Influence of Wildland Fire Along a Successional Gradient in Sagebrush Steppe and Western Juniper Woodlands

Western juniper (Juniperus occidentalis Hook. var. occidentalis) has been expanding into sagebrush (ArtemisiaL. spp.) steppe over the past 130 yr in Idaho, Oregon, and California. Fuel characteristics and expected fire behavior and effects change as sagebrush steppe transitions into juniper woodlands. Little is currently known about how wildfire influences burn severity and ecosystem response in steppe altered by woodland conversion. In 2007, the Tongue-Crutcher Wildland Fire burned 18890 ha along a successional gradient ranging from sagebrush steppe to mature juniper woodlands, providing a unique opportunity to evaluate the effects of prefire vegetation on burn severity and ecosystem response across spatial scales. Plot-scale burn severity was evaluated with the composite burn index (CBI) in locations where prefire vegetation data were available, and landscape-scale burn severity was estimated via remotely sensed indices (differenced normalized burn ratio [dNBR] and relative differenced normalized burn ratio [RdNBR]). Strong positive relationships exist between CBI and remotely sensed burn severity indices in woodlands, whereas the relationships are weaker in steppe vegetation. Woodlands in late structural development phases, and sagebrush patches near developed woodlands, incurred higher burn severity than steppe and young woodlands. The results support the idea that a threshold exists for when juniper-encroached sagebrush steppe becomes difficult to restore. Implications for fire management in sagebrush/juniper ecosystems are discussed.     

Use of random regression model as an alternative for multibreed relationship matrix

A random regression model is presented as an approximation for multibreed variance model. The approximation is derived using the splitted multibreed model where the single breeding value is split to the breed specific and their segregation terms. The random regression model allows extending the multibreed information easily to genomic data models. We present the approach by a simple example.     

Genetic parameters of pelt character,feed efficiency and size traits in Finnish blue fox (Vulpes lagopus)

Pelt character traits (size, quality, colour clarity, darkness) are important economic traits in blue fox breeding. Better feed efficiency (FE) is another economically important and new breeding goal for fur animals. The purpose of this study was to determine the correlations between pelt character traits, FE and size traits and to estimate genetic parameters for pelt character traits. Pelt size (pSI_cm) had a high positive genetic correlation with animal grading size (gSI), final body weight (BW_Fin), body length and daily gain (DG), and a moderate correlation with body condition score (BCS). Animal body length and BCS (describing fatness) were considered as genetically different traits. Genetic correlations between pelt quality and size traits were estimated without precision and did not differ from zero, but colour clarity (pCL) had a low antagonistic genetic correlation with FE. Pelt size and DG had a favourable genetic correlation with FE but a fairly high unfavourable genetic correlation with dry matter feed intake. The current emphasis on selection for larger animal and pelt size improves FE indirectly, but selection for larger pelt size favours fast‐growing and fat individuals and simultaneously increases feed intake. The detected genetic connections between FE, size, feed intake and pCL should be taken into account in the Finnish blue fox breeding programme.     

Across breed multi‐trait random regression genomic predictions in the Nordic Red dairy cattle

The current study evaluates reliability of genomic predictions in selection candidates using multi‐trait random regression model, which accounts for interactions between marker effects and breed of origin in the Nordic Red dairy cattle (RDC). The population structure of the RDC is admixed. Data consisted of individual animal breed proportions calculated from the full pedigree, deregressed proofs (DRP) of published estimated breeding values (EBV) for yield traits and genotypic data for 37 595 single nucleotide polymorphic markers. The analysed data included 3330 bulls in the reference population and 812 bulls that were used for validation. Direct genomic breeding values (DGV) were estimated using the model under study, which accounts for breed effects and also with GBLUP, which assume uniform population. Validation reliability was calculated as a coefficient of determination from weighted regression of DRP on DGV (), scaled by the mean reliability of DRP. Using the breed‐specific model increased the reliability of DGV by 2 and 3% for milk and protein, respectively, when compared to homogeneous population GBLUP. The exception was for fat, where there was no gain in reliability. Estimated validation reliabilities were low for milk (0.32) and protein (0.32) and slightly higher (0.42) for fat.     

