Photonic crystal light collectors in fish retina improve vision in turbid water

Despite their diversity, vertebrate retinae are specialized to maximize either photon catch or visual acuity. Here, we describe a functional type that is optimized for neither purpose. In the retina of the elephantnose fish (Gnathonemus petersii), cone photoreceptors are grouped together within reflecting, photonic crystal-lined cups acting as macroreceptors, but rod photoreceptors are positioned behind these reflectors. This unusual arrangement matches rod and cone sensitivity for detecting color-mixed stimuli, whereas the photoreceptor grouping renders the fish insensitive to spatial noise; together, this enables more reliable flight reactions in the fish's dim and turbid habitat as compared with fish lacking this retinal specialization.     

Genetic data from avian influenza and avian paramyxoviruses generated by the European network of excellence (EPIZONE) between 2006 and 2011--review and recommendations for surveillance

Since 2006, the members of the molecular epidemiological working group of the European "EPIZONE" network of excellence have been generating sequence data on avian influenza and avian paramyxoviruses from both European and African sources in an attempt to more fully understand the circulation and impact of these viruses. This review presents a timely update on the epidemiological situation of these viruses based on sequence data generated during the lifetime of this project in addition to data produced by other groups during the same period. Based on this information and putting it all into a European context, recommendations for continued surveillance of these important viruses within Europe are presented.     

Laboratory diagnosis of avian influenza by reverse transcription (RT)-PCR

RT-PCR assays which amplify conserved regions of the influenza A virus gene are useful tools for the rapid and specific detection of infections of poultry with avian influenza virus (AIV) and for the investigation of large numbers of samples, e.g. within the framework of surveillance programs. Here, we present findings on the efficiency and on the limits of an RT-PCR assay which amplifies a part of the matrix protein gene. Sensitivity and specificity of the method were increased by the additional use of nested PCR. Parameters which may have an essential influence on the detection limit are outlined and discussed. A major focus of the study is the detection of AIV RNA from organ samples and swabs.     

Analysing land-cover changes in relation to environmental variables in Hesse,Germany

Land-use and land-cover changes affect ecological landscape functions and processes. Hence, landscape ecologists have a central interest in a comprehensive understanding of such changes. Our study focuses on the relationships between environmental conditions and agricultural land-cover changes. We present a method to (i) characterise the major spatial-temporal processes of land-cover changes, (ii) identify the correlations between environmental attributes and land-cover changes and (iii) derive potential environmental drivers of land-cover changes in a German marginal rural landscape. The method was applied to study land-cover dynamics from 1945 to 1998 in the districts of Erda, Steinbrücken and Eibelshausen, situated in the marginal rural landscape of the Lahn-Dill Highlands, Germany. We employed land-cover data gained by the interpretation of multi-temporal aerial photographs. Various environmental variables were introduced into the analyses. We identified physical landscape attributes (elevation, slope, aspect, available water capacity and soil texture) and structural landscape dimensions (patch size, patch shape and distance between patch and nearest settlement). With the aid of GIS, K-means partitioning and canonical correspondence analysis, we investigated land-cover trajectory types, land-cover transitions at individual time intervals and their relationships to these environmental variables. Our results show that, between 1945 and 1998, land-cover changes correlated with the physical attributes of the underlying landscape. On the other hand, the structural landscape dimensions correlated with land cover only in periods of minor land-cover changes (1972–98). Greater diversity of physical landscape attributes is correlated with greater land-cover dynamics. Besides the important influence of socio-economic factors, land-cover changes in the study areas took place within the relatively stable physical constraints of the underlying landscape.This revised version was published online in May 2005 with corrections to the Cover Date.     

Fluid resuscitation and the trauma patient.

Traumatic shock can result from one or more of the following: hypovolemia, increased capillary permeability and vasodilatation, impaired myocardial contractility or dysfunction, blood loss, and cardiovascular obstruction. Animals with traumatic injuries are less tolerant of sudden increases in hydrostatic pressure, which can exacerbate fluid leakage into damaged tissues and disrupt blood clots. Pain amplifies the shock response, and analgesic therapy is always recommended in the trauma patient. Therapy must be individualized and monitored closely.     

Transendoscopic injection of poly-L-lactic acid into the soft palate in horses: A new therapy for dorsal displacement of the soft palate?

