SNP Markers Discovery in Soybean with Use of Degenerate Oligolucleotide Primed PCR

There are several strategies that can be applied in SNP discovery, as for example the locus-specific amplification of target genome regions （Primmer et al., 2002; Van et al., 2004） or simultaneous assembly of anonymous sequences which are the product of whole genome shotgun sequencing （Webber and Myers, 1997） or reduced representation shotgun sequencing （Altshuler et al., 2000）. The majority of these methods are highly cost-prohibitive, however, and there is a necessity for development of new strategies that would be more suitable for small and medium-scale laboratories.     

Current status and future strategy in breeding grasspea (Lathyrus sativus)

Efforts in grasspea (Lathyrus sativus) improvement have increased since the development of lines that are very low in the neurotoxin Beta-N-oxalyl-L-alpha-beta-diamino propionic acid (ODAP); also referred to as Beta-N oxalyl-amino-L-alanine (BOAA). Many programs now address several related aspects of improvement simultaneously. These include reduced ODAP concentrations, insect and disease resistance, nitrogen fixation, agronomic practices, fodder and forage production, and components for increased yielding ability. The coordinated, multidisciplinary approach now being applied to the genetic improvement of grasspea should allow the potential of this largely neglected grain legume to be fully realized.     

The Ecological Environment of Chinese Traditional Dwelling_Houses

This paper gives some analyses on the indoor climate and air quality in Chinese traditional quadral yard Buildings.A conclusion has been drawn that the living environment created by quadral yard building is of high quality.This kind of building is of great referential value in building human settlment environment with sustainable developmenlt and can also help to creat a better architectural form fitted in with the natural environment.     

The Optimization for Crop Planning and Some Advances for Water-Saving Crop Planning in the Semiarid Loess Plateau of China

The establishment of water-saving crop planning is an inevitable choice of the water-saving agriculture for the water-deficiency region in the arid and semiarid Loess Plateau of China and the world. The water-saving crop planning refers to the planting structure that centres the adjustment of the crop's adaptation to water, the optimization of temporal and spatial layout for crops, the local natural resources, marketing resources, human resources and financial input to enable region or basin with limited water resources to achieve the maximum economic, social and ecological benefits of planting industry under certain technology and economy. After the analysis on the research progress of optimization theory, optimization goals, optimization methods of water-saving cultivation structure and macro-control measures, it is pointed out that the main deficiencies of the current research of water-saving cultivation pattern optimization are lacking of a strong theoretical basis, and the immaturity of optimization technologies. The future crucial research direction will focus on five aspects such as the special optimization theory system, the division methods by studying the watershed unit and using 3S technology, optimization model based on multi-objective evolutionary algorithm, evaluation of rationality and macro-control measures on the basis of the public participation.     

Starch Content and Granule Size Distribution in Grains of Wheat in Relation to Post-Anthesis Water Deficits

Post-anthesis soil moisture condition is closely associated with grain yield and quality in wheat ( Triticum aestivum L.). To investigate the effect of post-anthesis water deficit (WD) on starch content and granule size distribution, pot-experiments were conducted in 2006–2007 and 2007–2008 growing seasons, using five wheat cultivars with different amylose content. The result showed that the grain starch granules had a bimodal curve in the volume and surface area distribution, and a unimodal curve was found in number distribution. Post-anthesis WD reduced the B-granules (<10 μm in diameter) volume % and surface area % in Nuomai50206 and Gaocheng8901, increased the proportion in Weimai10, whereas the effect on those in Jinan17 and Shannong15 was not significant. Post-anthesis WD decreased the number % of <2 μm starch granules, significantly in all cultivars. The amylose content was negatively correlated with the volume of <10 μm and positively correlated to >15 μm starch granules, respectively, suggesting that small starch granules (<10 μm) are low in amylose content, whereas, big starch granules (>15 μm) are high. The results indicate that the grain starch granule size distributions of Jinan17 and Shannong15 with high amylose content were less affected by WD, than those of Nuomai50206 and Gaocheng8901 with low amylose content.     

A SCAR marker linked to the N gene for resistance to root knot nematodes (Meloidogyne spp.) in pepper (Capsicum annuum L.)

The root-knot nematodes (Meloidogyne spp.) are important nematode pests and cause serious diseases in pepper in the world. No molecular markers linked to the nematodes resistance N gene have been reported. In this paper, ‘Carolina Wonder’ (Capsicum annuum L.), a sweet pepper line resistant to root-knot nematode with N gene, ‘20080-5-29’ (C. annuum L.), an inbred line susceptible to root-knot nematode with good horticultural characteristics, and their F₂ progeny with 320 individuals were used as materials. Evaluation of resistance and susceptibility of parental lines, F₁ and F₂ progeny inoculated with root-knot nematodes (Meloidogyne incognita) were carried out. ‘Bulked segregant analysis’ method was used to search for polymorphic markers from 512 pairs of AFLP primers. Based on the assessment of resistance and susceptibility and polymorphism of the AFLP marker in F₂ population, the genetic linkage distance between the AFLP marker and the N gene was estimated. One AFLP marker E39/M41-339 was obtained and transferred to a SCAR marker amplifying a 315 bp DNA fragment linked to the N resistant allele and a 331 bp fragment linked to the N⁺ susceptible allele. The distance between the molecular marker and the nematodes resistance N gene is 6.3 cM. This research delivered a valuable tool for the marker assisted selection of nematodes resistance in pepper.     

