Wheat ABA-insensitive mutants result in reduced grain dormancy

This paper describes the isolation of wheat mutants in the hard red spring Scarlet resulting in reduced sensitivity to the plant hormone abscisic acid (ABA) during seed germination. ABA induces seed dormancy during embryo maturation and inhibits the germination of mature seeds. Wheat sensitivity to ABA gradually decreases with dry after-ripening. Scarlet grain normally fails to germinate when fully dormant, shows ABA sensitive germination when partially after-ripened, and becomes ABA insensitive when after-ripened for 8?C12?months. Scarlet ABA-insensitive (ScABI) mutants were isolated based on the ability to germinate on 5???M ABA after only 3?weeks of after-ripening, a condition under which Scarlet would fail to germinate. Six independent seed-specific mutants were recovered. ScABI1, ScABI2, ScABI3 and ScABI4 are able to germinate more efficiently than Scarlet at up to 25???M ABA. The two strongest ABA insensitive lines, ScABI3 and ScABI4, both proved to be partly dominant suggesting that they result from gain-of-function mutations. The ScABI1, ScABI2, ScABI3, ScABI4, and ScABI5 mutants after-ripen more rapidly than Scarlet. Thus, ABA insensitivity is associated with decreased grain dormancy in Scarlet wheat. This suggests that ABA sensitivity is an important factor controlling grain dormancy in wheat, a trait that impacts seedling emergence and pre-harvest sprouting resistance.     

How does the harvest index affect water‐use efficiency and nutrient‐utilization efficiency of sunflowers (Helianthus annuus L.)?

Besides oilseed rape and soybean, sunflower is one of the most important annual oilcrops. Apart from seed yield, which is the most important trait in many crops, oil yield is of utmost interest for sunflower breeders and farmers. Compared to the seed yield of sunflowers, their total biomass is often very high, and it is of great agronomic interest to increase the ratio of both parameters, which is defined as harvest index. With an increase in harvest index, improvements of resource‐use efficiencies can be expected. To generate an adequate seed yield, water and nutrients are key factors and their efficient use becomes increasingly important under conditions of aridity and higher production goals. A pot experiment was conducted in summer 2017 to determine differences in harvest index of various sunflower genotypes which could have an influence on the use efficiencies of water and nutrients (N, P, K). In total, 25 genotypes of different origin and with various morphological traits were investigated under optimal growth conditions. The harvest index varied from 29% to 47% and showed significant differences among some genotypes. The harvest index was less affected by the total biomass of the plants but more by the seed yield. The seed yield itself was mainly determined by the single seed weight rather than by the number of seeds. The experiment also confirmed significant positive correlations between harvest indices and all use efficiencies. Genotypes with high harvest indices were characterized by high oil concentrations in the seeds and particularly by high oil yields. In conclusion, cultivation of sunflower genotypes with high harvest indices most likely results in high water‐use efficiency and high nutrient‐utilization efficiencies as well as in high oil yields.     

Effect of RNF4-SacII gene polymorphism on reproductive traits of Landrace × Large White crossbred sows

The aim of the present study was to investigate whether and to what extent the RNF4-SacII gene polymorphism influences reproduction performances in hyperprolific sow lines. The study involved 101 Landrace x Large White crossbred sows, with 461 records collected on the following reproductive traits: Total Number of piglets Born per litter (TNB), Number of piglets Born Alive per litter (NBA), Number of StillBorn piglets per litter (NSB), piglet Pre-Weaning Mortality (PWM) and Number of piglets at Weaning per litter (NW). The least square method with the GLM procedure in SAS with eight effects was used to pursue the data analysis. Study results revealed that TT homozygotes and TC heterozygotes had a significantly higher (p < .05) NW than CC homozygotes for the life-span performance in all parities and first parity analysed. In the fourth parity analysed, TNB and NBA in TC genotype were significantly higher (p < .05) as compared with TT genotype. Based on the life-span performance, significant effect (p < .05) was recorded for order of parity on TNB, NBA and NW, for farrowing season on TNB and NSB, and for lactation length on PWM. In the second parity, significant effect (p < .05) was recorded for sire of boar on NSB and for gestation length on TNB. Only in the fourth parity, significant effect (p < .05) of RNF4 gene was observed on NBA. There was significant additive effect (p < .05) of the RNF4 gene polymorphism identified on NW in all parities analysed, and significant additive and dominance effects (p < .05) on NSB in the third parity analysed. In conclusion, additional research on related production pig genotypes is necessary to elucidate the effect of RNF4 gene mutation on reproductive traits.     

