Tolerance to excess moisture in maize (Zea mays L.): susceptible crop stages and identification of tolerant genotypes

Excess moisture (water-logging) during the summer–rainy season is one of the major production constraints for maize (Zea mays L.) in a large area of Southeast Asia. Identification and development of genotypes capable of withstanding the stress conditions could be an ideal and affordable approach suitable for resource poor maize-growing farmers of such areas. We attempted to identify the most susceptible/critical crop stage(s) of maize for excess moisture stress, and to develop a screening technique and selection strategies for identification of germplasm tolerant to excess moisture stress. Among the four crop stages, i.e. early seedling (V2), knee-high (V7), tasseling (VT) and milk stage (R1), V2 was found to be highly susceptible, followed by the V7 stage. A screening technique (cup method) was developed/standardized, and was found to be an efficient technique for large-scale screening of maize genotypes against excess soil moisture stress. Germplasm was screened using this technique followed by field evaluation at the V7 growth stage (seventh leaf visible). Excess soil moisture stress severely affected various growth and biochemical parameters, impaired anthesis and silking, and eventually resulted in poor kernel development and yield. However, remarkable variability was found among the genotypes studied. Genotypes with good carbohydrate accumulation in stem tissues, moderate stomatal conductance, <5 days ASI, high root porosity, and early brace root development ability have been found to have good tolerance against the hypoxia/anoxia caused by excess soil moisture conditions.     

Biological control of Macrophomina phaseolina by chemotactic fluorescent Pseudomonas aeruginosa PN1 and its plant growth promotory activity in chir-pine

Ten strains of Pseudomonas aeruginosa (PN1 ˜ PN10) isolated from rhizosphere of chir-pine were tested for their plant growth promontory properties and antagonistic activities against Macrophomina phaseolina in vitro and in vivo. P. aeruginosa PN1 produced siderophore, IAA, cyanogen and solubilized phosphorus, besides producing chitinase and β-1,3-glucanase. In dual culture, P. aeruginosa PN1 caused 69% colony growth inhibition. However, cell free culture filtrate also posed inhibitory effect but to a lesser extent. After 90 days, P. aeruginosa PN1 increased plant growth and biomass in pots trial containing M. phaseolina-infested soil. PN1 showed the strong chemotaxis toward root exudates resulting in effective root colonization. Moreover, increased population in rhizosphere of these bacteria was also recorded after 90 days of treatment. Thus, chemotactic fluorescent P. aeruginosa PN1 exhibited strong antagonistic property against M. phaseolina, suppressed the disease and improved plant growth of the seedlings of chir-pine proving potential biocontrol agent.     

Ovsynch Plus protocol improves ovarian response in anovular Murrah buffaloes in low‐breeding season

The objective of the study was to evaluate the efficacy of ovarian response and pregnancy rate in anovular buffaloes following Ovsynch and Ovsynch Plus protocols. Buffaloes (n = 55) were divided into two groups: Ovsynch group (n = 26): GnRH (10 μg, GnRH1) on Day 0, PGF₂α (25 mg) on Day 7, GnRH (10 μg, GnRH2) on Day 9; Ovsynch Plus group (n = 29): 500 IU equine chorionic gonadotropin (eCG) 72 hr (day ?3) prior to Ovsynch protocol, followed by fixed timed artificial insemination (FTAI) 6 and 24 hr after GnRH2 injection in bot groups. Transrectal ultrasonography was performed daily, that is, from day 0 and ?3 in Ovsynch and Ovsynch Plus group, respectively for ovarian response and pregnancy diagnosis at day 30 post‐insemination. In Ovsynch Plus group, administration of eCG prior to GnRH1 increased (p < .001) the diameter (mm) of dominant follicle (DF) from 10.15 ± 0.26 to 12.23 ± 0.34 within 72 hr of treatment resulting higher ovulatory response to GnRH1. Ovulation after GnRH1 was higher (p < .01) in Ovsynch Plus group (96.6%) than Ovsynch group (61.5%). However, ovulation rate to GnRH2 was similar (p > .05) between groups (Ovsynch group: 76.9% vs. Ovsynch Plus group: 70.0%). Mean DF diameter (mm) that ovulated to both GnRHs was higher (p < .01) than non‐ovulated counterparts in both groups (Ovsynch group: 10.80 ± 0.27 vs. 8.47 ± 0.53; Ovsynch Plus group: 11.99 ± 0.24 vs. 9.5 ± 0.63). Pregnancy was established in buffaloes which responded to both GnRHs, irrespective of groups, being higher (p = .52) in Ovsynch Plus group (34.5%) than Ovsynch group (23.1%), though non‐significant. In summary, this study showed that eCG inclusion prior to Ovsynch regimen improves ovulatory response in anovular buffaloes during low‐breeding season.     

Studies on hymenopteran parasites ofMelanagromyza obtusa (Malloch) (diptera,agromyzidae), a pest ofCajanus cajan spreng., in India

Four hymenopteran species viz.Ormyrus orientalis Walker (Ormyridae),Euderus lividus (Ashmead) (Eulophidae),Eurytoma sp. (Eurytomidae) andSenegalella sp. (Torymidae) were reared and studied as parasites ofMelanagromyza obtusa (Malloch) (Dipt., Agromyzidae) in India. The biology ofM. obtusa and their parasites is briefly described. A view is given on the possibility of using these parasites for biological control.     

Botrytis: a hazard to reforestation

This article contains a review of most of the literature on Botrytis in relation to forests. It discusses analytically various types of damage caused by different species of Botrytis to trees, tree seedlings and seeds; epidemiology of the diseases caused; and possibilities of preventing and controlling the diseases and reducing losses.     

