Seasonally tracking vertical and horizontal distribution of unionid mussels (Pronodularia japanensis): implications for agricultural drainage management

• 1. The vertical and horizontal distribution of unionoid mussels (Pronodularia japanensis) were examined in spring, late summer and winter for different size classes, including juveniles (<20 mm) and large adults (>50 mm), in an agricultural drainage channel in Central Japan.
• 2. A large number of small‐sized juveniles were found at the surface (0–3 cm depth) in spring, whereas approximately half of the adults remained in the deep layer (3–8 cm depth). Most individuals were found in the surface layer irrespective of size classes in summer, and approximately 70% of all individuals descended to the deep layer in winter.
• 3. Horizontal distribution did not substantially change across seasons and high density patches were consistently found in the areas where substrate appeared to be stable or hydraulically sheltered. Spatial distribution of small juveniles was relatively well predicted by the abundance of adults.
• 4. The size–frequency distribution was multi‐modal in three seasons and estimated numbers of newly recruited juveniles were highly variable in recent years, suggesting that juveniles were rarely found owing to irregular reproduction and/or recruitment not the overlooked habitat preferred by small‐sized juveniles.
• 5. As P. japanensis is characterized by the behaviour of burrowing down to a depth of ～10 cm, maintaining the processes of sediment deposition appears to be one of the critical criteria for the conservation of mussel habitats in agricultural drainage channel systems, which are commonly lined with smooth concrete materials. Copyright © 2010 John Wiley & Sons, Ltd.

     

Complete mitochondrial genome sequence of Japanese cockle Fulvia mutica (Cardiidae)

The complete mitochondrial genome (mt-genome) sequence of Fulvia mutica (Veneroida; Cardiidae) was determined. The genome is 19,110 bp in size and contains 42 genes, including the ATP synthase subunit 8 gene (atp8). All genes are on the same strand, as in other marine bivalves. It is extremely different in gene arrangement and size from that of Acanthocardia tuberculata, the only species belonging to Cardiidae with complete genome sequence data. The presence of putative atp8 genes in two additional reported bivalve species, A. tuberculata and Sinonovacula constricta was also inferred by revising their deposited sequence data. It was suggested that atp8 genes of heterodont bivalves could be translated to 37–39 amino acid sequences highly conserved within families, excluding Hiatella arctica with 53 amino acids. The mt-genome of F. mutica also contains two large duplicated regions related to different sequence motifs. One of the regions consists of five nearly identical copies of the 154 bp motif that includes a transfer RNA gene for cysteine. This region exhibited polymorphism in the number of repeats among individuals, suggesting the existence of a variable number of tandem repeats, which was expected to provide valuable information for developing useful genetic markers for phylogenetic study and population genetics.     

Novel reovirus isolation from an Ostrich (Struthio camelus) in Japan

An orthoreovirus was isolated from an Ostrich (Struthio camelus) and rapidly identified as orthoreovirus by the rapid determination of viral RNA sequences (RDV) system and electron microscopy. Phylogenetic analysis of the sigma A protein indicated that the isolate belonged to avian species and was closely related to chicken orthoreovirus strain 138. The results of the present study indicated that an ostrich orthoreovirus is slight different from other chicken orthoreoviruses and provided evidence of diversity among avian orthoreoviruses. To our knowledge, this is the first genetic report of an orthoreovirus isolated from an ostrich.     

Effect of Physical States of Nonpolar Lipids on Rheology,Ultracentrifugation, and Microstructure of Wheat Flour Dough

In the previous study, we investigated effect of physical state of nonpolar lipids of gluten‐starch model dough. This experiment examined a real wheat flour dough system to assess the role of fat crystals in the breadmaking processes. These experiments were performed with a baking test and an investigation of wheat flour dough through rheological measurements (both large and small deformations), scanning electron microscopy, and ultracentrifugation. As a result, we found that the added oil was absorbed in the gluten structure, causing the aggregation of the gluten, which gave rise to more elastic behavior. In contrast, solid fat seemed to be distributed uniformly between the starch granules in the dough, reducing the friction between the starch granules and facilitating thin gluten gel layers. These properties lead to the lower G′ value and the increased viscous behavior, which yields an increase in loaf volume. In addition, the supposed mechanism behind the large loaf volume described in the previous study was that fat provides a uniform distribution of the dough components, and that the dough can thus expand easily, resulting in a larger loaf volume, which was supported in the wheat flour dough system. In conclusion, we found that thin, expandable gluten films and the uniform dispersion of gluten and starch granules in the dough are prerequisites for attaining better baking performance.