The role of agro-ecological factors and transboundary transhumance in shaping the genetic diversity in four indigenous cattle populations of Benin

The indigenous cattle population of Benin is a diverse mix of taurine and hybrid breeds shaped by diverse ecological and climatic conditions with eight agro-ecological zones (AEZ). Presumably, the taurine breeds face current endangerment due to ongoing indicine introgression following climate change and transboundary transhumance. The aim of the study was to investigate the genetic diversity and population structure of the indigenous breeds Lagune, Somba, Pabli and Borgou considering spatial agro-ecological and socio-economic factors (transhumance) based on 50k SNP and microsatellite data. Among the four sampled breeds, six genetic clusters were identified using model-free (discriminant analysis of principal components) and model-based (TESS and ADMIXTURE) methods separating taurine from hybrid breeds. Results based on an extension with publicly available historic SNP data sets from taurine and indicine West African cattle and additional outgroups provided additional insight into changes of genetic structure in the sampled breeds over time. Both taurine breeds, Somba and Lagune, showed a stable foundation but also spatially limited partial indicine introgression associated with transhumance leading to high genetic diversity. In addition, we found evidence for spatial diversity and changes in genetic structure over time in the Borgou breed in comparison of our samples with the historic samples which could be explained by potential continuous indicine introgression into the Borgou breed in two sample regions. Results for the Pabli breed do not conclusively point to full absorbance by the Borgou in comparison with all available Borgou samples. Further research is needed in this regard.     

Maternal and direct genetic parameters for tail length,tail lesions,and growth traits in pigs

Tail length and tail lesions are the major triggers for tail biting in pigs. Against this background, 2 datasets were analyzed to estimate genetic parameters for tail characteristics and growth traits. Dataset 1 considered measurements for trait tail length (T-LEN) and for the growth traits birth weight (BW), weaning weight (WW), postweaning weight (PWW), and average daily gain (ADG) from 9,348 piglets. Piglets were born in the period from 2015 to 2018 and kept on the university Gießen research station. Dataset 2 included 4,943 binary observations from 1,648 pigs from the birth years 2016 to 2019 for tail lesions (T-LES) as indicators for nail necrosis, tail abnormalities, or tail biting. T-LES were recorded at 30 ± 7 d after entry for rearing (T-Les-1), at 50 ± 7 d after entry for rearing (end of the rearing period, T-LES-2), and 130 ± 20 d after entry for rearing (end of fattening period, T-LES-3). Genetic statistical model evaluation for dataset 1 based on Akaike’s information criterion and likelihood ration tests suggested multiple-trait animal models considering covariances between direct and maternal genetic effects. The direct heritability for T-LEN was 0.42 (±0.03), indicating the potential for genetic selection on short tails. The maternal genetic heritability for T-LEN was 0.05 (±0.04), indicating the influence of uterine characteristics on morphological traits. The negative correlation between direct and maternal effects for T-LEN of –0.35 (±0.13), as well as the antagonistic relationships (i.e., positive direct genetic correlations in the range from 0.03 to 0.40) between T-LEN with the growth traits BW, WW, PWW, and ADG, complicate selection strategies and breeding goal definitions. The correlations between direct effects for T-LEN and maternal effects for breeding goal traits, and vice versa, were positive but associated with a quite large SE. The heritability for T-LES when considering the 3 repeated measurements was 0.23 (±0.04) from the linear (repeatability of 0.30) and 0.21 (±0.06; repeatability of 0.29) from the threshold model. The breeding value correlations between T-LES-3 with breeding values from the repeatability models were quite large (0.74 to 0.90), suggesting trait lesion recording at the end of the rearing period. To understand all genetic mechanisms in detail, ongoing studies are focusing on association analyses between T-LEN and T-LES, and the identification of tail biting from an actor’s perspective.     

The influence of mineral and organic fertilisers on the growth of the endogeic earthworm Octolasion tyrtaeum (Savigny)

