Comparison of paddy soil fertility under conventional rice straw application versus cow dung compost application in mixed crop–livestock systems in a cold temperate region of Japan

ABSTRACT

After the rice harvest in Japan, rice straw (RS) is usually cut by combine harvester and incorporated into the soil to improve its fertility. In mixed crop–livestock systems, however, RS is collected and used as livestock feed, and cow dung compost (CDC) is then applied to the soil. This system utilizes the residual organic matter from both rice production and livestock husbandry to make each product. CDC application is also considered to improve the fertility of paddy soil. However, the nutrient input from CDC and the effect of CDC application on soil fertility vary among regions and/or soil types. We compared soil fertility between RS application (RS treatment, avg. 32 years) and RS removal plus CDC application (CDC treatment, avg. 21 years) in 79 paddy fields in Mamurogawa town, Yamagata Prefecture, a cold temperate region of Japan, and measured the nutrient contents in the applied RS and CDC. The total C content of RS was significantly higher than that of CDC, whereas the N, P, K, and Si contents of CDC were significantly higher than those of RS. However, there was no significant difference in paddy soil fertility – as measured by soil organic C, total N, CEC, available N, P, and Si, exchangeable K, Ca, and Mg, base saturation percentage, pH, and bulk density – between the treatments. The soil fertility of most fields was adequate by RS or CDC treatment. Thus, leaving RS in paddy fields or removing it and then adding CDC to the paddy fields has a similar effect in maintaining adequate soil fertility for single rice production or rice–livestock production systems.     

Effect of wounding on cell wall hydrolase activity in tomato fruit

Changes in the activity of the cell wall hydrolases – polygalacturonase (EC 3.2.1.15), pectinesterase (EC 3.2.1.11) and β-galactosidase (EC 3.2.1.23) – have been investigated following wounding of tomato fruit pericarp tissue (Lycopersicon esculentum cv. Ailsa Craig). In ripening fruit wounding appears to arrest the further synthesis of polygalacturonase. β-Galactosidase synthesis may also have been arrested in ripening fruit. The level of pectinesterase declined over the first 24 h following harvest, and since this was apparent in both wounded and unwounded tissue may be related to a harvest, rather than a wounding effect. There was a recovery of activity in intact fruit by 48 h after harvest but this seems to be impaired in wounded tissue. In the case of pectinesterase, this observation was extended to examine the changes in isoform profile and it appeared that the decline of this enzyme may be associated with the reduction of one specific isoform — PE2. In contrast to ripening fruit, wounding of fruit at the fully ripe stage appears to have no significant effects on the activities of any of these three enzymes.     

Culture-based fisheries in small reservoirs in northern Vietnam: effect of stocking density and species combinations

This study was conducted in 20 reservoirs, ranging in size from 4 to 30 ha, in the mountainous, northern region of Vietnam, in ThaiNguyen and YenBai provinces, over two growth cycles in 2002/03 and 2003/04. The reservoirs are leased by farmers for fishery activities from the provincial administration, and the trials were managed by the lessee farmers. Three species combinations in ratios (by fingerling weight) of grass carp: silver carp: bighead carp: common carp: mrigal 1:2:1:1:3 (A), 1:3:1:1:2 (B) and 1:2:1:1:2 (C) were used as seed stock. The overall mean yield of stocked fish in 2002/03 and 2003/04 growth cycles in reservoirs in ThaiNguyen and YenBai provinces was 165 (±21) and 190 (39), and 287 (±22) and 325 (±24) kg ha^?1 respectively. The yield in reservoirs in both provinces, in both growth cycles and irrespective of the species combinations, increased in relation to stocking density. In reservoirs in ThaiNguyen Province, the species combination B gave the lowest yield (both growth cycles and overall), and differed significantly (P<0.05) from combinations A and C. The stocking efficiency (ratio of the yield of stocked fish in kg ha^?1 to the weight of the stocked fish in kg ha^?1) in reservoirs in ThaiNguyen Province ranged from 2.9 to 5.1 over the two growth cycles and that in YenBai from 2.8 to 3.9. There was no discernible trend between growth cycles and/or between species combinations. The major cost incurred was for fingerling procurement. In all instances, a net profit was accrued. The mean (±standard error (SE)) net profit ha^?1 (in 10³VN dong; approximately 15 500 VND=1 US$) was 885 (±270) and 864 (±214), and 1322 (±176) and 1600 (±150) for the growth cycles 2002/03 and 2003/04 for reservoirs in ThaiNguyen and YenBai provinces respectively. Between the two growth cycles, the net profit increased in eight and three reservoirs from YenBai and ThaiNguyen, respectively, the maximum increase being recorded in Khuan Gio (165%) and Dong Man (39%) reservoirs.     