Modeling the water budget in a deep caldera lake and its hydrologic assessment: Lake Ikeda, Japan

The hydrologic assessment of a lake water budget can be helpful in achieving proper water management and sustainable water use. A model to analyze a lake water budget was developed and verified for Lake Ikeda, Japan. Lake evaporation was estimated by numerical analyses of lake water temperature and the lake energy budget. Inflow from the lake catchment area and leakage from the lake bottom were estimated based on the tank model and Darcy's law, and the model parameters were optimized by the shuffled complex evolution method. The estimated monthly lake evaporation rate is consistent with the evaporation rate estimated by the energy budget Bowen ratio method based on in situ data from 2004 to 2005. Moreover, the calculated time series of daily lake levels agrees well with those of measured lake levels during 1983 to 1999. Thus, the model is useful for evaluating the lake water budget. Numerical analysis reveals seasonal and annual variation characteristics in the water budget components. Precipitation, inflow from the catchment area, and river water supply are generally high during the rainy season from June to July with substantial annual variation. Lake evaporation is greatest in October and least in April, but the annual variation is relatively small. Agricultural water use is relatively high from April to September. There are no marked seasonal changes in leakage and drinking water use. The lake level is generally highest in September and lowest in March, which is characterized by seasonal changes in water budget components. The model was also applied to 17-year simulations under hypothetical hydrologic conditions to examine the effect of water use and agricultural water management on the lake level. Results indicate that river water supply, provided under the agricultural water management system, effectively compensates for the decrease in lake water resulting from agricultural water use.     

Mineral content of three olive cultivars irrigated with treated industrial wastewater

The reuse of saline treated industrial wastewater generated by textile firms mixed with municipal domestic effluent for irrigation was used to asses its effect on the mineral content of three olive (Olea europaea L.) cultivars under greenhouse and field conditions during two complete vegetative cycles. Chemical analysis of the treated wastewater indicated that the element concentrations fall within the permissible range of irrigation water used for plants. However, little impermissible accumulation of Na and Mg higher than the recommended maximum concentration was observed. Irrigation water with six electrical conductivities (EC = 0.78, 1.0, 2.0, 3.0, 4.0 and 5.0 dS m⁻¹ in treatments T₀, T₁, T₂, T₃, T₄, T₅, respectively) were compared in the greenhouse experiment. The olive trees in the field experiment were trickle irrigated with potable water and treated wastewater (average EC = 4.2 dS m⁻¹). The results of the greenhouse experiment showed that leaf N, Cu, Mn, Fe, Pb, and Na contents increased with increasing salinity of the treated wastewater. This increase was accompanied with a decrease in K and Mg contents. Leaf Ca and Cl concentrations were not considerably affected. Ion analysis in roots indicated that the contents of P, Na, Cl, Mn, and Pb increased while K decreased as treated wastewater salinity increased. Consequently, in most cases T₄ and T₅ gave a highly significant increase or decrease in accumulation of the previously mentioned minerals. A considerable variation in the studied cultivars was noticed. ‘Nabali’ was considered the most tolerant cultivar for the high salinity levels of the treated wastewater; its transporting selectivity of Na from root to leaf was higher and more Na was retained in the roots. Tissue analysis of leaves indicated that the element concentrations were within the adequate levels except those of Fe in ‘Nabali’ and ‘Manzanillo’, Na in ‘Improved Nabali’ and Cu in ‘Nabali’ and ‘Manzanillo’. In view of these findings, the negligible accumulation of minerals in leaves and roots indicated that this kind of textile effluent can be used as a valid alternative for irrigation of olive orchards with continuous monitoring of mineral levels.     

FSWM: A hybrid fuzzy-stochastic water-management model for agricultural sustainability under uncertainty

A hybrid fuzzy-stochastic water-management (FSWM) model is developed for agricultural sustainability under uncertainty, based on advancement of a multistage fuzzy-stochastic quadratic programming (MFSQP) approach. In MFSQP, uncertainties presented in terms of fuzziness and randomness can be incorporated within a multilayer scenario tree, such that revised decisions are permitted in each time period based on the realized values of the uncertain events. Moreover, fuzzy quadratic terms are used in the objective function to minimize the variation of satisfaction degrees among the constraints; it allows an increased flexibility in controlling the system risk in the optimization process. Results of the case study indicate that useful solutions for the planning of agricultural water management have been obtained. In the FSWM model, a number of policies for agricultural water supply are conducted. The results obtained can help decision makers to identify desired water-allocation schemes for agricultural sustainability under uncertainty, particularly when limited water resources are available for multiple competing users.     

Evaluation of surface water drainage systems for cropping in the Central Highlands of Ethiopia

In Ethiopia vertisols cover about 10% of the total land area and is the fourth most important soil used for crop production, accounting for nearly 23% of the total arable land used for crop production. More than half of the vertisols are found in the Central Highlands of Ethiopia, with an altitude of more than 1500 m above mean sea level. The unique physical and chemical properties of these soils and the high rainfall during the main cropping season create severe surface waterlogging problems which hinder crop production activities. Severe surface waterlogging affects the growth of plants by impeding nutrient uptake and creating oxygen deficiency around the root zone. To address this crop production problem, three surface water drainage methods, namely broad bed and furrow (BBF), ditch, and flat (traditional) methods were evaluated using the water balance of the plant root zone and wheat as a test crop. The experiment was conducted at the Ginchi Research Station in the central highlands of Ethiopia over two consecutive seasons (2000 and 2001). The results showed that both the BBF and the ditch drainage methods gave about 33% and 22% more grain yield than the flat treatment, respectively. However, there were no significant differences between BBF and ditch for both grain and biomass yield during both experimental seasons. During both seasons the total water balance (ΔW_r) at the root zone especially, in the months of June, July and August on all the treatments was higher than the crop water requirement (ETc) and showed no significant difference between the treatments. Thus, the results of this study indicated that the soil water in the root zone was not significantly altered by surface drainage systems and therefore implies the need of further improvement of the different surface drainage methods regarding improving the waterlogging condition and hence the productivity of the vertisols in the Central Highlands of Ethiopia.