Epitopes and nuclear localization analyses of canine distemper virus nucleocapsid protein by expression of its deletion mutants.

A series of nucleocapsid protein (NP)-deleted genes of the Onderstepoort strain was constructed in order to locate antigenic regions of the NP of canine distemper virus. The expression of proteins from 5'-deleted NP genes was examined in COS-7 cells by indirect immunofluorescence assay using three monoclonal antibodies (MAbs), c-5, f-5 and h-6, and a rabbit serum against NP. These MAbs reacted with two regions of NP. Amino acid residues from 1 to 80, and 337-358, were necessary and sufficient for formation of the epitopes identified by MAbs f-5 and h-6, and c-5, respectively. The proteins translated from intact or 3'-deleted genes were found to be localized in the nuclei of COS-7 cells, whereas the proteins from the 5'-deleted genes were mainly detected in the cytoplasm. These results suggested that 80 amino acid residues at the N-terminus are required for transportation of NP into the nucleus.     

Genome‐wide association studies reveal additional related loci for fatty acid composition in a Duroc pig multigenerational population

The aim of the present study was to detect quantitative trait loci affecting fatty acid composition in back fat and intramuscular fat in a Duroc pig population comprising seventh‐generation pedigrees using genome‐wide association studies (GWAS). In total, 305 animals were genotyped using single nucleotide polymorphisms (SNPs) array and five selected SNPs from regions containing known candidate genes related to fatty acid synthesis or metabolism. In total, 24 genome‐wide significant SNP regions were detected in 12 traits, and 76 genome‐wide suggestive SNP regions were detected in 33 traits. The Sus scrofa chromosome (SSC) 7 at 10.3 Mb was significantly associated with C17:0 in intramuscular fat, while the SSC9 at 13.6 Mb was significantly associated with C14:0 in intramuscular fat. The SSC12 at 1.0 Mb was significantly associated with C14:0 in back fat and the SSC14 at 121.0 Mb was significantly associated with C18:0 in intramuscular fat. These regions not only replicated previously reported loci containing some candidate genes involved in fatty acid composition (fatty acid synthase and stearoyl‐CoA desaturase) but also included several additional related loci.     

Changes in microbial communities in an apple orchard and its adjacent bush soil in response to season,land-use,and violet root rot infestation

Soil microbial communities in an apple orchard and its adjacent boundary bush with or without infestation by violet root rot were investigated for 2 years. Effects of season (spring, summer, and fall), land-use (apple orchard and boundary bush), and violet root rot (infested and healthy) on soil microbial populations, microbial activity, and microbial community structures were determined using physiological, cytochemical, and molecular (PCR-DGGE) approaches. Seasonal fluctuations were significant (P<0.05) in viable bacteria and fungal populations, bacterial FAME, fluorescein diacetate (FDA) hydrolysis, and diversity (H′) and evenness (J′) of community-level physiological profile (CLPP) in both years. However, seasonal differences of soil microbial guilds that utilize carbon substrate groups observed in the first year were not reproduced in the second year. The land-use factor differentiated the apple orchard from the boundary bush where viable bacterial population, bacterial FAME and FDA hydrolysis were significantly greater in both years. Infestation status of violet root rot, on the other hand, significantly increased bacterial FAME and FDA hydrolysis in both years. In addition, neither the land-use nor the disease infestation factor significantly influenced the utilization patterns of individual substrate guilds for the 2 years. In both years, saturated fatty acids were significantly more abundant in the orchard than in the bush soil, and monosaturated fatty acids vice versa. Principal component analyses for CLPP, FAME, and denaturing gradient gel electrophoresis (DGGE) consistently exhibited that, although the violet root rot influenced the soil microbial community structures both in the apple orchard and the boundary bush, overall magnitude of the difference in communities between the violet root rot infested and non-infested sites in the bush were greater than in the orchard, irrespective of the season. These results suggested that the seasonal and the land-use factors affected soil microbial community both quantitatively and qualitatively, whereas the impact of the violet root rot on the soil microbial community was mainly qualitative and more pronounced in the adjacent bush than in the orchard.     

