Simple prediction of crude protein content in vegetation growing on abandoned cultivated land

The accuracy of two simple methods was compared for the prediction of crude protein (CP) content of above‐ground plant material of mixed‐species composition on abandoned cultivated land in Japan. The first method is based on standard CP values (in g kg^?1 dry matter) for individual species (STV method) as listed in the literature. The second procedure (GLM method) was an application of the generalized linear model using the relative above‐ground biomass of monocots and legumes, total herbage mass, and day of year. Predictions were made at the quadrat scale, and for surveyed sites based on average of values for five or six quadrats in a single survey. A ‘leave‐site‐out’ method was adopted for model validation of the generalized linear model. The observed values of CP content ranged between 21·5 and 161·9 g kg^?1 dry matter (DM). With the STV method, the values of root mean square error (RMSE indicates average estimation error) were 50·9 at the quadrat level and 53·8 at the surveyed‐site level (both g kg^?1 DM). When a ‘leave‐site‐out’ validation was carried out, the RMSE‐values for the GLM method were 23·2 at the quadrat level and 13·2 at the surveyed‐site level (both g kg^?1 DM). We therefore propose adoption of the GLM method for the purpose of estimating the CP content in herbage on abandoned sites.     

Relation between pathogenicity and genetic variation within <Emphasis Type="Italic">Plasmodiophora brassicae</Emphasis>

The relation between diversity of pathogenicity on clubroot-resistant (CR) cultivars of Chinese cabbage (Brassica rapa subsp. pekinensis) bred in Japan and DNA polymorphisms in 17 populations of Plasmodiophora brassicae from cruciferous plants was examined by inoculation tests and random amplified polymorphic DNA (RAPD) analysis using 18 arbitrary primers. Four pathotypes (A–D) were identified after inoculation of six CR cultivars of Chinese cabbage in the 17 populations from cruciferous crops. A relatively high level of genetic diversity was also detected among these populations in the RAPD analysis. Although the four pathotypes could not be clearly differentiated using the RAPD data, most populations of three pathotypes had a consistent location on the dendrogram. All pathotype B (virulent on five cultivars except Utage 70) and D (avirulent on all cultivars) populations, which were common in incompatible interactions with cv. Utage 70, were located in a single subcluster. All five pathotype C populations (virulent only on cv. Utage 70) except for one population grouped in another single subcluster. Because four pathotype A populations (virulent on all six cultivars, races 4 and 9) fell in different subclusters, the populations may be genetically polyphyletic. Populations from cruciferous weed Cardamine flexuosa differed remarkably from those from cruciferous crops in pathogenicity on common cultivars of Chinese cabbage and turnip and C. flexuosa, but they grouped in a single cluster with all race 9 populations from crops. Race 9 populations from crops may thus be closely related to populations from the weed rather than to races 1 and 4 from crops.     

The beneficial effects of horse trekking on autonomic nervous activity in experienced rider with no disability

The aim of this study was to determine whether autonomic nervous activity of a rider with no disability was altered by one practical and applicable horse trekking (HT) exercise. Changes in autonomic nervous activity were analyzed by heart rate variability (HRV). Twenty‐three participants with no disability rode horses along a predetermined HT course at trotting and walking for 60 min. HRV was sampled at 60 min before and immediately, following 60 min, and 120 min after HT. As a control, the same measurements were performed for 22 age‐matched participants during their rest. Only in the HT group, the value of normalized unit in high frequency component (HF nu), an index of parasympathetic nervous activity, was higher at 120 min after treatment than before HT (P < 0.05). The low / high frequency ratio (LF / HF), believed to reflect sympathetic nervous activity, was lower in the HT group than those in the control group at 60 min (P < 0.05) and 120 min after treatment (P < 0.01). These findings suggest that a single HT shifted the autonomic nervous balance of a rider toward parasympathetic dominance. The results obtained by the present study could accelerate the use of horses for human health.     

Involvement of circadian clock in crowing of red jungle fowls (Gallus gallus)

The rhythmic locomotor behavior of flies and mice provides a phenotype for the identification of clock genes, and the underlying molecular mechanism is well studied. However, interestingly, when examining locomotor rhythm in the wild, several key laboratory‐based assumptions on circadian behavior are not supported in natural conditions. The rooster crowing ‘cock‐a‐doodle‐doo’ is a symbol of the break of dawn in many countries. Previously, we used domestic inbred roosters and showed that the timing of roosters' crowing is regulated by the circadian clock under laboratory conditions. However, it is still unknown whether the regulation of crowing by circadian clock is observed under natural conditions. Therefore, here we used red jungle fowls and first confirmed that similar crowing rhythms with domesticated chickens are observed in red jungle fowls under the laboratory conditions. Red jungle fowls show predawn crowing before light onset under 12:12 light : dim light conditions and the free‐running rhythm of crowing under total dim light conditions. We next examined the crowing rhythms under semi‐wild conditions. Although the crowing of red jungle fowls changed seasonally under semi‐wild conditions, predawn crowing was observed before sunrise in all seasons. This evidence suggests that seasonally changed crowing of red jungle fowls is under the control of a circadian clock.     