SSR markers linked to kernel weight and tiller number in sorghum identified by association mapping

Sorghum is an energy crop with high biomass production potential and low input requirement. To identify markers linked to grain and biomass production traits, 43 SSR markers were mapped for association with tiller number and kernel weight using the sorghum mini core of 242 landraces. While kernel weight was evaluated in two environments, tiller number was evaluated in four environments. The number of SSR alleles was positively correlated with polymorphism information content for the markers. Association mapping found one marker (4-162) linked to kernel weight and two (40-1896 and 81-108) to tiller numbers. 4-162 and 40-1896 co-localized with previously mapped quantitative trait loci. Localized association mapping around 81-108 identified an amino-cyclopropane-carboxylate (ACC) oxidase gene as a candidate for tiller number. ACC oxidase is an ethylene forming enzyme and increased ethylene level has been shown to increase the number of tillers in the grass family. The results provide the groundwork to identify genes regulating kernel weight and tiller number in sorghum in the future.     

Genomic characterization of drought tolerance-related traits in spring wheat

Drought tolerance was investigated in ‘C306’, one of the most drought tolerant wheat cultivars bred in India in the 1960’s. An intervarietal mapping population of recombinant inbred lines of the cross ‘C306’ × ‘HUW206’ was evaluated for drought tolerance components, namely potential quantum efficiency of photosystem (PS) II (F_v/F_m), chlorophyll content (Chl), flag leaf temperature (Lt), and grain yield per plant (Gyp) under stress. Three independent experiments were conducted under well-watered and water-stressed conditions in greenhouses and growth chambers at Kansas State University (USA). Five hundred and sixty microsatellite markers covering the entire genome were screened for polymorphism between the parents. A QTL (QLt.ksu-1D) for Lt (low flag leaf temperature under stress) on the short arm of chromosome 1D between markers Xbarc271 and Xgwm337 at LOD 3.5 explained 37% of the phenotypic variation. A QTL for F_v/F_m (QF _v /F _m .ksu-3B) and Chl (QChl.ksu-3B) controlling quantum efficiency of PS II and chlorophyll content under stress were co-localized on chromosome 3B in the marker interval Xbarc68–Xbarc101 and explained 35–40% of the phenotypic variation for each trait. A QTL (QGyp.ksu-4A) for Gyp on chromosome 4A at a LOD value of 3.2 explained 16.3% of the phenotypic variation. Inconsistent QTLs were observed for F_v/F_m on chromosomes 3A, 6A, 2B, 4B, and 4D; for Chl on 3A, 6A, 2B and 4B; and for Lt on 1A, 3A 6A, 3B and 5B. The identified QTLs give a first glimpse of the genetics of drought tolerance in C306 and need to be validated in field experiments using the marker-phenotype linkages reported here.     

Molecular characterization and phylogeny of phytoplasma associated with bunchy top disease in its new host Okra (<Emphasis Type="Italic">Abelmoschus esculentus</Emphasis>) in India reveal a novel lineage within the 16SrI group

Okra plants with bunchy top disease were found to be prevalent during the period of August–October 2009 in New Delhi, India. The common symptoms observed were shortening of internodes, aggregation of leaves at the apical region, reduced leaf lamina, stem reddening, fruit bending, phyllody and stunting of plants. The disease incidence ranged from 2–60% accompanied by significant reductions in production of both flowers and seeds. Nested polymerase chain reaction targeting phytoplasma specific 16S rDNA and rp genes revealed all symptomatic plants to be positive for phytoplasma. Homology searches depicted its closest identity to phytoplasmas of 16SrI ‘Candidatus Phytoplasma asteris’, like the Sugarcane yellows and Periwinkle phyllody phytoplasmas. Profiles for 16S rDNA obtained with 10 restriction endonucleases, differed in TaqI sites for two phytoplasma isolates (BHND5 & 10) from the standard pattern of 16SrI-B subgroup, the latter was seen in the case of isolate BHND1. Restriction fragment analysis of rp genes with AluI, Tsp509I matched with patterns of the rpI-B phytoplasmas. Phylogenetic reconstruction of rp genes revealed okra bunchy top phytoplasma (BHND1) as a divergent isolate, the subsequent sequence analysis of which showed the presence of a novel BslI site. These significant differences suggest that multiple phytoplasma strains are affecting okra, one of which is a diverging lineage within the 16SrI-B group while others represent a new 16SrI subgroup not reported so far. Additionally, this is the first report of a phytoplasma associated disease in okra plants worldwide.     

Mining of rice blast resistance gene Pi54 shows effect of single nucleotide polymorphisms on phenotypic expression of the alleles

The rice blast resistance gene Pi54 (formerly Pi-k ^h ) isolated from indica rice line Tetep confers broad spectrum resistance to different strains of Magnaporthe oryzae in India. In this study, we performed PCR based allele mining for blast resistance gene Pi54 from six cultivated rice lines and eight wild rice species to understand its structural variation and its impact on the phenotypes. Sequence analysis indicates presence of more variation between cultivated and wild species (35–90 %) than variation found among cultivated species (1–20 %). Structural analysis of alleles showed presence of variable number of Open Reading Frames (0–2) principally having point mutations in the leucine rich repeats (LRR) regions. The Ka/Ks ratio of LRR region was >1, which shows the effect of selection pressure at this domain. The Pi54 alleles have 142 polymorphic sites with average nucleotide diversity of 0.04522. The K_a/K_s ratio of coding region ranged from 0 to >1 and Tajima’s D test showed negative as well as Darwinian selection within the alleles, which corresponded well with their phenotypic reaction to M. oryzae. The results obtained in this study shows divergent nature of Pi54 allele in wild species and land races of rice. The resistance alleles identified in this study can be used in effective management of rice blast disease through gene pyramiding.