Plasticity of animal genome architecture unmasked by rapid evolution of a pelagic tunicate

Genomes of animals as different as sponges and humans show conservation of global architecture. Here we show that multiple genomic features including transposon diversity, developmental gene repertoire, physical gene order, and intron-exon organization are shattered in the tunicate Oikopleura, belonging to the sister group of vertebrates and retaining chordate morphology. Ancestral architecture of animal genomes can be deeply modified and may therefore be largely nonadaptive. This rapidly evolving animal lineage thus offers unique perspectives on the level of genome plasticity. It also illuminates issues as fundamental as the mechanisms of intron gain.     

Cyt1Aa protein from Bacillus thuringiensis (Berliner) serovar israelensis is active against the Mediterranean fruit fly,Ceratitis capitata (Wiedemann)

BACKGROUND: Ceratitis capitata (Wiedemann) is one of the world's most destructive fruit pests. The aim of this study was to ascertain insecticidal activity of Bacillus thuringiensis (Berliner) δ‐endotoxins to C. capitata. RESULTS: Among 42 selected Bacillus strains, only B. thuringiensis serovar israelensis (Bti) solubilised protoxins showed biological activity against C. capitata neonate larvae, whereas Bti spore and crystal mixture was inactive. Insecticidal activity of Bti protoxins was significantly enhanced by incubation with Culex pipiens L. gut extracts. Overdigestion of Bti protoxins with Sesamia nonagrioides (Lefebvre) gut extracts suppressed biological activity against C. capitata, and this correlated with degradation of Cyt toxins. Cyt1Aa solubilised protoxin showed the highest toxicity, LC₅₀ after 7 days of 4.93 µg cm^?2, while proteolytical processing of Cyt1Aa protoxins by larval gut extracts did not enhance insecticidal activity. CONCLUSION: The present study provides evidence for the first time of the insecticidal activity of a B. thuringiensis strain against C. capitata and identifies a single δ‐endotoxin with potential for controlling this pest. Copyright © 2010 Society of Chemical Industry     

Environmental and anthropogenic risk factors for highly pathogenic avian influenza subtype H5N1 outbreaks in Romania, 2005−2006

The association between highly pathogenic avian influenza (HPAI) subtype H5N1 outbreak risk in poultry in 161 Romanian villages (October 2005 to June 2006) and environmental and anthropogenic factors was investigated. Village outbreak risk was associated with a village being <5 km from a major road (odds ratio [OR] 5.27, 95% confidence interval [CI] 1.21–22.9) or a river/stream (OR 1.97, 95% CI 1.06–3.72). Outbreak risk in the first part of the epidemic was associated with a village being <5 km from a major road (OR 3.31, 95% CI 1.10–9.98) or a regularly flooded land area (OR 5.08, 95% CI 1.08–23.9); whereas outbreak risk in the second part of the epidemic was associated with a village being <5 km from a river/stream (OR 5.5, 95% CI 1.69–18.9). Results suggest that both environmental and anthropogenic factors influence the risk of HPAI subtype H5N1 outbreaks in village poultry populations.     

Feline large granular lymphocyte lymphoma: An Italian Society of Veterinary Oncology (SIONCOV) retrospective study

Feline large granular lymphocyte (LGL) lymphoma is an uncommon subtype of lymphoma characterized by a grave prognosis and scarce response to chemotherapy. There are limited reports on clinico‐pathological and prognostic factors. One‐hundred and 9 cats with newly diagnosed LGL lymphoma that underwent initial staging (including hematology, serum biochemistry, thoracic radiographs and abdominal ultrasound), and followed‐up were retrospectively evaluated. LGL lymphoma was localized within the gastrointestinal tract with or without extra‐intestinal involvement in 91.7% of the cases, and at extra‐gastrointestinal sites in 8.3%. Symptoms were frequent. Anemia (31.2%) and neutrophilia (26.6%) were commonly observed, and 14 (12.8%) cats had neoplastic circulating cells. Frequent biochemistry abnormalities included elevated ALT (39.4%) and hypoalbuminemia (28.4%). Twenty (54.1%) of 37 cats had elevated serum LDH. Treatment varied among cats, and included surgery (11%), chemotherapy (23%), corticosteroids (38.5%) and no treatment (27.5%). Median time to progression (MTTP) was 5 days, and median survival time (MST) 21 days. MST was significantly shorter in the case of substage b, circulating neoplastic cells, lack of chemotherapy administration, and lack of treatment response. A small subset of cats (7.3%) survived more than 6 months, suggesting that a more favorable clinical course can be found among LGL lymphoma patients.     

