Toxicity of chlorothalonil to marine organisms

We evaluated the acute toxicity of the antifouling biocide 2,4,5,6-tetrachloro-1,3-benzenedicarbonitrile (chlorothalonil, TPN) to an alga (Skeletonema costatum), crustacea (Tigriopus japonicus, kuruma prawn Marsupenaeus japonicus), and a teleost fish (red sea bream Pagrus major) commonly found in the coastal waters of Japan. We also performed acute toxicity and early-life-stage tests for TPN using mummichog Fundulus heteroclitus and used the results to predict the chronic toxicity of TPN to red sea bream. The acute toxicity values of TPN (based on measured concentrations) for S.?costatum, T.?japonicus, M.?japonicus, red sea bream, and mummichog were 0.95, 16, 290, 35, and 61???g/l, respectively. The early-life-stage test with mummichog embryos revealed that hatchability and growth were the most sensitive indicators, and the lowest- and no-observed-effect concentrations, based on the measured concentrations, were 32 and 11???g/l, respectively. We estimated the chronic toxicity value for red sea bream to be 11???g/l based on these toxicity values. Considering the current measured concentrations of TPN in coastal waters of Japan, its environmental impact would appear to be limited.     

The TIR–NBS but not LRR domains of two novel N-like proteins are functionally competent to induce the elicitor p50-dependent hypersensitive response

The tobacco N protein recognizes the helicase domain (p50) of the Tobacco mosaic virus (TMV) replicase as an elicitor and mediates hypersensitive response (HR). We obtained two cDNA clones encoding novel N-like (NL) proteins NL-C26 and NL-B69 from Nicotiana tabacum cv. Samsun NN. NL-C26 and NL-B69 had a Toll-interleukin-1 receptor/nucleotide-binding site/leucine-rich repeat (TIR–NBS–LRR) structure and showed 78% and 73% identities to N, respectively. The NL-C26 and NL-B69 genes were also expressed in N. tabacum cv. Samsun nn, which lacks the N gene. Unlike N, NL-C26 and NL-B69, when coexpressed with p50, failed to induce HR on the sites of agroinfiltration in Samsun nn leaves. However, the elicitor-dependent HR in Samsun nn was induced efficiently by chimeric N proteins with the continuous TIR–NBS domains of NL-C26 and NL-B69. On the other hand, the efficiency of HR induction varied significantly among chimeric N proteins with either of the TIR and NBS domains of the NL proteins. In contrast, chimeras carrying the LRR domains of the NL proteins did not induce HR. Thus, the TIR–NBS domains of NL-C26 and NL-B69 could functionally adapt to the LRR domain of N, which may determine the specificity for the elicitor. We speculate that the NL genes are potential HR-inducing resistance genes for undetermined pathogens other than TMV.     

Grassland degradation reduces the carbon sequestration capacity of the vegetation and enhances the soil carbon and nitrogen loss

Abstract

Grassland degradation not only results in soil degradation and severe decreases in land productivity, but also can promote the emission of soil carbon and nitrogen compounds as greenhouse gases into the atmosphere. The primary objective of this study was to characterize the impact of grassland degradation on carbon and nitrogen budgets in Inner Mongolia, China. We investigated the changes of total carbon, organic carbon, inorganic carbon and total nitrogen that occur in a grassland ecosystem (including vegetation and top 30 cm soil layer) in the course of grassland degradation. Total carbon stored in the grassland ecosystem was reduced by up to 14%, depending on the severity of the degradation. Total nitrogen storage was reduced by almost 10% under severe degradation, but was slightly increased at light and intermediate degradation, indicating that grazing exclusion would not lead to an increase in nitrogen storage in the ecosystem. Over 98% of the total carbon and nitrogen stored in the grassland ecosystem was bound in the soil which provides the dominant and most stable carbon and nitrogen pool in the ecosystem. Most of the soil carbon and nitrogen storage was present in soil water-stable aggregates and was released as soil water-stable aggregates break in the course of grassland degradation. In conclusion, the carbon sequestration capacity of the vegetation decreased significantly, and substantial proportions of soil carbon and nitrogen were lost in the course of grassland degradation, resulting in unbalanced carbon and nitrogen budgets. Strategies to restore degraded grassland must be designed to increase the carbon and nitrogen storage potential of grassland ecosystems.     

Boron Fixation and Its Release in Soils and Bark Compost

Batch studies were conducted to investigate the fixing and release behavior of boron (B) in the soils from Haruo-cho, Kochi, and a bark compost (BC). Boron fixation on river sand (RS) was extremely low. The amount of B fixed was 6.3 mg kg⁻¹ for the greenhouse soil (GS). However, BC showed a 10-fold higher fixation of B (64.1 mg kg⁻¹) compared to GS, indicating that BC here displayed a significant capacity for B trapping. In GS, only around 9% of the adsorbed B was released during a 1-month period of incubation. Bark compost showed the highest amount of release during the incubation period, accounting for 64% of the adsorbed B. Moreover, the ratio of B release increased to 77% in the case of the soil mixed with BC. These results, suggest that different kinds of fixation-releasing mechanisms operate in the soil and BC. The B fixation on soil is considered as specific adsorption on minerals. A possible mechanism for B fixation on BC is ligand exchange. B-diol complexes might be formed with BC, and then after decomposition by microorganisms, they may release B during the incubation period.     

