Screening for Rift Valley fever infection in northern Somalia: a GIS based survey method to overcome the lack of sampling frame

Following repeated import bans imposed by Saudi Arabia on livestock originated from Somalia due to suspicion of Rift Valley fever (RVF) presence and the severe socio-economic consequences of this, it was imperative for the Somaliland government to carry out surveillance activities in order to determine the status of transboundary diseases in its territory. A GIS computer software (Arcview) was used to overcome the lack of lists of sampling sites due to the high mobility of pastoral nomadic herds in the study area. This method proved very convenient and flexible for the random selection of sampling sites and thus the compliance with the requirements by the World Organisation for Animal Health (OIE) for statistically valid methods if the surveillance outcome is to meet international recognition and acceptance. Screening in Somaliland in 2001 and in Puntland in 2003 which targeted mainly sheep and goats aged 1-2 years (97% of surveyed animals) revealed no signs compatible with the disease but an overall sero-prevalence of 2+/-0.02% (90/4570) and 5+/-0.3% (206/4050), respectively. The spatial distribution showed clusters of high sero-prevalence located mostly in the Nugal Valley. This trend was confirmed by the follow-up survey implemented in Somaliland in 2004 with a herd prevalence of 80+/-6% and a within-herd prevalence up to 50% located again in the Nugal Valley. This result suggests the maintenance and increase of RVF virus activity in the valley. In addition conditions favourable to the breeding and survival of the vector population and the high density of livestock make the Nugal Valley an area of high risk for a RVF outbreak where sentinel herds will be placed.     

Dispersal of conidia of Fusicladium eriobotryae and spatial patterns of scab in loquat orchards in Spain

Dispersal of conidia of Fusicladium eriobotryae, the causal agent of loquat scab, was investigated in two loquat orchards in Spain from 2010 to 2012. A volumetric spore sampler, horizontally and vertically orientated microscope slides, and rain collectors were placed in loquat fields to trap conidia of F. eriobotryae. No conidia were collected in the volumetric sampler, and highly variable numbers of conidia were collected in the rain gatherers. Large numbers of conidia were collected by microscope slides, particularly by those held in a horizontal orientation compared with those held in a vertical orientation. Approximately 90 % of the F. eriobotryae conidia were collected during rainy periods. Based on ROC and Bayesian analysis, using ≥ 0.2 mm rainfall as a cut-off value resulted in a high probability of correctly predicting actual conidial dispersal, and had a low probability of failing to predict actual conidial dispersal. Based on the index of dispersion and the binary power law, the incidence of loquat scab on fruit was highly aggregated in space between and within trees, and aggregation was influenced by disease incidence. Our results demonstrate, for the first time, that F. eriobotryae is dispersed mainly in rain splash. The results will be integrated into a mechanistic, weather-driven, disease prediction model that should help growers to minimize fungicide application for the management of loquat scab.     

Sources and seasonal dynamics of inoculum for brown spot disease of pear

The dynamics of the production of Stemphylium vesicarium conidia and Pleospora allii ascospores from different inoculum sources on the ground were compared in a model system of a wildflower meadow mainly composed of yellow foxtail, creeping cinquefoil and white clover. The meadow was either inoculated (each October) or not inoculated with a virulent strain of S. vesicarium, and either covered or not covered with a litter of inoculated pear leaves. Spore traps positioned a few centimetres above the ground were exposed for 170 7-day periods between October 2003 and December 2006. Ascospores and conidia were trapped in 46 and 25% of samples, respectively. Ascospore numbers trapped from the pear leaf litter were about five times higher than those from the meadow, while conidial numbers were similar from the different inoculum sources. The ascosporic season was very long, with two main trapping periods: December–April, and August–October; the former was most important for the leaf litter, the latter for the meadow. The conidial season lasted from April to November, with 92% of conidia caught between July and September. The fungus persistently colonized the meadow: the meadow inoculated in early October 2003 produced spores until autumn 2006. The present work demonstrates that orchard ground is an important source of inoculum for brown spot of pear. Thus, it is important to reduce inoculum by managing the orchard ground all year long.     

Control of brown spot of pear by reducing the overwintering inoculum through sanitation

Stemphylium vesicarium, the causal agent of brown spot of pear, overwinters in the leaf residues of pear and herbaceous plants of the orchard floor. Pseudothecia of the teleomorph, Pleospora allii, are formed on these residues where they produce ascospores. New methods were tested aimed at reducing this overwintering inoculum and increasing the efficacy of control of brown spot of pear. Sanitation methods were evaluated in nine trials in Girona (Spain) and Ferrara (Italy) over a 4-year period. The sanitation methods were leaf litter removal in December to February, and application of biological control agents (commercial formulates of Trichoderma spp.) to the orchard ground cover from February to May. Fungicides were also applied to the trees during the pear-growing season, scheduled according to the BSPcast model. The different methods were tested as stand-alone applications or in combination. All methods consistently reduced the disease incidence at harvest on fruit with an efficacy between 30 to 60% for leaf litter removal and more than 60% for the combination of leaf litter removal and biological control. Efficacy of sanitation alone (leaf litter removal and biological control) in reducing the brown spot level on fruit was similar in most of the trials to the efficacy obtained when fungicides were applied alone. However, integration of sanitation methods and fungicides did not improve the efficacy of disease control over the level provided by fungicides alone.     