Soilless systems as an alternative to wild strawberry (Fragaria vesca L.) traditional open-field cultivation in marginal lands of the Tuscan Apennines to enhance crop yield and producers’ income

Yield and quality of wild strawberry (Fragaria vesca L.) cultivars ‘Regina delle Valli’ and ‘Alpine’ cultivated in soil, as the traditional production system, and in soilless (both in open air and protected environments), as an innovative and sustainable production system, were investigated in a marginal and inner area of the Pistoiese Apennine Mountains during two production seasons. An earlier marketable production was obtained in soilless culture, but total marketable yield was higher from plants grown in a traditional open-field environment. Fruits obtained from the protected soilless system were larger, but developed some mildew, had some visual defects, and revealed a reduced skin chroma index, flesh firmness, and total soluble solids content compared to fruits harvested from plants grown under direct sunlight, while no significant differences were observed in total titratable acidity and pH between growing systems. ‘Alpine’ was more suited to soilless protected cultivation, with a much higher yield compared to ‘Regina delle Valli’. Physicochemical properties of berries were not affected by the cultivar, but fruit quality changed with plant age and seasonal crop cycle. ‘Alpine’ fruits gained a greater sensorial preference, both in traditional soil and soilless culture.     

Root System Distribution of Highbush Blueberry Crops of Various Ages in Medium-Textured Soils

The paper deals with the spatial distribution of root density in highbush blueberry plantations of various ages for a proper planting distance recommendation and a better irrigation and fertilization management. The environmental conditions consist of sandy-loamy soils and a continental temperate climate. Two highbush blueberry cultivars were studied, ‘Bluecrop’ and ‘Blueray’. Root density (RD) and density of root cross-sectional area (RCSA) were investigated for various root diameters. It was found that the prevalent type of roots in highbush blueberry crops is the hair type, with root diameters less than 0.1?mm. Both RD and RCSA decreased with distance from plant and with soil depth; the 38-year-old crop showed a more developed root system versus the 8?year-old crop. In both cases the roots did not grow more than 0.6?m laterally and more than 0.7?m deep. According to these results, the planting distances in highbush blueberry could be reduced to substantially increase the number of plants/ha and fruit yield. Irrigation application should be carried out to wet a proper soil volume, about 0.6–0.7?m deep for older crops, and about 0.5?m deep for younger crops.     

Impact of land-use change on biodiversity and ecosystem services in the Chilean temperate forests

Context

Land-use change impacts biodiversity and ecosystem services, which are intrinsically related. There is a serious lack of knowledge concerning on how land-use change affects this relationship at landscape level, where the greatest impacts have been reported. A proper knowledge of that relationship would provide crucial information for planning conservation strategies. The forest landscape of southern Chile, which includes Valdivian Temperate Forest, has been designated as a hotspot for biodiversity conservation. However, this landscape has been transformed by land-use change.

Objective

We evaluated the impact of land-use change on the spatial patterns of the diversity of native forest habitat and the influence of these impacts on the provision of the ecosystem services water supply, erosion control, and organic matter accumulation from 1986 to 2011.

Methods

The evaluation, at the landscape level, was carried out using satellite images, landscape metrics, spatially explicit models and generalized linear models. Results: We found that the area loss of native forest habitat was 12%, the number patches of native forest habitat increased more than 150% and the Shannon diversity index decreased by 0.20. The largest decrease in the provision of services was recorded for erosion control (346%), and the smallest for water supply (11%).

Conclusions

The loss of provision of the ecosystem services can be explained by the interaction between the area loss, increase in the number patches and diversity loss. We recommend that the conservation planning strategies should consider the current landscape configuration, complemented with land-use planning.