The purpose of this study was to establish a minimal invasive, transendoscopic technique for injection of poly-L-lactic acid into the free edge of the soft palate that can be performed on the standing sedated horse. Furthermore, whether the implant material induces an increase in fibrous tissue at the injection site, resulting in a greater rigidity of the soft palate, was determined.In 4 horses, the injection was performed bilaterally along the caudal margin of the soft palate, and the influence of the treatment on the soft palate function was determined. Clinical, radiographic and endoscopic examinations at rest were performed before and up to 168 days after injection according to a standardized examination protocol.In 6 horses, the implant material was injected unilaterally into the right half of the caudal margin of the soft palate. After clinical and endoscopic follow-up examinations, 2 horses each were killed 28, 84, and 168 days after the implantation procedure. At necropsy, macroscopic comparison of the treated and the untreated halves of the soft palate showed the influence on the size of the ostium intrapharyngeum and on the soft palate thickness. The localization of the implant material in the soft palate and the tissue response to the poly-L-lactic acid were evaluated histologically.Transendoscopic injection into the soft palate requires neither general anesthesia nor wound management, and it is noted for minimal tissue trauma. After injection, no alteration of the soft palate function was observed in horses with normal upper airway mechanics. One horse with intermittent dorsal displacement of the soft palate showed an improvement of the soft palate function for 112 days after implantation. No significant alteration in the size of the ostium intrapharyngeum was evident in any horse. Histologic assessment indicated the presence of implant material during the entire observation period of 168 days. The implant was accompanied by a granulomatous inflammation, and it was encapsulated by fibrous tissue. This may result in an increase in stiffness, and subsequent a greater rigidity of the soft palate, preventing it from displacement. The injection may therefore be considered an alternative to established therapies in horses showing dorsal displacement of the soft palate because of its unstable free edge.     

Newly developed primers for the detection of Mycobacterium avium subspecies paratuberculosis

Recent publications reported the existence of IS900 like sequences in mycobacteria different from Mycobacterium avium subspecies paratuberculosis (Map). The primers used for IS900 detection of Map have amplified these sequences causing false positive results. In this study, we have developed two new PCR assays for the detection of Map. The first assay is based on the IS900 sequence using primers different from the ones previously reported, the second assay on the f57 sequence. The specificity of the tests was checked by analysis of 190 mycobacterial isolates (74 Map and 116 non-Map isolates). All Map strains were positive and all non-Map strains were negative. Serial dilutions of Map bacteria were used to assess the sensitivity of the assays. We achieved a sensitivity of 1 CFU per PCR for both assays. In addition, a PCR-simulating computer programme was used to evaluate the specificity of the new IS900 primers.

The combination of the two PCR assays has proven to be useful for the identification of Map but validation on a large range of clinical samples still needs to be done.     

Emerging and re-emerging viruses of the honey bee (Apis mellifera L.)

Until the late 1980s, specific viral infections of the honey bee were generally considered harmless in all countries. Then, with the worldwide introduction of the ectoparasite mite Varroa destructor, beekeepers encountered increasing difficulties in maintaining their colonies. Epidemiological surveys and laboratory experiments have demonstrated that the newly acquired virulence of several viruses belonging to the family Dicistroviridae (acute bee paralysis virus, Kashmir bee virus and Israeli acute paralysis virus) in Europe and the USA had been observed in relation with V. destructor acting as a disseminator of these viruses between and within bee colonies and as an activator of virus multiplication in the infected individuals: bee larvae and adults. Equal emphasis is given to deformed wing virus (DWV) belonging to the Iflaviridae. Overt outbreaks of DWV infections have been shown to be linked to the ability of V. destructor to act not only as a mechanical vector of DWV but also as a biological vector. Its replication in mites prior to its vectoring into pupae seemed to be necessary and sufficient for the induction of a overt infection in pupae developing in non-viable bees with deformed wings. DWV in V. destructor infested colonies is now considered as one of the key players of the final collapse. Various approaches for combating bee viral diseases are described: they include selection of tolerant bees, RNA interference and prevention of new pathogen introduction. None of these approaches are expected to lead to enhanced bee-health in the short term.     

Impact of sourdough on buckwheat flour, batter and bread: Biochemical, rheological and textural insights

In this study, the impact of sourdough fermentation on the biochemical, rheological and bread-making performances of buckwheat flour was investigated. In order to assess the effects of the solely acidification, a chemically acidified batter with the same pH of the sourdough was prepared. Extensive hydrolysis of the globulin fraction and release of small polypeptides occurred upon fermentation. A major reduction in the extent of interactions was observed in the sourdough, mainly due to the modification of the major structural components of buckwheat during the fermentation. The hydrolysis of proteins and, possibly, starch was in turn responsible for the major decrease in elasticity observed in the sourdough. In the batters destined for bread-making, the presence of acids was the major cause for reduced elasticity and increased strength, which could be related to the enhanced water-holding capacity of the proteins and/or protein/starch complexes. The addition of sourdough induced dramatic inhibition of the CO₂ production by the baker’s yeasts during proofing, resulting in lower volume and harder crumb of the sourdough bread. On the other hand, the solely acidification induced hardening of the starch gel upon cooking, which was responsible for lower volume and irregular crumb grain in buckwheat bread.