Hybridization between Haliotis rufescens and Haliotis discus hannai: evaluation of fertilization,larval development,growth and thermal tolerance

Two introduced abalone species are currently produced in Chile, red abalone Haliotis rufescens and Japanese abalone Haliotis discus hannai. However, red abalone accounts for 99% of total production, while the Japanese abalone has not adapted well to Chilean coastal waters. This study reports the hatching, growth and thermal tolerance performance in interspecific hybrids produced between red (R) and Japanese (J) abalone. Our results show that egg age and sperm concentration were critical factors to produce hybrids. The cross R♀ × J♂ showed a fertilization rate of 55.3 ± 3.5% using 20‐min‐old eggs and sperm concentrations of 14 × 10⁶ cells mL^?1, while the reciprocal cross (J♀ × R♂) was not successful. Further, larval development stages were similar in RR, JJ and RJ hybrid abalones. Among the experimental trials, settlement rate varied from 12.3% to 18.6% and final survival from 20.1% to 31.7%, being the RJ hybrid rates intermediate between parental species. The final shell lengths were similar between RR and RJ hybrids, but significantly higher in JJ abalones. In addition, thermal tolerance was ascertained due its pivotal role for the abalone physiology. Thus, RJ hybrids showed the highest HSP70 gene expression and offers new possibilities to expand Chilean abalone production in warm waters zones.     

Parentage assignment in hybrid abalones (Haliotis rufescens × Haliotis discus hannai) based on microsatellite DNA markers

Parentage analysis in aquaculture determines genealogical relationships between broodstock and progeny when the parents are unknown. Thus, parentage analysis is a useful tool to establish pedigree reports in molecular‐assisted selection programs. Here, we evaluated 10 heterologous microsatellite markers for parentage assignment in abalone hybrids produced from 43 abalone broodstocks of red abalone (Haliotis rufescens) and Japanese abalone (H. discus hannai). The allele frequencies, exclusion probabilities and broodstock contributions were calculated using CERVUS, PAPA and GERUD software. The polymorphic information content (PIC) values showed that most of the microsatellite loci were highly informative (>0.7) and more than 90% of parentage assignment was possible with a minimum of 5–6 microsatellite markers. Parentage assignment for hybrid and pure‐red progeny showed a better performance than pure‐Japanese progeny. This result could be due to the high level of allele loss in the parental genotypes. In addition, results indicated that only two sires contributed over 80% and 90% of red and hybrid progenies, respectively. This study gives a new molecular tool to support marker‐assisted selection in abalone hybrids produced in Chile.     

SNP discovery and gene annotation in the surf clam Mesodesma donacium

The main objective of this research was to identify single‐nucleotide polymorphisms (SNPs) from an Expressed Sequences Tags (EST) data set generated by 454 pyrosequencing in the soft clam Mesodesma donacium. A total of 180 159 ESTs were yielded from a M. donacium cDNA library. De novo assembly was performed using stringent calling parameters, producing 10 178 contigs and 41 765 singletons. Here, a total of 2594 SNPs were discovered related to 613 consensus sequences, achieving a frequency of 1 SNPs per 260 bp. SNP variants showed that A/G, A/T and C/T were the most abundant among the identified polymorphisms. We validated a total of 12 SNPs loci by HRMA for annotated genes such as heat shock protein‐70 and the translation elongation factor 1‐alpha. The Gene Ontology analysis regarding molecular function level revealed that sequences with SNPs were mainly classified to protein and nucleotide binding, as well hydrolase activity, ion binding and oxidoreductase activity. Further, biological processes like cellular and metabolic process, biogenesis, localization and biological regulation were highly annotated. The most expressed genes were related to the mitochondrial electron transport chain, senescence‐associated protein, ubiquitin and actin. Interestingly, some relevant genes related to immune response and biomineralization showed a high abundance, such as tumor necrosis factor (TNF)‐alpha‐receptor‐like protein, serine protease inhibitor, heat shock protein, aragonite‐binding protein and ferritin. This study contributes to relevant genes associated with functional polymorphisms and gives an overview for future genetic investigations.     

