Contaminated Water

Phytoremediation using vetiver grass (Vetiveria zizanioides) has been regarded as an effective technique for removing contaminants in polluted water. This study was conducted to assess the removal efficiency of heavy metals (Cu, Fe, Mn, Pb, Zn) using vetiver grass (VG) at different root lengths and densities and to determine metals uptake rate by plant parts (root and shoot) between treatments (low and high concentration). Removal efficiency for heavy metals in water by VG is ranked in the order of Fe>Pb>Cu>Mn>Zn. Results showed that VG was effective in removing all the heavy metals, but removals greatly depend on root length, plant density and metal concentration. Longer root length and higher density showed greater removals of heavy metals due to increased surface area for metal absorption by plant roots. Results also demonstrated significant difference of heavy metals uptake in plant parts at different concentrations indicating that root has high tolerance towards elevated concentration of heavy metals. However, the effects were less significant in plant shoot suggesting that metals uptake were generally higher in root than in shoot. The findings have shown potential of VG in phytoremediation for heavy metals removal in water thus providing significant implication for treatment of metal-contaminated water.     

Screening for bovine leukocyte adhesion deficiency,deficiency of uridine monophosphate synthase,complex vertebral malformation,bovine citrullinaemia,and factor XI deficiency in Holstein cows reared in Turkey

Background

Bovine leukocyte adhesion deficiency (BLAD), deficiency of uridine monophosphate synthase (DUMPS), complex vertebral malformation (CVM), bovine citrullinaemia (BC) and factor XI deficiency (FXID) are autosomal recessive hereditary disorders, which have had significant economic impact on dairy cattle breeding worldwide. In this study, 350 Holstein cows reared in Turkey were screened for BLAD, DUMPS, CVM, BC and FXID genotypes to obtain an indication on the importance of these defects in Turkish Holsteins.

Methods

Genomic DNA was obtained from blood and the amplicons of BLAD, DUMPS, CVM, BC and FXID were obtained by using PCR. PCR products were digested with TaqI, AvaI and AvaII restriction enzymes for BLAD, DUMPS, and BC, respectively. These digested products and PCR product of FXID were analyzed by agarose gel electrophoresis stained with ethidium bromide. CVM genotypes were detected by DNA sequencing. Additionally, all genotypes were confirmed by DNA sequencing to determine whether there was a mutant allele or not.

Results

Fourteen BLAD, twelve CVM and four FXID carriers were found among the 350 Holstein cows examined, while carriers of DUMPS and BC were not detected. The mutant allele frequencies were calculated as 0.02, 0.017, and 0.006 for BLAD, CVM and FXID, respectively with corresponding carrier prevalence of 4.0% (BLAD), 3.4% (CVM) and 1.2% (FXID).

Conclusion

This study demonstrates that carriers of BLAD, CVM and FXID are present in the Turkish Holstein population, although at a low frequency. The actual number of clinical cases is unknown, but sporadic cases may appear. As artificial insemination is widely used in dairy cattle breeding, carriers of BLAD, CVM and FXID are likely present within the population of breeding sires. It is recommended to screen breeding sires for these defective genes in order to avoid an unwanted spread within the population.