Leaf litter fall and litter decomposition under Eucalyptus and coniferous plantations in Gambo District,southern Ethiopia

Abstract

Litter fall and its decomposition rate play an important role in nutrient recycling, carbon budgeting and in sustaining soil productivity. Litter production and the decomposition rate were studied on commonly planted broad-leaved Eucalyptus (Eucalyptus globulus, Eucalyptus camaldulensis, Eucalyptus saligna) and coniferous (Juniperus procera, Cupressus lusitanica, Pinus patula) plantation species and compared with the adjacent broad-leaved natural forest. The production of litter was recorded by litter traps and the decomposition rate was studied by nylon net bag technique. Litter production under broad-leaved plantation species and natural forest (that varied from 9.7 to 12.6 Mg ha^?1 y^?1) was significantly higher (p<0.05) than that under coniferous species (that varied from 4.9 to 6.6 Mg ha^?1 y^?1). The average concentration of C and N in fresh mature leaves was higher than in leaf-litter fall, implying that both C and N were either sorbed in the plant system or lost through decomposition, leaching or erosion during the leaf-litter fall period. The amount of N, which potentially returned to the soil through the leaf-litter fall, tended to be higher in natural forest than in Eucalyptus plantations. The residual litter mass in the litter bag declined with time for all species. The annual dry matter decay constant (k) varied from 0.07 m^?1 in Pinus patula to 0.12 m^?1 in Eucalyptus saligna. The half-time (t_0.5) decay varied from 6.0 for Eucalyptus saligna to 9.7 months for Pinus patula. The results suggest that the decomposition rate in Pinus patula was relatively lower than the other species and the litter production under broad-leaved Eucalyptus was comparatively higher than that in coniferous species. Overall the litter decomposition was fast for all species. The higher litter production and its relative faster rate of decomposition is a positive aspect to be considered during species selection for the restoration of degraded habitats given other judicious management practices such as prolonging the rotation period are adhered to.     

Influence of model specifications on the reliabilities of genomic prediction in a Swedish-Finnish red breed cattle population

Using a combined multi‐breed reference population, this study explored the influence of model specification and the effect of including a polygenic effect on the reliability of genomic breeding values (DGV and GEBV). The combined reference population consisted of 2986 Swedish Red Breed (SRB) and Finnish Ayrshire (FAY) dairy cattle. Bayesian methodology (common prior and mixture models with different prior distribution settings for the marker effects) as well as a best linear unbiased prediction with a genomic relationship matrix [genomic best linear unbiased predictor (GBLUP)] was used in the prediction of DGV. Mixture models including a polygenic effect were used to predict GEBV. In total, five traits with low, high and medium heritability were analysed. For the models using a mixture prior distribution, reliabilities of DGV tended to decrease with an increasing proportion of markers with small effects. The influence of the inclusion of a polygenic effect on the reliability of DGV varied across traits and model specifications. Average correlation between DGV with the Mendelian sampling term, across traits, was highest (R² = 0.25) for the GBLUP model and decreased with increasing proportion of markers with large effects. Reliabilities increased when DGV and parent average information were combined in an index. The GBLUP model with the largest gain across traits in the reliability of the index achieved the highest DGV mean reliability. However, the polygenic models showed to be less biased and more consistent in the estimation of DGV regardless of the model specifications compared with the mixture models without the polygenic effect.     

Relative prevalence of upper respiratory tract obstructive disorders in two breeds of harness racehorses (185 cases: 1998-2006)

Reasons for performing study: Two genetically and phenotypically distinct horse breeds are used for harness racing in Scandinavia: the Standardbred (SB) and Coldblooded Trotter. These racehorses have identical environmental, management and racing conditions. Therefore, this study was undertaken to identify and compare the relative prevalence of upper respiratory tract (URT) obstructive disorders in these 2 breeds. Objectives: To determine whether these 2 phenotypically different breeds of harness racehorses have different predispositions for URT disorders. Methods: Retrospective study of 88 Norwegian Coldblooded Trotters (NCT) and 97 SBs referred to this hospital for URT evaluation between 1998 and 2006. Case records of all horses diagnosed with an URT disorder during resting endoscopy, and all horses undergoing high‐speed treadmill videoendoscopy (HSTV) with one or more periods of induced poll flexion were evaluated. The relative prevalence of URT disorders between the 2 breeds was analysed using a Fisher's exact test. Results: There was a significant (P<0.05) breed predisposition regarding 6 URT disorders. Bilateral dynamic laryngeal collapse associated with poll flexion and flaccid epiglottis was significantly more frequent in the NCT. Alar fold collapse and nasopharyngeal collapse were significantly more frequent in SBs. Epiglottic entrapment and nasal flutter were only diagnosed in the SBs. Dynamic disorders were more common than resting disorders in both breeds. Conclusion: URT obstructive disorders (dynamic laryngeal collapse associated with poll flexion, flaccid epiglottis, pharyngeal collapse, alar fold collapse, nasal flutter and epiglottic entrapment) are breed related, indicating an anatomic or functional cause. Periods of induced poll flexion during HSTV was essential to declare harness racehorses free of URT disorders. Potential relevance: Further anatomic or physiological studies comparing these breeds could potentially provide insight into the pathogenesis of certain URT obstructive disorders. Induced poll flexion should be included in routine HSTV examinations of all harness racehorses.     