Can spines deter deer browsing?: a field experiment using a shrub <Emphasis Type="Italic">Damnacanthus indicus</Emphasis>

We examined the defensive function of spines of Damnacanthus indicus against deer herbivory by experimentally removing spines in the field where deer density is high. Individuals of D. indicus whose spines had been removed had a higher probability of being browsed by deer than control individuals. In addition, plant height was significantly lower for individuals that were browsed than those that were not. These results support the notion that spines of D. indicus have a function to deter deer browsing. This study is the first to demonstrate experimentally the defensive function of spines against large mammals in temperate areas.     

Effects of medetomidine and xylazine on intraocular pressure and pupil size in healthy Beagle dogs

ObjectiveTo determine the effects of intramuscular (IM) administration of medetomidine and xylazine on intraocular pressure (IOP) and pupil size in normal dogs.Study designProspective, randomized, experimental, crossover trial.AnimalsFive healthy, purpose-bred Beagle dogs.MethodsEach dog was administered 11 IM injections of, respectively: physiological saline; medetomidine at doses of 5, 10, 20, 40 and 80 μg kg⁻¹, and xylazine at doses of 0.5, 1.0, 2.0, 4.0 and 8.0 mg kg⁻¹. Injections were administered at least 1 week apart. IOP and pupil size were measured at baseline (before treatment) and at 0.25, 0.50, 0.75, 1, 2, 3, 4, 5, 6, 7, 8 and 24 hours post-injection.ResultsA significant decrease in IOP was observed at 6 hours after 80 μg kg⁻¹ medetomidine compared with values at 0.25 and 0.50 hours, although there were no significant changes in IOP from baseline. In dogs treated with 8.0 mg kg⁻¹ xylazine, significant reductions in IOP were observed at 4 and 5 hours compared with that at 0.25 hours after administration. In dogs treated with 5, 10, 20 and 40 μg kg⁻¹ medetomidine and 0.5, 1.0 and 2.0 mg kg⁻¹ xylazine, there were no significant changes in IOP. Pupil size did not change significantly after any of the medetomidine or xylazine treatments compared with the baseline value.Conclusions and clinical relevanceLow or moderate doses of medetomidine or xylazine did not induce significant changes in IOP or pupil size. In contrast, high doses of medetomidine or xylazine induced significant changes up to 8 hours after treatment, but values remained within the normal canine physiological range. The results of this study suggest a lack of significant change in IOP and pupil size in healthy dogs administered low or moderate doses of xylazine or medetomidine.     

Critical swimming speed and maximum sustainable swimming speed of juvenile Pacific bluefin tuna, Thunnus orientalis

Tank wall collision is one of the major causes of mortality during the early-stage rearing of Pacific bluefin tuna, Thunnus orientalis (PBT). Therefore, to design a rearing environment that meets the needs of juvenile PBT, it is important to gather information about their swimming capabilities. We conducted experiments to examine the relative critical swimming speed (RCSS) and maximum sustainable swimming speed (MSSS) of early-stage PBT. The fish were kept in 3-tonne tanks and fed on artificial pellets every 2 h from dusk to dawn. We conducted two sets of experiments to measure swimming speed; the fish were introduced one at a time into a water funnel, and the water current velocity was gradually increased over time to estimate RCSS, or the water current was kept at a constant velocity to estimate MSSS. We measured the RCSS of 72 PBT juveniles (24–29 days after hatching (DAH); standard length (SL), 15.0 ± 2.3 mm) and the MSSS of 32 PBT juveniles (28–37 DAH; SL, 20.0 ± 5.1 mm) in the laboratory. The RCSS ranged from 4.7 to 20.3 SL/s (average, 12.4 ± 3.3 SL/s), and the MSSS was estimated to be approximately 4 SL/s. We speculate that introducing a water current in the rearing tank of no more than 4 SL/s could positively affect the survival of juvenile PBT.     