Organic-inorganic hybrid zeolites containing organic frameworks

Organic-inorganic hybrid zeolite materials containing an organic framework have been synthesized by partially superseding a lattice oxygen atom by a methylene group. The use of methylene-bridged organosilane as a silicon source gives zeolite materials containing an organic group as lattice (ZOL), with several zeolitic phases such as the MFI and the LTA structures. Through various characterization methods, the presence of methylene frameworks (Si-CH2-Si) that replace siloxane bonds (Si-O-Si) has been verified, although the Si-C bonds are partly cleaved to give rise to terminal methyl groups. The shape-selective lipophilicity of a ZOL material indicates that it is not a physical mixture of conventional zeolite and amorphous organic-containing material but contains a genuine organic-inorganic hybrid zeolite.     

Estimation of inside-bark diameter and heartwood diameter for Tectona grandis Linn. trees using artificial neural networks

The objective of this study was to obtain neural networks that would precisely estimate inside-bark diameter (d _ib ) and heartwood diameter (d _h ) and compare to the results obtained by the Taper models. The databank was formed so as to eliminate inconsistent and biased data, and stratified: minimum d _ib of 4, 6 and 8 cm and minimum d _h of 10, 15 and 20 cm. The adjusted Taper model used was the Kozak model. For the fitting of artificial neural networks (ANN), tests were performed to identify the independent variables and the database scope level, i.e., the following input variables were tested: diameter at breast height (dbh), total height (H), height at diameter d _ib or d _h (h) and outside-bark diameter at h (d _ob ), bark thickness at 1.3 m and project, and the scope at database level or project level. The estimates obtained by the neural networks and Kozak model were evaluated by residual graphs in function of the respective diameter observed and graph of the observed versus estimated values. ANN were found to be more efficient in estimating inside-bark and heartwood diameters for Tectona grandis trees than the Kozak model. The variables that must be used to fit the networks are dbh, H, h and d _ob . Stratification by project results in precision gain, with precision being higher for wider commercial diameters. Thus, linear-type artificial neural networks can be efficient in describing the taper of Tectona grandis trees.     

Effect of taurine supplementation on hepatic metabolism and alleviation of cadmium toxicity and bioaccumulation in a marine teleost,red sea bream, <Emphasis Type="Italic">Pagrus major</Emphasis>

This study was performed to unravel the mechanism of the beneficial action of taurine on marine teleost fish, red sea bream (Pagrus major), by analyzing the hepatic metabolism. Moreover, the ameliorative effects of the nutrient against cadmium toxicity and bioaccumulation were further evaluated. The fish were fed a diet containing 0 % (TAU0 %), 0.5 % (TAU0.5 %), or 5.0 % (TAU5.0 %) taurine for 40–55 days (d) and subjected to cadmium acute toxicity and bioaccumulation tests. Taurine deficiency in feed severely affected growth and the hepatic metabolic profiles of the fish, including a remarkable increase in myo-inositol, aspartate, and ß-alanine in the TAU0 % group, which indicates a complementary physiological response to taurine deficiency. For the acute toxicity test, fish were fed the test diets for 55 d and were then exposed to different dose of cadmium ranging from 0 to 5.6 mg/L for 96 h. Fish fed taurine had a higher tolerance to cadmium than those not fed taurine. For the bioaccumulation test, fish were fed the test diets for 40 d and then were chronically exposed to 0.2 mg/L of cadmium for 28 d followed by depuration for 21 d. Cadmium concentrations in the liver and muscle of fish fed TAU5.0 % were significantly lower than those of fish fed TAU0 % for the first 7 d of exposure and the first 7 d of elimination. Our findings suggest a possible mechanism for the beneficial role played by taurine and that the inclusion of taurine in fish aquaculture feed may reduce cadmium contamination of fish intended for human consumption.     

Complete sequence analysis of two cryptic plasmids from Bifidobacterium kashiwanohense JCM 15439 (type strain) isolated from healthy infant feces

Bifidobacterial plasmids reported so far are derived from a limited number of strains and plasmids of bifidobacterial type strains isolated from humans are unknown. We found that Bifidobacterium kashiwanohense JCM 15439 (type strain) isolated from a healthy infant contained two cryptic plasmids, designated pBBKW‐1 and pBBKW‐2. We determined and analyzed the complete sequences of both plasmids. pBBKW‐1 (7716 bp) was predicted to replicate by a rolling‐circle mechanism and encode six protein‐coding genes, two of which are putative replication proteins. pBBKW‐1 seems to be a cointegrate plasmid containing two copies of the plasmid pMG1 from Bifidobacterium longum. pBBKW‐2 (2920 bp) was predicted to encode six protein‐coding genes and be a theta‐type replicating plasmid, which has been reported to be more stable than a rolling circle‐type replicating plasmid frequently found in bifidobacteria. Our finding will provide new insights into safe recombinant plasmid constructions for humans.     

Induction of viable gynogenetic progeny using eggs and UV-irradiated sperm from the Chinese tetraploid loach, Misgurnus anguillicaudatus

When eggs from the Chinese tetraploid loach that had 100 chromosomes were fertilized with UV-irradiated sperm, we obtained viable gynogenetic progeny without any additional treatment for the duplication of maternal chromosomes, which survived beyond first feeding towards adult stage of development. Gynogenetic progeny were determined to be diploid since they possessed 50 chromosomes, along with two chromosomes bearing nucleolar organizing regions (NORs), detected by silver nitrate staining (Ag-NORs), chromomycin-A₃ (CMA₃)-positive sites and fluorescence in situ hybridization (FISH) signals for rDNA loci. In contrast, when gynogens were induced using eggs from diploid loach fertilized by UV-irradiated sperm, but without chromosome doubling, we found that all resultant progeny were non-viable haploid gynogens with 25 chromosomes, along with one NOR-bearing chromosome detected by Ag-NORs, CMA₃ and FISH. These observations demonstrate the true genetic tetraploid nature of the Chinese loach possessing 100 chromosomes, and the potential use of this tetraploid as a source of functional diploid gametes for further ploidy manipulation experiments.