Microbial biomass and nitrogen transformations in surface soils strongly acidified by volcanic hydrogen sulfide deposition in Osorezan, Japan

Volcanic acidification has created unique ecosystems that have had to adapt to the acidic environments in volcanic regions. To characterize the primary microbial properties of strongly acidified soils in such environments, we investigated microbial biomass, nitrogen transformations and other relevant chemical properties in the surface soils of solfatara and forests from Osorezan, a typical volcanic region in Japan, and compared the results to common Japanese forest soils. Soil microbial biomass C (MBC) and N (MBN) were determined using the chloroform fumigation–extraction method. Potential net N mineralization and net nitrification were measured in aerobic laboratory incubations. Long-term acidification in the Osorezan soils by volcanic hydrogen sulfide deposition caused low soil pH (3.0–3.8), base cation deficiency and increased concentrations of toxic ions such as Al³⁺. The proportions of MBC to total carbon (MBC/TC ratio) and MBN to total nitrogen (MBN/TN ratio) were lower than those in common Japanese forest soils. The extreme acidic conditions may have inhibited microbial survival in the Osorezan acid soils. Net N mineralization occurred at rates comparable to those in common Cryptomeria japonica forest soils, probably because of the presence of acid-tolerant soil microorganisms. Net nitrification was completely inhibited and autotrophic ammonia oxidizers were not detected by the MPN method. The inhibition of nitrification prevents nitrogen leaching from the soils, thus maintaining a nitrogen cycle in the volcanic acid region in which     (and NH₃) is recycled among microorganisms and plants.     

Amiprophosmethyl-induced efficient in vitro production of polyploids in raphanobrassica with the aid of aminoethoxyvinylglycine (AVG) in the culture medium

Optimum conditions for obtaining tetraploid were investigated in raphanobrassica, the intergeneric hybrid between radish (Raphanus sativus) and kale (Brassica oleracea var. acephala) by treating in vitro plants with an anti-mitotic agent, amiprophosmethyl (APM). Initially, no tetraploids but hexaploids and octaploids were induced by the treatments. Although the leaves of these polyploids of raphanobrassica showed chlorosis during subcultures in in vitro conditions, the chlorosis could be successfully prevented by the ethylene inhibitors, both AVG and AgNO₃. Based on this result, AVG was added into medium used for the culture after the chromosome doubling treatment, which subsequently resulted in increased survival rates of the treated plant materials as well as increased production rates of polyploids including tetraploid. These polyploid plants showed obviously different characters from the original diploid plant. The tetraploid plant had bigger sizes in shoot, flower and leaf, and more number of leaves than the diploid. On the other hand, the hexaploid and octaploid plants had smaller sizes in shoots and leaves, and less number of leaves than the diploid. Concentration of glucosinolates, functional substances of Brassicaceae crops, did not significantly differ between diploid and tetraploid of raphanobrassica, but reduced in hexaploid and octaploid.     

Lactobacillus ingluviei C37 from chicken inhibits inflammation in LPS‐stimulated mouse macrophages

Probiotics are growing alternatives to antibiotics, and can contribute to the prevention and treatment of diseases and enhance livestock production. Lactobacillus (L.) ingluviei is a novel probiotic species with growth‐enhancement effects; however, this species remains poorly understood, and there have been (to our knowledge) no studies focusing on its immunological effects. Here, we isolated L. ingluviei C37 (LIC37) from chicken and evaluated the bacterium's immunomodulatory properties to explore its probiotic potential. Real‐time quantitative PCR and ELISA showed that in vitro exposure of inflammation‐stimulated mouse peritoneal macrophages to heat‐killed LIC37 led to decreases in tumor necrosis factor‐α and interleukin (IL)‐6 levels and an increase in IL‐10. These findings suggested that LIC37 exerts anti‐inflammatory effects by modulating cytokine profiles. This species may be an attractive probiotic bacterial strain for use in animal production.     

The canine RAD51 mutation leads to the attenuation of interaction with PALB2

RAD51 forms a complex with BRCA2 and plays a central role in the DNA damage response pathway that is associated with homologous recombination. The structures of RAD51 and its homologues are highly conserved from prokaryotes to higher eukaryotes. Although a large number of BRCA2 mutations have been reported, there are only a few reports on the mutations of RAD51, which have been shown in humans and dogs. However, several mutations of canine RAD51 were identified from mammary gland tumour tissues in a recent study. Some of these mutations seem to have an influence on the homo‐oligomerization or interaction with “Partner and localizer of BRCA2” (PALB2). In this study, we cloned the canine PALB2 homologue and investigated the effect on its interaction with the RAD51 mutants to evaluate the alteration in the function of RAD51 mutants. The A209S and T225S mutants of RAD51 show an attenuation of the interaction between RAD51 and PALB2. These results indicate that the canine RAD51 mutations can potentially alter the homologous recombination pathways in response to DNA damage in dogs.     