Habitat and prey selection of common minke,sei, and Bryde’s whales in mesoscale during summer in the subarctic and transition regions of the western North Pacific

This study represents the first quantitative analysis of the characteristics of the distribution areas and stomach contents of common minke whale Balaenoptera acutorostrata, sei whale B. borealis, and Bryde’s whale B. edeni in relation to oceanographic and prey environments in mid summer in the western North Pacific. Common minke whales were distributed within subarctic regions and the northernmost region of the transitional domain, coinciding with the main habitat of their preferred prey, Pacific saury Cololabis saira. Sei whales were mainly found in the northernmost part of the transition zone and showed prey preference for Japanese anchovy Engraulis japonica, which was significantly more abundant in the main distribution area of the whale than in its adjacent areas. “Hot spots” of Bryde’s whales were found in several regions of the transition zone between the subarctic boundary and the Kuroshio front. This whale species preferred Japanese anchovy as prey, for which the distribution density was significantly higher in the main distribution area of the whale than in the adjacent areas. These results indicate that the summer distributions of Pacific saury and Japanese anchovy greatly influence the distributions of these whale species, suggesting that the whales’ habitat selection is closely related to their prey selection.     

Flow field control via aeration adjustment for the enhancement of larval survival of the kelp grouper Epinephelus bruneus (Perciformes:Serranidae)

Flow field control via aeration adjustment for the enhancement of larval survival of the kelp grouper Epinephelus bruneus was examined. Aeration rate of 300 mL min^?1 was introduced during daylight (07:00–19:00 hours) and adjusted to 0, 300 and 900 mL min^?1 at night (19:00–07:00 hours). Larval sinking velocity±SD increased from 0.08 ± 0.05 to 0.26 ± 0.24 cm sec^?1 from 4 to 12 days after hatching (DAH), indicating their susceptibility to sink. Larvae reared in 300 mLmin^?1 attained the highest survival rate at 24.9 ± 3.4%, but remained significantly smaller in growth: 4.54 ± 0.56 mm compared with 4.82 ± 0.53 mm in 900 mL min^?1. The flow field in 300 and 900 mL min^?1 was at 10–20 and 15–25 cm above the bottom of the tank and 8.0 and 1.0 cm beneath the water surface. A favourable rearing condition was observed in 300 mL min^?1 as larvae were away from the bottom and surface areas, thus preventing them from dying due to sinking and surface tension‐related death (STRD). Although sinking death was decreased with an increasing aeration rate, the stronger flow had increased larval susceptibility to STRD. Our findings suggest that aeration at 300 mL min^?1 could enhance larval survival by reducing both sinking death and STRD.     

Aeration rate adjustment at night to prevent sinking syndrome‐related death in the tiger grouper Epinephelus fuscoguttatus (Perciformes:Serranidae) larvae

The effects of different aeration rates at night to prevent sinking syndrome‐related death (SSRD) of the tiger grouper, Epinephelus fuscoguttatus were examined. The aeration rates were fixed at 300 mL min^?1 at daytime (07:00–19:00 hours) and regulated to 0, 300 and 900 mL min^?1 at night (19:00–07:00 hours). Larval survival, growth, feeding intake, sinking velocity, distribution and behaviour, stress level, surface tension‐related death (STRD) and flow velocity distribution were assessed. The occurrence of SSRD in the tiger grouper was observed through the accelerated sinking velocity (Vl) (from 0.15 ± 0.09 cm s^?1 at 4 days AH to 0.41 ± 0.09 cm s^?1 at 12 days AH) coupled with larval passive swimming behaviour at night‐time. On the final day of experiment (15 days AH), larvae reared in 900 mL min^?1 at night had attained significantly higher (P < 0.05) survival (34.4 ± 5.5%), growth (5.8 ± 0.5 mm) and feeding intake (60.46 ± 6.98 ind. larva^?1). A favourable flow field for the tiger grouper was produced in 900 mL min^?1 at night‐time, in which larvae were transported 15–25 cm above the tank bottom and 1.0 cm beneath the water surface. Under these night‐time rearing conditions, larval stress level and number of STRD reared in 900 mL min^?1 compared with those observed in 300 mL min^?1 remained insignificant, indicating that strong turbulence of flow velocity was not detrimental for larvae. Our findings recommend aeration at 900 mL min^?1 at night as this could improve larval survival by reducing SSRD.