Endogeic earthworms play an important role in mobilisation and stabilisation of carbon and nitrogen in forest and arable soils. Soil organic matter is the major food resource for endogeic earthworms, but little is known about the size and origin of the organic matter pool on which the earthworms actually live. We measured changes in body mass of juvenile endogeic earthworms, Octolasion tyrtaeum (Savigny), in soils with different C and N contents resulting from different fertiliser treatments. The soil was taken from a long-term experiment (Statischer Düngungsversuch, Bad Lauchstädt, Germany). The treatments included (1) non-fertilised soil, (2) NPK fertilised soil, (3) farmyard manure fertilised soil and (4) NPK + farmyard manure fertilised soil. The soil was incubated in microcosms with and without one juvenile O. tyrtaeum for 80 days.Earthworm biomass decreased in non-fertilised soil by 48.6%, in NPK soil by 9.4%, but increased in farmyard manure soil by 19.7% and 42.8% (soil with additional NPK application). In farmyard manure treatments the biomass of bigger individuals decreased, but in smaller individuals it increased. In NPK fertilised soil without farmyard manure only small O. tyrtaeum increased in body mass, whereas in the non-fertilised soil all individuals decreased in body mass. Generally, soil respiration correlated positively with soil carbon content. Earthworms significantly increased soil respiration and nitrogen leaching and this was most pronounced in farmyard manure treatments. Microbial activity was generally higher in farmyard manure soil indicating that farmyard manure increases labile organic matter pools in soil. Also, biomass of earthworms and microorganisms was increased in farmyard manure soil. The presence of earthworms reduced microbial biomass, suggesting that earthworms feed on microorganisms or/and that earthworms and soil microorganisms competed for similar organic matter pools in soil. The results demonstrate that NPK fertilisation only is insufficient to sustain O. tyrtaeum, whereas long-term fertilisation with farmyard manure enables survival of endogeic species due to an increased pool of utilisable soil organic matter in arable soil.     

Vertical distribution and bioavailability of 137Cs in organic and mineral soils

The vertical distribution and bioavailability of ¹³⁷Cs in Histosols and mineral soils with different physicochemical properties from the southeast of Bavaria (Germany) more than ten years after the Chernobyl accident were the focus of this study. The vertical distribution of ¹³⁷Cs was low in the investigated soils. About 85–98 % of the total ¹³⁷Cs was located in the upper 10 cm of the mineral soils. Slightly higher ¹³⁷Cs percentages were observed in deeper soil layers of the peat soils. Although the organic matter is assumed to enhance ¹³⁷Cs mobility in soils, ¹³⁷Cs was also located in the upper 10 cm of the peat soils (73–85 %). The highest ¹³⁷Cs‐activities were found in the humus layers of forest soils, where 45–93 % of the total ¹³⁷Cs soil inventories were observed. To determine the bioavailability of radiocesium, the soil‐to‐plant transfer of ¹³⁷Cs and additionally added ¹³⁴Cs was investigated under controlled conditions. The results revealed that the ^134+137Cs soil‐to‐plant transfer factors as well as the percentages of NH₄‐exchangeable ^134+137Cs were much higher for the peat soils and humus layers than for the mineral soils. Nevertheless, the migration of ¹³⁷Cs from the humus layers to the underlying soils was low. Considering the high bioavailability and low migration of radiocesium in the humus layers, it is suggested that radiocesium is involved in a shortcut element cycle in the system humus layer‐plant uptake‐litter. Furthermore, the organic matter has to be taken into account for radiocesium immobilization.     

Effects of biochar,earthworms, and litter addition on soil microbial activity and abundance in a temperate agricultural soil

Biochar application to arable soils could be effective for soil C sequestration and mitigation of greenhouse gas (GHG) emissions. Soil microorganisms and fauna are the major contributors to GHG emissions from soil, but their interactions with biochar are poorly understood. We investigated the effects of biochar and its interaction with earthworms on soil microbial activity, abundance, and community composition in an incubation experiment with an arable soil with and without N-rich litter addition. After 37 days of incubation, biochar significantly reduced CO₂ (up to 43 %) and N₂O (up to 42 %), as well as NH₄ ⁺-N and NO₃ ^?-N concentrations, compared to the control soils. Concurrently, in the treatments with litter, biochar increased microbial biomass and the soil microbial community composition shifted to higher fungal-to-bacterial ratios. Without litter, all microbial groups were positively affected by biochar × earthworm interactions suggesting better living conditions for soil microorganisms in biochar-containing cast aggregates after the earthworm gut passage. However, assimilation of biochar-C by earthworms was negligible, indicating no direct benefit for the earthworms from biochar uptake. Biochar strongly reduced the metabolic quotient qCO₂ and suppressed the degradation of native SOC, resulting in large negative priming effects (up to 68 %). We conclude that the biochar amendment altered microbial activity, abundance, and community composition, inducing a more efficient microbial community with reduced emissions of CO₂ and N₂O. Earthworms affected soil microorganisms only in the presence of biochar, highlighting the need for further research on the interactions of biochar with soil fauna.