Comparisons of hyphal growth of Raffaelea quercivora among four Japanese Fagaceae species

Japanese oak wilt causes widespread oak mortality in Japan. Possible differences in susceptibility to the causal fungus, Raffaelea quercivora, may be due to vessel arrangements in host trees. To clarify whether constitutive defence mechanisms including vessel arrangements or induced defence mechanisms are the main determinants of host susceptibility, we inoculated the fungus into living seedlings or sterilized stem segments of four Japanese fagaceous species. In seedlings, water conductance was assessed with dye. In both seedlings and stem segments, hyphal growth was examined by fluorescence microscopy. In seedlings, the area of non‐conductive sapwood in stem cross sections and hyphal growth differed significantly among species. In the susceptible species Quercus crispula and Quercus serrata, hyphal growth was significantly and positively correlated with the proportion of non‐conductive sapwood. In stem segments, hyphal growth was not significantly different among species or between vessel arrangements and was similar to or greater than that in seedlings. These results suggest that the extent of sapwood colonization by R. quercivora could be used as a marker for susceptibility and that susceptibility is determined mainly by induced defence responses.     

A physically based FVM watershed model fully coupling surface and subsurface water flows

A sophisticated modeling approach for simulating-coupled surface and subsurface flows in a watershed is presented. The watershed model developed is a spatially distributed physically based model of composite dimension, consisting of 3-D variably saturated groundwater flow submodel, 2-D overland flow submodel and 1-D river flow submodel. The 3-D subsurface flow is represented by the complete Richards equation, while the 2-D and 1-D surface flows by the diffusive approximations of their complete dynamic equations. For piecewise integration of these equations, the finite volume method (FVM) is employed assuming unknown variables such as the water depth and the pressure head to be volume-averaged state ones. Problem plane geometry is meshed with the unstructured cells of triangular shape which conforms to external as well as internal irregular boundaries such as those between 1-D and 2-D flows. A cell size controlling scheme, referred to as quasi-adaptive meshing scheme, is introduced to keep the local discretization errors caused by topographic elevation gradient even over the entire-meshed geometry. Performance of the model is tested through its practical application to a rugged intermountain watershed. Tuning the values of the three key parameters ensures successful calibration of the model. Once the model is so calibrated, it could reproduce satisfactory runoff response to any rainfall event. Expansion and shrinkage of the contributing area importantly affecting the direct runoff, caused by the vicissitude of rainfall during its total duration, are well reproduced, like what the commonly accepted runoff theory argues. It is thus concluded that the model developed could serve as a powerful watershed simulator usable for investigating and assessing the hydrological aspect of a watershed.     

Antifungal activities of hyoscyamine and scopolamine against two major rice pathogens: <Emphasis Type="Italic">Magnaporthe oryzae</Emphasis> and <Emphasis Type="Italic">Rhizoctonia solani</Emphasis>

The antifungal activities of hyoscyamine and scopolamine, major alkaloids extracted from the desert plant Hyoscyamus muticus, against two rice pathogens, Magnaporthe oryzae and Rhizoctonia solani, were studied. The minimum inhibitory concentration of hyoscyamine that resulted in distinctive inhibition (MIC₅₀) was 1 μg/ml for both fungi. Exposure to hyoscyamine caused the leakage of electrolytes from the mycelia of both fungi. Hyoscyamine (>1 μg/ml) irreversibly delayed or inhibited conidial germination and appressorium formation in M. oryzae grown on polystyrene plates. Hyoscyamine effectively inhibited the attachment of conidia to the surface of rice (Oryza sativa) leaves and inhibited appressorium formation on the leaves. A high concentration of scopolamine (1000 μg/ml) also delayed or inhibited conidial germination in M. oryzae, but conidial germination was restored after washing the conidia with water. Antifungal activity of hyoscyamine was reduced by scopolamine. Magnaporthe oryzae infection was significantly suppressed (by >95%) in leaves of intact rice plants treated with hyoscyamine (10 μg/ml). Moreover, 10 μg hyoscyamine/ml significantly reduced the disease severity index for sheath blight to ≤0.2, when compared with the disease index of control plants (>7.0). Hyoscyamine (>20 μg/ml) completely inhibited sclerotial germination and development of R. solani by delaying the initiation, maturation, and melanization of the sclerotia. These results suggest that tropane alkaloids may be useful for controlling blast and sheath blight diseases of rice and for studying the mechanisms that regulate conidial germination in M. oryzae and sclerotial germination and development in R. solani.     

Choanephora rot of floral tops of <Emphasis Type="Italic">Hyoscyamus muticus</Emphasis> caused by <Emphasis Type="Italic">Choanephora cucurbitarum</Emphasis>

Floral rot of Egyptian henbane (Hyoscyamus muticus L.) was found on potted plants in a greenhouse in Yamaguchi city, Japan, in the late summer of 2008 and 2009. The symptoms were identical to those of rots caused by Choanephora species. The pathogen was isolated and identified as C. cucurbitarum (Berkeley and Ravenel) Thaxter. This new disease was named Choanephora rot (Kougai-kabi-byo) of Egyptian henbane.