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991.
Purpose
Limited information exists about the zinc (Zn) status of major soils in northeast China, and their ability to supply Zn to soybeans. This study aims to establish the critical concentrations of Zn in soil for plant growth, to characterize the Zn forms in soil, to correlate the concentration of various Zn forms with Zn uptake by soybeans, and to identify the most effective means of Zn application. 相似文献992.
Patricia Miretzky Monica Rodriguez Avendaño Carolina Muñoz Alejandro Carrillo-Chavez 《Journal of Soils and Sediments》2011,11(4):619-627
Purpose
Tessier's sequential extraction method is usually used to study metal parting among different phases in soils. The main objective of this study was to determine the redistribution of trace metals which were added simultaneously to a sandy loam soil by use of the fractional distribution and reduced partition indexes and the risk of assessment code (RAC). 相似文献993.
Chang Xuan Mao Sining Chen Yitong Yang 《Journal of Agricultural, Biological & Environmental Statistics》2016,21(1):170-180
In proteomic studies, a population of proteins are often examined on a gel using a technique called two-dimensional gel eletrophoresis. The technique separates the protein population into individual protein spots on a two-dimensional gel by isoelectric charge and molecular weight. The resulting gel images are then processed by a software system for spot detection and subsequent analysis. The performance of a spot-detection program is evaluated by the total number of spots that are detected. A popular spot-detection program uses the “master–slave” approach, where all spots on “slave images” are subsets of the spots on the “master image.” We argue that this approach potentially misses a large proportion of proteins and propose a model that quantifies the lack of performance. We provide nonparametric estimators for the protein population size and the expected number of proteins to be detected if a “fusion-gel” approach was used. Using the data from a rat liver proteome study, we estimate that more than half of the protein population is missed by the master–slave approach. 相似文献
994.
Maryam Zolghadr Sergei Zuyev 《Journal of Agricultural, Biological & Environmental Statistics》2016,21(4):663-683
The paper develops methods to construct a one-stage optimal design of dilution experiments under the total available volume constraint typical for biomedical applications. We consider various design criteria based on the Fisher information both in Bayesian and non-Bayesian settings and show that the optimal design is typically one-atomic meaning that all the dilutions should be of the same size. The main tool is variational analysis of functions of a measure and the corresponding steepest descent-type numerical methods. Our approach is generic in the sense that it allows for inclusion of additional constraints and cost components, like the cost of materials and of the experiment itself. 相似文献
995.
996.
Mohammad Ashik Iqbal Khan Kihachi Ueno Sakae Horimoto Fuminori Komai Kinji Tanaka Yoshitaka Ono 《Biology and Fertility of Soils》2009,45(3):305-313
The aims of this study were to monitor the changes in physicochemical, including spectroscopic, and biological characteristics
during composting of green tea waste–rice bran compost (GRC) and to define parameters suitable for evaluating the stability
of GRC. Compost pile temperature reflected the initiation and stabilization of the composting process. The pH, electrical
conductivity, NO3
−-N content, and carbon-to-nitrogen ratio were measured as chemical properties of the compost. The color (CIELAB variables),
humification index (the absorption ratio Q
4/6 = A
472 / A
664 of 0.5 M NaOH extracts), absorption at 665 nm of acetone extracts, and Fourier-transform infrared (FT-IR) spectra were measured
to evaluate the organic matter transformation; germination of komatsuna or tomato seeds was measured to assess the potential
phytotoxicity of composting materials during composting. No single parameter was capable of giving substantial information
on the composting process, the nutrient balance, phytotoxicity, and organic matter decomposition. The FT-IR spectra at 3,300,
2,930, 2,852, and 1,065 cm−1 provided information on the molecular transformation of GRC during composting and they decreased over the composting. Most
of the assayed parameters showed no further change after about 90 days of composting suggesting that GRC can be used for agricultural
purposes after this period. 相似文献
997.
