The ecological role of bivalve shellfish aquaculture in the estuarine environment: A review with application to oyster and clam culture in West Coast (USA) estuaries

Aquaculture is viewed as a potential mechanism to meet the growing demand for seafood around the world. The future of bivalve shellfish aquaculture in the U.S. hinges on sustainable practices on the part of industry and a more consistent regulatory regime. Bivalve shellfish aquaculture is a recent practice relative to its history in other countries, beginning in the late 1800s along the U.S. West Coast where it is now well established with farm raised product utilizing land-based hatcheries and grow-out directly in numerous estuaries. Bivalve shellfish aquaculture can be viewed as a disturbance which modifies the estuarine system in three ways: 1) changes in material processes — bivalves process food and produce wastes; 2) addition of physical structure — aquaculture introduces the cultured organisms and in some cases a physical anchoring structure; and 3) pulse disturbances like harvest and bed maintenance disturb sediments, remove species in addition to the cultured organisms themselves, and change resource or habitat availability. In U.S. West Coast estuaries, water column and sediment nutrient concentrations are relatively high and influenced by large tidal exchange and proximity to deeper nearshore ocean waters where upwelling controls production during summer months. Bivalves are unlikely to influence material processes except at local bed scales in these systems, although estuary-wide effects could appear as the fraction of cultured area rises or in poorly flushed bays. Bivalve culture clearly modifies estuarine habitat at local community and at landscape scales and effects are most often evaluated against existing structured habitat in the form of submerged aquatic vegetation. Individual activities act as pulse disturbances and the recovery of eelgrass (Zostera marina) to pre-disturbance levels is variable (< 2 to > 5 years). The extent of disturbance depends on the aquaculture practice and the distribution of eelgrass reflects a balance of space competition, pulse disturbance and recovery, and is therefore at dynamic equilibrium on aquaculture beds. Structure provided by aquaculture appears functionally similar to eelgrass for small benthic infauna and mobile epibenthic fauna while use of aquaculture as habitat by larger more mobile invertebrates and fish depends on mobility and varies with life-history stage and taxon being evaluated. Scale seems a very important management consideration and further research at estuarine landscape scales, especially for habitat use by important invertebrates and fish, may prove useful in designing and implementing best management practices. Though local and short term effects from aquaculture are clearly evident in U.S. West Coast estuaries, bivalve aquaculture does not remove area from the estuary or degrade water quality like other anthropogenic influences, and thus has not been implicated in shifts to alternate states or reduced adaptive capacity of the larger ecological system.     

Turbine entrainment and passage of potadromous fish through hydropower dams: Developing conceptual frameworks and metrics for moving beyond turbine passage mortality

Potadromous fishes are vulnerable to involuntary entrainment through hydropower turbines. However, turbines can also provide a downstream passage route for potadromous fish. Here, we review evidence for turbine entrainment and passage in potadromous fish, and evaluate the effects of these processes on upstream and downstream populations. We develop conceptual frameworks and metrics to quantify vulnerability to turbine entrainment removals, and to quantify the efficiency of turbines as a downstream passage route. We highlight factors that influence these processes and provide case‐studies demonstrating their applicability. We found that juvenile potadromous fish are being entrained through turbines at rates high enough to impact upstream populations. Given that juvenile passage survival is often high, we argue that turbines provide an important downstream passage route for potadromous fish. We show that entrainment vulnerability is likely a function of interactions between in‐reservoir fish behaviour, habitat configuration and operations and thus not well captured by passage mortality estimates. Similarly, we show that while passage mortality can limit downstream passage efficiency, passage success is also dependent on reservoir and forebay navigation, along with survival and fitness in the downstream river. We advocate for a shift in focus away from estimates of passage mortality and injury, which have previously accounted for the majority of turbine passage research. Instead, we recommend an approach that focusses on quantification of the factors that influence downstream passage efficiency and entrainment vulnerability. Moreover, we highlight the need to better understand the broader scale impacts of these events on upstream and downstream populations.     