Surgical repair of a complete endocardial cushion defect in a dog

Objective: To describe surgical repair of a complete endocardial cushion defect (ECD) in a dog. Study Design: Clinical report. Animal: A 5‐month‐old, 9.2 kg male Shetland sheepdog. Methods: Echocardiographic examination revealed an ostium primum atrial septal defect (ASD), an inlet ventricular septal defect (VSD), mitral regurgitation (MR) and tricuspid regurgitation (TR), and a complete ECD was diagnosed. Surgical correction was performed using cardiopulmonary bypass (CPB) via right atriotomy. A polytetrafluoroethylene (PTFE) patch was secured along the margin of the inlet VSD using simple continuous suture, then the cleft in the septal mitral leaflet was sutured. Similarly, the cleft in the septal tricuspid leaflets was sutured. To complete inlet VSD closure, the VSD patch was secured to these sutured leaflets by simple continuous suture. Another PTFE patch was used to close the ostium primum ASD. Result: After surgery, MR, TR, and interventricular shunting were decreased. The dog was alive 6 years and 5 months after the surgery with no evidence of an interventricular shunt, TR, or other clinical signs. Conclusions: Complete ECD in a dog was corrected using a 2‐patch technique under CPB.     

Dilute acid-soluble phosphorus in fresh air-borne tephras and fixation with an increase in active aluminum and iron

Fresh rhyolite-to-andesite tephras ground to less than 0.15 mm particles contained dilute acid-soluble phosphorus (P) as in the case of cultivated upland soils in Japan. The amount of P determined by Truog extraction (Truog P) ranged between 119 and 784 mg P₂O₅ kg^-1 in 12 rhyolite-to-andesite tephras, and that determined by a modified Bray P₂ extraction method (modified Bray P₂) ranged between 133 and 812 mg P₂O₅ kg^-1. In contrast, the Truog P-content in fresh basaltic andesite-to-basalt tephras was only 3.4–23 mg P₂O₅ kg^-1, and the modified Bray P₂-content was in the range of 41–185 mg P₂O₅ kg^-1, although the total P-content of the two tephra groups was in almost the same range.

Among 12 rhyolite-to-andesite tephras, those from Mt. Usu that erupted in 1977 and from Mt. Pinatubo that erupted in 1991 were selected for detailed studies. Fine particle size fractions of these tephras showed higher Truog P values than the coarse ones. The Truog P values further increased in the heavy fraction with a particle density of 2.8 or greater. In this heavy fraction, apatite was detected by energy dispersive X-ray (EDX) analysis, indicating the contribution of the mineral to the high Truog P. Dilute sulfuric acid treatment of the tephras at 80°C for 15 d followed by neutralization increased the amount of active Al and Fe and decreased the Truog P values of these tephras. These results suggested that the amount of apatite rapidly decreased with weathering in volcanic ash soils.     

Effect of water management on the vivianite content of paddy-rice roots

Abstract

Vivianite is a hydrated ferrous phosphate mineral that can form in reducing environments, and it was recently identified on aged paddy rice (Oryza sativa, L., cultivar Hitomebore) roots. However, the formation and dissolution of vivianite appear highly susceptible to the soil redox potential. We examined the effect of water management on the vivianite content of rice roots in three experimental micro (1 m²) paddy fields. The vivianite content of the roots was estimated using a method based on the alteration of vivianite after heating at 105°C for 48 h. This alteration steeply lowers the dissolution of phosphate from the roots in a mixed acid solution of 0.1 mol L^?1 of hydrochloric acid (HCl) and 1 mol L^?1 of acetic acid (CH₃COOH). Efficiency of the method was confirmed regarding heating temperature and duration of heating. Using this method, we found that water management significantly influenced the vivianite content of the rice roots. The vivianite content of the rice roots was highest, i.e., 2.3 g phosphorus (P) kg^?1 expressed by its estimated P content, when the paddy field was continuously flooded from May to until early September. After flooding stopped, the soil was gradually oxidized, leading to a decrease in vivianite content. In the micro plot exposed to midseason drainage, the vivianite content increased to the level of the continuously flooded plot after reflooding, and finally decreased after flooding was stopped in late August. The plots exposed to midseason drainage followed by intermittent irrigation presented the lowest vivianite contents among the three experimental paddy fields. These results confirm that increases and decreases in the vivianite contents of paddy-rice roots strongly depend on water management.     

Stoichiometry for the decrease in the amount of phosphate-induced negative charges of clay fractions of andisols

Abstract

It is well-known that the amount of negative charges increases with phosphate (P) sorption on soils or soil constituents (Mekaru and Uehara 1972; Schalscha et al. 1972). The increase in the amount of negative charges could be considered as one of the beneficial aspects of P dressing for the retention of cationic nutrients.