Salt-induced changes in pork myofibrillar tissue investigated by FT-IR microspectroscopy and light microscopy

FT-IR microspectroscopy and light microscopy were used to investigate pork muscle musculus semitendinosus samples, taken from three animals, that were subjected to brine salting at different concentrations (0.9, 3, 6, and 9% NaCl). Differences in spectral characteristics and in microstructure were observed in meat from animals differing in initial pH and varying salt concentrations. The FT-IR data displayed changes in the amide I region from 1700 to 1600 cm(-1). This spectral range was analyzed by principal component analysis (PCA) and partial least-squares regression (PLSR). These methods revealed correlations between the spectral data and the different animals, salt content, moisture content, pH value, and myofiber diameter. A shrinking share of alpha-helical components was related to an increase in salt concentration in the muscle. At the same time, a greater share in nonhydrogenated C=O groups (1668 cm(-1)) was related to an increase in salt concentration in the meat. The share of aggregated beta-strands differed with respect to the different animals but was not influenced by salt concentration. The meat at higher pHs (>6) had less aggregated beta-strands than that at lower pHs (5.6-5.7). It could be demonstrated that simultaneous with changes in microstructure, pH value, salt, and moisture content were alterations in the protein amide I region as measured by FT-IR microspectroscopy, revealing a relationship between these biophysical and chemical parameters and secondary protein structure attributes.     

Identifying high yielding stable winter wheat genotypes for irrigated environments in Central and West Asia

Improved winter wheat (Triticum aestivum L.) cultivars are needed for the diverse environments in Central and West Asia to improve rural livelihoods. This study was conducted to determine the performance of elite winter wheat breeding lines developed by the International Winter Wheat Improvement Program (IWWIP), to analyze their stability across diverse environments, and to identify superior genotypes that could be valuable for winter wheat improvement or varietal release. One hundred and one advanced winter wheat breeding lines and four check cultivars were tested over a 5-year period (2004–2008). Grain yield and agronomic traits were analyzed. Stability and genotypic superiority for grain yield were determined using genotype and genotype × environment (GGE) biplot analysis. The experimental genotypes showed high levels of grain yield in each year, with mean values ranging from 3.9 to 6.7 t ha⁻¹. A set of 25 experimental genotypes was identified. These were either equal or superior to the best check based on their high mean yield and stability across environments as assessed by the GGE biplot analysis. The more stable high yielding genotypes were ID800994.W/Falke, Agri/Nac//Attila, ID800994W/Vee//F900K/3/Pony/Opata, AU//YT542/N10B/3/II8260/4/JI/Hys/5/Yunnat Esskiy/6/KS82W409/Spn and F130-L-1-12/MV12. The superior genotypes also had acceptable maturity, plant height and 1,000-kernel weight. Among the superior lines, Agri/Nac//Attila and Shark/F4105W2.1 have already been proposed for release in Kyrgyzstan and Georgia, respectively. The findings provide information on wide adaptation of the internationally important winter wheat genotypes, and demonstrate that the IWWIP program is enriching the germplasm base in the region with superior winter wheat genotypes to the benefit of national and international winter wheat improvement programs.     

A combined hydraulic and toxicological approach to assess re-suspended sediments during simulated flood events—part II: an interdisciplinary experimental methodology

Purpose

Flood events are expected to increase both in intensity and frequency due to climate change in the near future. From an environmental toxicology perspective, there is concern that such flood events could lead to the remobilization of contaminated sediment layers in rivers. The aim of this pilot study was to establish a novel and interdisciplinary framework combining methods of hydrodynamic engineering and ecotoxicological assessment to enable investigation of the potential risks associated with such remobilization events.

Materials and methods

Formulated sediment was prepared according to OECD guideline 218 and spiked with a mixture of four polycyclic aromatic hydrocarbons (phenanthrene, chrysene, pyrene, benzo[a]pyrene) at concentrations of 3.3?C8.3?mg?kg^?1 dry weight. Rainbow trout (Oncorhynchus mykiss) were exposed as test animals to re-suspended sediments in three out of five experiments. The experiments were carried out in an annular flume designed to investigate transport behaviour of fine-grained sediments. Several physicochemical (e.g. pH) and sedimentological (e.g. turbidity) parameters were measured to characterise environmental conditions and erosion behaviour of sediments. Furthermore, exposure concentrations were measured by means of an in vitro assay (7-ethoxyresorufin-o-deethylase (EROD), RTL-W1 cell assay) and chemical analysis.