Evaluation of the stable fly (Stomoxys calcitrans) as a vector of enzootic bovine leukosis

Experiments reported here were directed at 2 questions: (1) Can the stable fly (Stomoxys calcitrans) transmit enzootic bovine leukosis? (2) Could early viremia augment the probability of transmission by this insect? In one vector experiment, calves and bovine leukemia virus (BLV)-infected cows were housed with and without stable flies. The calves were monitored serologically during a 3-month postexposure period, using the agar gel immunodiffusion test. All fly-infested and fly-free calves remained BLV-seronegative. For a second vector experiment, donor calves, newly injected with blood from BLV-infected cows with high virus expression, were tethered alternately between uninoculated, weaned BLV-seronegative calves. These groups were housed with or without flies in 2 replicate trials. The inoculated calves from the first replicate seroconverted at 16 and 23 days after inoculation; the inoculated calves from the second replicate seroconverted at 11, 16, 16, and 37 days after inoculation. All uninoculated calves remained BLV-seronegative. In a manual transmission experiment, 50 unfed stable flies were allowed to complete a meal on each of 3 BLV-seronegative calves after feeding on a BLV-seropositive cow with high (42%) virus expression. One control calf was injected with blood from the cow. Seroconversion occurred in the control calf and 1 calf on which flies were given access. A scanning electron microscopic study was made of the everted and closed mouth parts of the stable fly. Given the lymphocyte count in blood from the cow used in the manual vector transmission experiment, it was calculated that 3,950 mouth part volumes would be necessary to transmit BLV.(ABSTRACT TRUNCATED AT 250 WORDS)     

Latitudinally distinct stocks of Atlantic cod face fundamentally different biophysical challenges under on-going climate change

The reproductive success of marine ectotherms is especially vulnerable in warming oceans due to alterations in adult physiology, as well as embryonic and larval survival prospects. These vital responses may, however, differ considerably across the species' geographical distribution. Here we investigated the life history, focusing on reproductive ecology, of three spatially distant populations (stocks) of Atlantic cod (Gadus morhua, Gadidae) (50–80° N), in the Irish/Celtic Seas-English Channel Complex, North and Barents Seas, under past and projected climate. First, experimental tracking of spawning behaviour evidenced that the ovulation cycle is highly distressed at ≥9.6 (±0.25)°C (T_up). This knife-edge threshold resulted in erratic spawning frequencies, whereas vitellogenin sequestration remained unaffected, indicating endocrine rather than aerobic scope constraints. Cod in the Celtic Sea-English Channel are, therefore, expected to show critical stock depensation over the next decades as spawning grounds warm above T_up, with Irish Sea cod subsequently at risk. Second, in the relatively cooler North Sea, the northward retraction of Calanus finmarchicus (Calanidae) and Para-Pseudocalanus spp. (Clausocalanidae) (1958–2017) limit cod larvae feeding opportunities, particularly in the southernmost subarea. However, the contrasting increase in Calanus helgolandicus (Calanidae) does not counteract this negative effect, likely because cod larvae hatch ahead of its abundance peaks. Overfishing again comes as a twin effect. Third, in the still relatively cold Barents Sea, the sustainably harvested cod benefit from improved food conditions in the recent ice-free polar region but at the energetic cost of lengthier and faster spawning migrations. Consequently, under climate change local stocks are stressed by different mechanistic factors of varying management severity.