Geostatistical visualisation and spatial statistics for evaluation of the dispersion of epidemic highly pathogenic avian influenza subtype H5N1

The aim of this study was to evaluate a range of statistical and geostatistical methods for their usefulness in providing insights into how highly pathogenic avian influenza (HPAI) subtype H5N1 might spread through a national population of village poultry. The insights gained allow the generation of disease dispersion hypotheses. The case study data set consisted of 161 outbreaks of HPAI subtype H5N1 in village poultry reported in Romania between October 2005 and June 2006. Reports of village outbreaks (%) occurred in three waves: October-December (14%), February-March (16%), and May-June (68%). Risk mapping - based on variography and kriging - was used to visualize the evolution of the epidemic. Outbreaks first appeared in eastern and southern Romania, particularly within an area that forms part of the Danube River Delta. The largest phase of the epidemic affected villages in all parts of central, southern, and eastern Romania, but outbreaks were clustered in central Romania. Outbreaks spread in an east to west direction. By using geostatistical visualisation and spatial statistics, the evolution of the epidemic could be characterised into two parts: disease introduction, local spread, and sporadic outbreaks, and long-distance disease spread with rapid epidemic propagation. This is consistent with the hypothesis that the environment and landscape (specifically the Danube River Delta) played a critical role in the introduction and initial spread of HPAI subtype H5N1 during the autumn and winter of 2005, and that the movement of poultry might have introduced the infection into central Romania during the spring and summer of 2006. Further research focusing on the spatio-temporal interface between the two parts of the epidemic might reveal how and why it progressed from a confined, local epidemic to a large, national epidemic. Such information would assist efforts to limit the global spread of HPAI subtype H5N1.     

Anti-phytopathogenic activities of macro-algae extracts

Aqueous and ethanolic extracts obtained from nine Chilean marine macro-algae collected at different seasons were examined in vitro and in vivo for properties that reduce the growth of plant pathogens or decrease the injury severity of plant foliar tissues following pathogen infection. Particular crude aqueous or organic extracts showed effects on the growth of pathogenic bacteria whereas others displayed important effects against pathogenic fungi or viruses, either by inhibiting fungal mycelia growth or by reducing the disease symptoms in leaves caused by pathogen challenge. Organic extracts obtained from the brown-alga Lessonia trabeculata inhibited bacterial growth and reduced both the number and size of the necrotic lesion in tomato leaves following infection with Botrytis cinerea. Aqueous and ethanolic extracts from the red-alga Gracillaria chilensis prevent the growth of Phytophthora cinnamomi, showing a response which depends on doses and collecting-time. Similarly, aqueous and ethanolic extracts from the brown-alga Durvillaea antarctica were able to diminish the damage caused by tobacco mosaic virus (TMV) in tobacco leaves, and the aqueous procedure is, in addition, more effective and seasonally independent. These results suggest that macro-algae contain compounds with different chemical properties which could be considered for controlling specific plant pathogens.     

The efficacy of Romania’s protected areas network in conserving biodiversity

Romania’s protected areas network currently covers 19.29% of the national territory, a significant increase from the 4.1% protected prior to 1989. The increase occurred over the past 20 years with the creation of 27 National and Natural Parks, and recently of 382 protected areas as part of the pan-European Natura 2000 network. Considering the recent increase in number and area of protected lands, we investigated two core topics critical to achieving conservation goals: (1) conservation value and (2) resources for conservation. The newly created Natura 2000 sites overlapped 96.19% of the existing protected areas network, generating up to three different protection statuses for some sites. Conservation goals were often unclear, as the focus switched to protecting species and habitats of European-level concern. Despite the fivefold increase in protected area, many ecoregions were poorly represented in the new system. Planning for conservation neither involved the local communities nor utilized principles for spatial prioritization. Over 80% of the species of European conservation concern were included in at least one protected area, but plants and invertebrates were underrepresented. Administrative bodies were generally under-staffed and poorly financed, conditions that were reflected in a poor enforcement and implementation of conservation goals. Overall, Romania shares many conservation concerns with other Eastern and Central European countries. A regional approach to conserving biodiversity based on spatial prioritization, rigorous scientific documentation, and social acceptance is needed for the Natura 2000 network to achieve its goals.