Stewardship and management of freshwater ecosystems: From Leopold's land ethic to a freshwater ethic

1. In 1949, Aldo Leopold formalized the concept of the ‘land ethic’, in what emerged as a foundational and transformational way of thinking about natural resource management, biodiversity conservation, and stewardship in terrestrial systems. Yet, the land ethic has inherent linkages to aquatic ecosystems; Leopold himself conducted research on rivers and lakes, and freshwater ecosystems figured widely in his writing.
2. We reflect on the land ethic and other aspects of Leopold's scholarship to identify key messages that provide insight into the stewardship and management of freshwater ecosystems around the globe. We also frame what we call the ‘freshwater ethic’ around Leopold's legacy. Although Leopold could not have envisaged the stressors affecting modern aquatic ecosystems, his core principles remain salient. These apply not only to ecosystem protection, but also to the ethics of modern conservation economics, sustainability, and the protection of natural capital, in which lakes, rivers, and wetlands now figure prominently.
3. We identify key ‘Aldo-inspired’ recommendations for protecting and restoring freshwater ecosystems in the Anthropocene that emanate directly from his writings (e.g. adopt an ecosystem approach, identify win–win–win scenarios, recognize the irreplaceability of wild waters, and strive for freshwater optimism).
4. In an epoch where links between people and nature are becoming more explicit in environmental management, policy, and governance, we suggest that Aldo Leopold's work illustrates how inspirational, seminal thinkers have offered leadership in this domain. We contend that today there is still much that can be learned from Leopold, especially by the next generation of environmental practitioners, to ensure the effective stewardship of our aquatic ecosystems.
5. We submit that the adoption of a freshwater ethic in parallel with Leopold's land ethic will enhance the stewardship of the world's increasingly threatened fresh waters by raising the profile of the plight of fresh waters and identifying enduring actions that, if embraced, will help conserve and restore biodiversity.

     

Nanominerals, mineral nanoparticles, and Earth systems

Minerals are more complex than previously thought because of the discovery that their chemical properties vary as a function of particle size when smaller, in at least one dimension, than a few nanometers, to perhaps as much as several tens of nanometers. These variations are most likely due, at least in part, to differences in surface and near-surface atomic structure, as well as crystal shape and surface topography as a function of size in this smallest of size regimes. It has now been established that these variations may make a difference in important geochemical and biogeochemical reactions and kinetics. This recognition is broadening and enriching our view of how minerals influence the hydrosphere, pedosphere, biosphere, and atmosphere.     

Aerobic microbial respiration in 86-million-year-old deep-sea red clay

Microbial communities can subsist at depth in marine sediments without fresh supply of organic matter for millions of years. At threshold sedimentation rates of 1 millimeter per 1000 years, the low rates of microbial community metabolism in the North Pacific Gyre allow sediments to remain oxygenated tens of meters below the sea floor. We found that the oxygen respiration rates dropped from 10 micromoles of O(2) liter(-1) year(-1) near the sediment-water interface to 0.001 micromoles of O(2) liter(-1) year(-1) at 30-meter depth within 86 million-year-old sediment. The cell-specific respiration rate decreased with depth but stabilized at around 10(-3) femtomoles of O(2) cell(-1) day(-1) 10 meters below the seafloor. This result indicated that the community size is controlled by the rate of carbon oxidation and thereby by the low available energy flux.     

Density stratification in ionically enriched Onondaga lake,U.S.A.

Denstity stratification was characterized in ionically enriched Onondaga Lake for a 7 mo period of 1980, based on paired profiles of temperature and cloride collected at 1 m depth intervals from a single deep water location on 54 different occasions. The lake was both thermally and chemically stratified. The chemical component represented 38.5% of the density stratification for the study period. It was most often the dominant component in establishing the depth of the upper mixed layer, which was unusually shallow in the lake. Further, the presense of the chemical component prolonged the stratification period. The chemical component of stratification decreased progressively through the study. The altered stratification characteristics of the lake may have negative effects on the level of biomass in the upper waters and the oxygen resources of the lower waters.     