Characterization of a heterodimeric GH2 β-galactosidase from Lactobacillus sakei Lb790 and formation of prebiotic galacto-oligosaccharides

The lacLM genes from Lactobacillus sakei Lb790, encoding a heterodimeric β-galactosidase that belongs to glycoside hydrolase family GH2, were cloned and heterologously expressed in Escherichia coli . Subsequently, the recombinant β-galactosidase LacLM was purified to apparent homogeneity and characterized. The enzyme is a β-galactosidase with narrow substrate specificity because o-nitrophenyl-β-D-galactopyranoside (oNPG) was efficiently hydrolyzed, whereas various structurally related oNP analogues were not. The K(m) and k(cat) values for oNPG and lactose were 0.6 mM and 180 s(-1) and 20 mM and 43 s(-1), respectively. The enzyme is inhibited competitively by its two end-products D-galactose and D-glucose (K(i) values of 180 and 475 mM, respectively). As judged by the ratio of the inhibition constant to the Michaelis constant, K(i)/K(m), this inhibition is only very moderate and much less pronounced than for other microbial β-galactosidases. β-Galactosidase from L. sakei possesses high transgalactosylation activity and was used for the synthesis of galacto-oligosaccharides (GalOS), employing lactose at a concentration of 215 g/L. The maximum GalOS yield was 41% (w/w) of total sugars at 77% lactose conversion and contained mainly non-lactose disaccharides, trisaccharides, and tetrasaccharides with approximately 38, 57, and 5% of total GalOS formed, respectively. The enzyme showed a strong preference for the formation of β-(1→6)-linked transgalactosylation products, whereas β-(1→3)-linked compounds were formed to a lesser extent and β-(1→4)-linked reaction products could not be detected.     

Improvement of porcine oocytes with low developmental ability after fusion of cytoplasmic fragments prepared by serial centrifugation

We have shown in pigs that oocytes denuded of cumulus cells at 24 h of in vitro maturation culture and subsequently matured for a total of 46 h (DO24 oocytes) have lower cytoplasmic maturity than those matured with cumulus cells for 46 h and then denuded (DO46 oocytes). In the present study, DO24 zona-free oocytes were fused with one (1C) or two (2C) cytoplasmic fragments produced by serial centrifugation ("centri-fusion") of DO46 oocytes (DO24+1C and DO24+2C oocytes, respectively). Groups of (1) DO46 (a control), (2) DO24, (3) DO24+1C and (4) DO24+2C oocytes were partheno-activated by an electrical pulse or fertilized in vitro and subsequently cultured for 6 days. In the fused groups, female pronucleus (FPN) formation rates were higher than that in the DO24 group after parthenogenetic activation (PA); however, the blastocyst rates were intermediate between those of the control and DO24 groups. After in vitro fertilization, the male pronucleus (MPN) formation rates in the fused groups were similar to that in the control group and higher than that in the DO24 group; the normal fertilization rate in the DO24+2C group was higher than that in the DO24 group and similar to that in the control group, resulting in significantly higher blastocyst rates in the DO24+2C and control groups than that in the DO24 group. These results suggest that centri-fusion using ooplasm from fully matured DO46 oocytes can offer a potentially novel approach for restoration of cytoplasmic maturity to oocytes with low developmental ability and subsequent improvement of fertilization and developmental competence.     

The effect of ovary storage and in vitro maturation on mRNA levels in bovine oocytes; a possible impact of maternal ATP1A1 on blastocyst development in slaughterhouse-derived oocytes

Since BSE testing of slaughtered cattle is obligatory in Japan, storage of ovaries at 15-20 C overnight in phosphate buffered saline has become a routine protocol in in vitro production (IVP) of cattle embryos. Ovary storage is known to reduce developmental competence of oocytes; however, its effects on oocyte gene expression have not been clarified yet. This study compared oocytes collected from stored slaughterhouse-derived ovaries with those collected by Ovum Pick-Up (OPU) in terms of the expression of 20 selected genes to determine if ovary storage affects cellular processes at the molecular level. Expression of mRNA in oocytes was assayed before and after in vitro maturation (IVM) by real-time quantitative PCR. Maternal mRNA levels of genes were investigated in 2-cell stage embryos obtained from slaughterhouse oocytes to assess their roles for blastocyst formation. In immature OPU oocytes, genes related to metabolism (GAPDH), transporters (GLUT8, ATP1A1) and stress resistance protein (HSP70) showed significantly higher expression compared with oocytes derived from stored ovaries. During IVM, the expression of GDF9, GLUT8, CTNNB1 and PMSB1 was significantly decreased irrespective of oocyte source. Two-cell stage embryos cleaving at 22-25 h after in vitro fertilization (IVF) showed a significantly higher blastocyst formation rate and ATP1A1 gene expression level compared with those cleaving at 27-30 h after IVF. Our results reveal that storage of ovaries alters mRNA levels in oocytes. Correlation of Na/K ATPase ATP1A1 expression in IVP embryos at the 2-cell and 8-cell stages with their developmental ability to the blastocyst stage may suggest the importance of maternal mRNA of this gene during blastulation in embryos derived from slaughterhouse oocytes.     