Results and discussion

Preparation and spiking of large amounts of formulated sediments were feasible but not practical. Successful spiking could be confirmed by the bioanalytical methods with the spiked sediments showing significantly elevated EROD induction compared to control sediments. Conditions within the annular flume remained stable throughout all experiments and were adequate to support rainbow trout. Flood events were successfully simulated, resulting in re-suspension of formulated sediment. Different erosion behaviours of sediments during the simulated flood events were observed and could be associated with changes in microbial composition of sediments due to differences in storage conditions. Therefore, maintaining constant storage conditions of formulated sediments is crucial to enable consistency and comparability among erosion experiments.

Conclusions

This study clearly demonstrated the feasibility of a combined hydro-toxicological approach in support of the investigation of the potential ecotoxicological relevance of sediment re-suspension events. However, based on the results presented here, it is recommended to include additional physicochemical parameters, such as redox potential and conductivity, and to extend the experimental setup to natural sediments and different aquatic organisms. Future studies will use natural sediments containing representative microbial communities and extracellular polymeric substances to enable extrapolation from the annular flume to conditions in natural flowing waters.     

Ultrasonography of the reticulum in 30 healthy Saanen goats

Background

The reticulum plays a crucial role in the ruminant digestive tract because the primary cycle of rumen motility always starts with a reticular contraction. In contrast to cattle, there are only few results on the ultrasonographic examination of the reticulum in goats. Therefore, it was the goal of the present study, to describe the results of ultrasonography of the reticulum of 30 healthy Saanen goats.

Methods

Ultrasonography was carried out on standing, non-sedated animals using a 5.0 MHz linear transducer. The shape, contour and motility of the reticulum were investigated. A nine-minute video recording of the reticulum was made for each goat and the frequency, duration and amplitude of reticular contractions were calculated as described for cattle.

Results

The reticulum appeared as a crescent-shaped structure with a smooth contour located immediately adjacent to the diaphragm. 0.8 to 2.1 (1.41 ± 0.31) reticular contractions were seen per minute. In all goats, biphasic reticular contractions were observed. 90% of the goats also had monophasic reticular contractions, and two had triphasic contractions. During the nine-minute observation periods, there were 0 to 6 monophasic reticular contractions and 6 to 15 biphasic contractions per goat. The duration of the biphasic contractions was 6.56 ± 0.74 s, which was significantly longer than the monophasic contractions at 4.31 ± 0.81 s. The average interval between two reticular contractions was 45.06 ± 12.57 s.

Conclusion

Ultrasonography of the reticulum in goats is a valuable tool to characterise the appearance and motility of this organ. In addition to the biphasic motility pattern seen in cattle the reticular motility of goats is characterized by monophasic reticular contractions. The results of the present study are an important contribution for better understanding of the reticular motility in goats.     

Ultrasonography of the rumen in 30 Saanen goats

This study describes the results of ultrasonographic examination of the rumen in 30 healthy Saanen goats. A linear or convex transducer with a variable frequency of 5 to 13 MHz was used to scan standing, non-sedated goats. The location and size of the rumen, the distance between the wall of the rumen and abdominal wall and the appearance and size of the gas, fibre mat and fluid layers of the ruminal contents were assessed. The rumen was seen as a large organ medial to the left abdominal wall. The wall of the rumen appeared as a thick echogenic line. The longitudinal groove was seen as an echogenic notch, which divided the rumen into the dorsal and ventral sacs. The rumen could be visualized from the 9th to 12th intercostal space (ICS) and flank on the left side in all the goats. The rumen was largest in the 12th ICS at 41.6 ± 5.13 cm and smallest in the 8th ICS at 11.3 ± 4.29 cm. The dorsal sac of the rumen was largest in the left cranial flank (17.4 ± 4.43 cm) and the ventral sac was largest in the 12th ICS on the left (29.1 ± 6.03 cm). In the cranial left flank, the rumen was situated immediately adjacent to the abdominal wall in all the goats. The spleen was located between the rumen and abdominal wall in the 8th to 12 th ICS in many of the goats. The gas, fibre mat and fluid layers of the ruminal contents could be visualized in all the goats. The gas layer was 9.9 ± 3.05 cm, the fibre mat layer 16.0 ± 4.55 cm and the fluid layer 12.2 ± 5.57 cm.     