Observation of polymer conformation hysteresis in extensional flow

Highly extensible Escherichia coli DNA molecules in planar extensional flow were visualized in dilute solution by fluorescence microscopy. For a narrow range of flow strengths, the molecules were found in either a coiled or highly extended conformation, depending on the deformation history of the polymer. This conformation hysteresis persists for many polymer relaxation times and is due to conformation-dependent hydrodynamic forces. Polymer conformational free-energy landscapes were calculated from computer simulations and show two free-energy minima for flow strengths near the coil-stretch transition. Hysteresis cycles may directly influence bulk-solution stresses and the development of stress-strain relations for dilute polymer flows.     

Isoflavone profile and biological activity of soy bread

The present study examines the ability of isoflavone extracts from whole soy bread and two soy bread fractions, crumb and crust, to modulate the proliferation of human prostate cancer PC-3 cells. Total isoflavone content in the two fractions of soy bread were similar (3.17 micromol/g dry basis). However, their conjugate patterns were altered. Both fractions of soy bread contained a similar level of isoflavone aglycones ( approximately 24%). Low concentrations of soy bread extracts increased PC-3 cell proliferation as much as 47% compared to untreated control. This proliferative effect in cell growth was reduced at higher extract concentration. Soy bread crust extract (10 mg/mL) reduced PC-3 cell proliferation by 15% compared to untreated control. Interestingly, wheat bread extracts increased cell proliferation at all concentrations tested. Although extracts from both breads possessed biological activity, only soy bread crust extract reduced PC-3 cell proliferation. This observation may be related to the presence of soy in this bread.     

Growth, survival and fillet composition of paddlefish, Polyodon spathula (Walbaum) fed commercial trout or catfish feeds

Paddlefish are gaining increasing acceptance as an aquaculture species worldwide. Commercial trout feeds, containing high protein and lipid levels, are currently used in intensive culture; however, nutritional requirements of paddlefish are not currently known. A study was conducted examining the effects on growth, survival and fillet composition of juvenile paddlefish when fed commercial feeds differing in protein and lipid levels. Paddlefish larvae were first stocked in 14.0 m³ round tanks and fed trout starter feeds for 43 days until trained to accept a 1.6 mm pellet. Paddlefish juveniles of mean weight (±SE) 20±0.27 g were randomly stocked into six0.02 ha ponds at 12 500 ha^?1 and fed floating commercial trout or catfish (lower protein and lipid) feeds, twice daily (08:00 and 15:30 hours) for 92–97 days. At harvest, there were no significant differences in final weight, percent survival, specific growth rate , relative growth and feed conversion ratio between treatments, which averaged 223.6 g, 96.2%, 2.5% day^?1, 10.2 and 1.98 respectively. Surface feeding activity index was significantly higher in ponds supplied with catfish feed than in ponds supplied with trout feeds. Relative pellet buoyancy was not a factor in feeding activity. Fulton's condition factor averaged0.238, was not significantly different, and was similar to a reported value for extensively cultured paddlefish (zooplanktivore). There was no significant difference in liver somatic index between treatments, which averaged 1.91%. Percent protein and moisture of fillets averaged 14.9% and 80.9%, respectively, and were not significantly different between treatments. However, lipid content of fillets was significantly higher in paddlefish fed the trout feed (4.45%), compared with paddlefish fed the catfish feed (2.42%). Fillet lipid content for both treatments was higher than reported values for extensively cultured paddlefish. Percent abdominal fat was significantly higher (0.82%) in paddlefish fed the trout feed compared with paddlefish fed the catfish feed (0.52%). Results from this study indicate that paddlefish can be fed a commercial catfish feed labeled to contain 32% protein and 4.5% lipid without adverse effects on growth, survival and fillet composition, lowering production costs.