Mario Augusto Pagnotta Linda Mondini Pasquale Codianni Clara Fares 《Genetic Resources and Crop Evolution》2009,56(3):299-310
Emmer wheat (Triticum dicoccon Schrank, 2n = 4x = 28) consists in a hulled wheat; its cultivation has been drastically reduced during the last century as a consequence of
its low yield. Recently, its agronomic and nutritive values, as well as the increase of popularity of organic agriculture,
have led to a renewed interest making its cultivation economically viable in the marginal lands with an increase of the cultivated
areas. In Italy, it mainly survives in few marginal lands of central and southern Italy, where local varieties, adapted to
the natural environment from where they originate, are used; moreover, some selected lines have also been developed. In the
present work, agro-morphological and qualitative traits, together with molecular analyses of 20 emmer accessions consisting
of Italian landraces, breeding lines, and cultivars, were performed. The field experiments were conducted for two consecutive
years (2001/2002–2002/2003) in two locations: Viterbo in central Italy, and Foggia in south Italy. The analyzed emmer wheat
accessions showed a good amount of genetic variability for both evaluated agro-morphological and molecular traits. This study
illustrates an increase in earliness, GY, TW, TKW, and YI going from landraces, breeding lines to cultivars, while the variability
does not change proportionally. 相似文献
998.
999.
Hernán Laurentin 《Genetic Resources and Crop Evolution》2009,56(2):277-292
Characterizations of plant genetic resources based on molecular markers have been increased in the last years. Studies using
a broad range of markers applied on hundreds of plant species are the theoretical basis for inferring genetic diversity to
propose both breeding and conservation strategies. Despite increased importance of molecular characterization in plant genetic
resources, there is scarce information about analysis of this type of data. To fill this gap of information, this review discuss
the rationale behind analyses achieved to study genetic relationship among accessions (within and between groups) and to identify
accession, and also discuss the adequacy of some analyses and/or parameters for specific purposes. Genetic diversity within
groups may be either quantified for the whole group (parameters to choose will depend on type of marker), or quantified and
visualized for the relationships among individuals. Quantification parameters will be chosen depending on type of marker,
reproduction mode and relatedness of individuals. Visualization is achieved by hierarchical and non-hierarchical methods.
Genetic diversity between groups should be quantified either by analysis of molecular variance, or Nei’s parameters, or Wright’s
F-statistics. Efficiency of accession identification can be evaluated by maximal probability of identical match by chance
and number of resolved genotypes. 相似文献
1000.
Sreedhar Alwala Collins A. Kimbeng John C. Veremis Kenneth A. Gravois 《Euphytica》2009,167(1):127-142
The cultivated sugarcane (Saccharum spp. hybrids, 2n = 100–130) is one crop for which interspecific hybridization involving wild germplasm has provided a major breakthrough in
its improvement. Few clones were used in the initial hybridization event leading to a narrow genetic base for continued cultivar
development. Molecular breeding would facilitate the identification and introgression of novel alleles/genes from the wild
germplasm into cultivated sugarcane. We report the identification of molecular markers associated with sugar-related traits
using an F1 population derived from a cross between S. officinarum ‘Louisiana Striped’ × S. spontaneum ‘SES 147B’, the two major progenitor species of cultivated sugarcane. Genetic linkage maps of the S. officinarum and S. spontaneum parents were produced using the AFLP, SRAP and TRAP molecular marker techniques. The mapping population was evaluated for
sugar-related traits namely, Brix (B) and pol (P) at the early (E) and late (L) plant growing season in the plant cane (04)
and first ratoon (05) crops (04EB, 04LB, 04LP, 05EB and 05EP). For S. officinarum, combined across all the traits, a total of 30 putative QTLs was observed with LOD scores ranging from 2.51 to 7.48. The
phenotypic variation (adj. R2) explained by all QTLs per trait ranged from 22.1% (04LP) to 48.4% (04EB). For S. spontaneum, a total of 11 putative QTLs was observed with LOD scores ranging from 2.62 to 4.70 and adj. R2 ranging from 9.3% (04LP) to 43.0% (04LB). Nine digenic interactions (iQTL) were observed in S. officinarum whereas only three were observed in S. spontaneum. About half of the QTLs contributed by both progenitor species were associated with effects on the trait that was contrary
to expectations based on the phenotype of the parent contributing the allele. Quantitative trait loci and their associated
effects were consistent across crop-years and growing seasons with very few QTLs being unique to the early season. When the
data were reanalyzed using the non-parametric discriminant analysis (DA) approach, significant marker-trait associations were
detected for markers that were either identical to or in the vicinity of markers previously identified using the traditional
QTL approach. Discriminant analysis also pointed to previously unidentified markers some of which remained unlinked on the
map. These preliminary results suggest that DA could be used as a complementary approach to traditional QTL analysis in a
crop like sugarcane for which saturated linkage maps are unavailable or difficult to obtain. 相似文献