Molecular epidemiological characterization of poultry red mite, Dermanyssus gallinae,in Japan

Dermanyssus gallinae, the poultry red mite, is an obligatory blood-sucking ectoparasite. The genetic diversity of D. gallinae has been examined in some countries, but so far not in Asian countries. Here, we sequenced a part of the mitochondrial cytochrome oxidase subunit I (COI) and16S rRNA genes and nuclear internal transcribed spacers (ITS) region in 239 mite samples collected from 40 prefectures throughout Japan. The COI and 16S rRNA nucleotide sequences were classified into 28 and 26 haplotypes, respectively. In phylogenetic trees, the haplotypes clustered into 2 haplogroups corresponding to haplogroups A and B, which were previously reported. Haplogroups A and B were further subdivided into sub-haplogroups AJ1 and AJ2, and BJ1 and BJ2, respectively. In both trees, the sequences of haplotypes in AJ1 and BJ2 were relatively distant from those reported in other countries, while some sequences in AJ2 and BJ1 were identical to those in Europe. In addition, the ITS sequences were classified into two sequences, and both sequences were closely related to the sequences found in European countries. These findings indicate a possibility of international oversea transmission of D. gallinae.     

Landscape-scale geographic variations in microbial biomass and enzyme-labile phosphorus in manure-amended Hapludults

Long-term nutrient management practices have lasting effects on the geographic distribution of soil microorganisms, loci of enhanced activity, and non-mobile nutrients such as phosphorus (P) to ultimately influence nutrient use efficiency by crops and edge-of-field losses. We determined the distribution of soil microbial biomass, phosphomonoesterases' activity, and P forms in a 10-ha no-till field that received annual additions of dairy manure at 0, 15, and 30 kg P ha^?1 at the field scale for 16 consecutive years. The spatial structure of soil microbial indices and extractable P fractions were characterized based on their semivariance distributions for each manure treatment. The buildup in soil P occurred, although replacement was done at a crop removal rate. Manure additions resulted in overall mean increases in total labile P of 73 % and 156 % and alterations in the soil microbial ecosystem that depended on manure inorganic-to-enzyme-labile P composition in soils treated with 15 and 30 kg P ha^?1, respectively. Distinct clusters of phosphate- and enzyme-labile organic P were observed within manure treatments, where accumulation of the latter forms was associated with high soil microbial biomass C and reduced acid phosphomonoesterase activity. The geographic variability highlighted the critical need for improving methods of field-scale application of manure and non-mobile nutrients. In addition, current soil testing methods that depend upon composite representative samples for estimating microbiological parameters linked to nutrient turnover and P requirements for optimal crop production should be modified to include site-specificity in sampling and interpretation approaches.     

Field Application Strategies for the Inoculant Biofertilizer Biogro Supplementing Fertilizer Nitrogen Application in Rice Production

Biofertilizer research for rice in Vietnam has focused on the isolation and selection of strains that can fix nitrogen, solubilize inorganic phosphates, stimulate plant growth, and breakdown soil organic matter. This paper assesses the consistent positive effect of BioGro on grain yield and agronomic parameters, including the rates and times for its application, the need for continued inoculation of crops grown in the same site, varietal differences, and nitrogen (N), phosphorus (P), and potassium (K) combinations on the effectiveness of BioGro. The commercial biofertilizer, BioGro, consists of four strains, one formerly considered as nitrogen fixing, Pseudomonas fluorescens, a soil yeast strain, Candida tropicalis is P-solubilizing, and two other bacilli, Bacillus amyloliquefaciens and Bacillus subtilis, potentially breaking down cellulose, protein, and starch. All four strains contribute to plant growth promoting rhizobacteria (PGPR) effect as shown by enhanced root growth. BioGro can be produced in local factories providing there is technical backup in the supply of starter culture and quality control of the final product.     

Factors impacting yields in rain-fed paddies of the lower Mekong River Basin

The Mekong River Basin (MRB) is the biggest basin in Monsoon Asia. About 80% of the agricultural lands, which occupy about 40% of the basin are rain-fed paddy rice area. Therefore, it is assumed that changes in rain-fed paddy rice production affect the total agricultural production to a great degree in the Mekong River Basin. While there are many factors affecting the productivity of rain-fed paddies, such as climate, water use, rice varieties, applications of manure, fertilizer and agro-chemicals, sowing date and other agronomic practices, this paper focuses on the relation between rainfall and yields of rain-fed paddies. Agricultural statistics and rainfall data were collected and analyzed for all 24 provinces in Cambodia for the years 2001 and 2002. Factors such as soil fertility and other natural conditions were removed by comparing the yield and rainfall in one province for different years. Special attention was given to the relation between yields of paddy in the wet season and rainfall, considering factors such as rice varieties, soil fertility, irrigation ratio and the ratio of area damaged by flood, drought, and insect. Although it is not easy to assess those impact factors on yields because they are organically interactive, the following results were obtained: (1) The ratio of high yielding varieties (HYV), soil fertility, and irrigation ratio among many factors that affect yields individually, especially if they are combined, (2) Total rainfall did not have a significant influence on rice yields even for the rain-fed paddies if it was over 700 mm in wet season, and one of the reasons for this would be that there exist supplementary water uses through small ponds and water ponding in local land depressions in and around paddies.