Reference Value Advisor: a new freeware set of macroinstructions to calculate reference intervals with Microsoft Excel

Abstract: International recommendations for determination of reference intervals have been recently updated, especially for small reference sample groups, and use of the robust method and Box–Cox transformation is now recommended. Unfortunately, these methods are not included in most software programs used for data analysis by clinical laboratories. We have created a set of macroinstructions, named Reference Value Advisor, for use in Microsoft Excel to calculate reference limits applying different methods. For any series of data, Reference Value Advisor calculates reference limits (with 90% confidence intervals [CI]) using a nonparametric method when n≥40 and by parametric and robust methods from native and Box–Cox transformed values; tests normality of distributions using the Anderson–Darling test and outliers using Tukey and Dixon–Reed tests; displays the distribution of values in dot plots and histograms and constructs Q–Q plots for visual inspection of normality; and provides minimal guidelines in the form of comments based on international recommendations. The critical steps in determination of reference intervals are correct selection of as many reference individuals as possible and analysis of specimens in controlled preanalytical and analytical conditions. Computing tools cannot compensate for flaws in selection and size of the reference sample group and handling and analysis of samples. However, if those steps are performed properly, Reference Value Advisor, available as freeware at http://www.biostat.envt.fr/spip/spip.php?article63 , permits rapid assessment and comparison of results calculated using different methods, including currently unavailable methods. This allows for selection of the most appropriate method, especially as the program provides the CI of limits. It should be useful in veterinary clinical pathology when only small reference sample groups are available.     

Nutritional standards and nutritional diagnosis of the Conilon coffee plants in phenological growth stages

The objective of this study was to establish a nutrient sufficiency range and DRIS standards of Conilon coffee grown in southern Bahia, Brazil for the pre-flowering and grain-filling stages and to perform a nutritional diagnosis of these plants using different methods. The collections were performed in 24 Conilon coffee farm fields to establish the leaf nutritional standards, and 278 samples were collected to the nutritional diagnosis. The nutritional diagnosis was performed by using the sufficiency range criterion and the DRIS method. The nutrient sufficiency range and the DRIS standards must be specific to each phenological stage of the Conilon coffee plants. The leaf concentrations of calcium (Ca), sulfur (S), and boron (B) were higher in the pre-flowering stage; and the leaf concentrations of nitrogen (N), potassium (K), copper (Cu), and zinc (Zn) were higher in the grain-filling stage.     

Cation exchange capacity of roots: Titration,sum of exchangeable cations,copper adsorption

The cation exchange capacity of roots (CECR) has been measured according to three different methods : titration of H‐roots with NaOH in the presence of CaCl₂, MgCl₂, or NaCl 0.1 N, saturation of roots with mixed Ca‐Mg‐Na solutions of eight different compositions and extraction of the adsorbed cations with copper, saturation of roots with Cu‐ions and extraction with HC1. Two types of roots were studied : roots of ryegrass (Lolium multiflorum Lm.) and roots of clover (Trifolium pratense L.)

The very good coincidence of the results from the three methods tends to prove the reliability of the experimental procedures. The simplicity and the reproducibility of the Cu‐method renders it recommendable in view of possible standardization of the methods in the future.     

Molecular analysis of genetic variation in potato (Solarium tuberosum L.). II. International cultivar spectrum

Summary Seventy-five commercial potato cultivars orginating from North America, Europe and Japan were analysed using AFLP and SSR markers to assess their genetic relationships. Results of cluster and principal coordinate analysis reflect in most cases known pedigree information. Independent of the marker system used it was possible to identify groups based on their geographical descent. Cultivars from Central and East Europe formed two overlapping pools. An Anglo-American gene pool was also identified. Additionally, principal coordinate analysis based on AFLP data uncovered that this pool is subdivided in two groups. One group is more closely related to the European pools and dominated by cultivars with immediate background of cv. Kathadin. Japanese cultivars gave no distinct cluster.