Combining sanitation and disease modelling for control of grapevine powdery mildew

Chasmothecia of Erysiphe necator form in one season, survive winter and discharge ascospores that cause primary infections and trigger powdery mildew epidemics in the next season. A strategy for powdery mildew control was developed based on (i) the reduction in overwintering chasmothecia and on (ii) spring fungicide applications to control ascosporic infections timed based on estimate risk (two to five sprays per season). Several fungicides, the hyperparasite Ampelomyces quisqualis, and a mineral oil product were first tested as separate applications in a greenhouse and in vineyards. In the greenhouse, A. quisqualis suppressed chasmothecia formation by 41 %; fungicides and mineral oil suppressed chasmothecia formation by 63 % and ascospore viability by 71 %. In vineyards, application of boscalid + kresoxim-methyl or meptyldinocap once after harvest, as well as application of A. quisqualis pre- and post-harvest, delayed disease onset and epidemic development in the following season by 1 to 3 weeks and lowered disease severity (up to the pea-sized berry stage) by 56 to 63 %. Risk-based applications of sulphur and of synthetic fungicides provided the same control as the grower spray program but required fewer applications (average reduction of 47 %). Sanitation strategies were then tested by combining products and application times (late-season, and/or pre-bud break, and/or spring). Adequate disease control with a reduced number of sprays was achieved with the following combination: two applications of A. quisqualis (pre- and post-harvest), one application of mineral oil before bud break, and model-based applications of sulphur fungicides between bud break and fruit set.     

The fifth anniversary of the European Food Safety Authority (EFSA): mission, organization, functioning and main results

The European Food Safety Authority (EFSA), founded by Regulation EC 178/2002, is now in its fifth year of activity and has already gone through a positive external evaluation procedure. This paper takes the reader through the many objectives of this Organization in defining the mission of EFSA as well as the organizational structure that has been developed so far in order to meet the many challenges confronting food safety in Europe. EFSA's working procedures are also analyzed especially in relation to the main task of ensuring high transparency and quality of the outcome. As indicated by the many results reviewed in the present paper mainly in the domains of risk assessment and risk communication, EFSA's taking off has been very successful so far. EFSA is currently working at the forefront of science on a number of difficult issues such as, among others: (i) risk assessment of compound which are both genotoxic and carcinogenic; (ii) safety of botanicals and botanical preparations; (iii) qualified presumption of safety for micro-organisms; (iv) risk-benefit assessment; (v) nutrition and health claims; and (vi) safety of food derived from animal clones and their offsprings. The next future of EFSA will be strongly characterized by the completion and consolidation of its structure and by the further strengthening of scientific cooperation with institutions/organizations in Member States and at an international level.     

Effects of the extensive culture system as finishing production strategy on biometric and chemical parameters in rainbow trout

The effect of finishing extensive farming period, to reduce fat content and manipulate the fatty acid profile of fish muscle, was evaluated in rainbow trout. Fish were stocked in an artificial lake, in which fish were fed only on naturally available nutrients with no supply of artificial feed, for different lengths of time from 0 to 120 days. No weight loss was noted during the whole finishing period while total length increased from 228±7 to 269±3 mm and the condition factor decreased from 1.41±0.04 to 0.89±0.02. The total fat content of the fillets decreased considerably from 4.7±0.6% at the beginning to 2.4±0.4% and 0.7±0.2% after 45 and 120 days respectively. Fillet fatty acid composition was affected by the time of stocking in the extensive farm. In contrast to the reduction in C18:1n‐9, C18:2n‐6, total monounsaturated fatty acid and total n‐6 percent values, an increase in the C20:5n‐3, C22:6n‐3, total polyunsaturated fatty acid and total n‐3 percent values was observed. It was shown that while other finishing strategies for salmonids have some disadvantages, the extensive culture system seems to be a potentially useful tool for increasing the general quality of the end product.     

Seroprevalence for norovirus genogroups GII and GIV in captive non‐human primates

Noroviruses (NoVs) are a major cause of epidemic gastroenteritis in children and adults. Several pieces of evidence suggest that viruses genetically and antigenically closely related to human NoVs might infect animals, raising public health concerns about potential cross‐species transmission. The natural susceptibility of non‐human primates (NPHs) to human NoV infections has already been reported, but a limited amount of data is currently available. In order to start filling this gap, we screened a total of 86 serum samples of seven different species of NPHs housed at the Zoological Garden (Bioparco) of Rome (Italy), collected between 2001 and 2017, using an enzyme‐linked immunosorbent assay (ELISA) based on virus‐like particles (VLPs) of human GII.4 and GIV.1 NoVs. Antibodies specific for both genotypes were detected with an overall prevalence of 32.6%. In detail, IgG antibodies against GII.4 NoVs were found in 18 Japanese macaques (29.0%, 18/62), a mandrill (10.0%, 1/10), a white‐crowned mangabey (16.6%, 1/6) and in an orangutan (33.3%, 1/3). Twelve macaques (19.3%, 12/62), five mandrills (50.0%, 5/10), two chimpanzees (100%, 2/2) and a white‐crowned mangabey (16.6%, 1/6) showed antibodies for GIV.1 NoVs. The findings of this study confirm the natural susceptibility of captive NHPs to GII NoV infections. In addition, IgG antibodies against GIV.1 were detected, suggesting that NHPs are exposed to GIV NoVs or to antigenically related NoV strains.     

Rhizoctonia solani Kühn AG 2-1 on kohlrabi in Italy

Rhizoctonia solani AG 2-1 was recorded in Central Italy on kohlrabi plants showing root and stem rot. After artificial inoculation the fungus caused damping-off of 7-day-old seedlings and root and stem rot of 4-month-old plants developed after 15 days of incubation. This seems to be the first record ofR. solani AG 2-1 on kohlrabi.