Evolution of mammals and their gut microbes

Mammals are metagenomic in that they are composed of not only their own gene complements but also those of all of their associated microbes. To understand the coevolution of the mammals and their indigenous microbial communities, we conducted a network-based analysis of bacterial 16S ribosomal RNA gene sequences from the fecal microbiota of humans and 59 other mammalian species living in two zoos and in the wild. The results indicate that host diet and phylogeny both influence bacterial diversity, which increases from carnivory to omnivory to herbivory; that bacterial communities codiversified with their hosts; and that the gut microbiota of humans living a modern life-style is typical of omnivorous primates.     

Comment on "Global correlations in tropical tree species richness and abundance reject neutrality"

Ricklefs and Renner (Reports, 27 January 2012, p. 464) showed correlations of species richness and individual abundance within families across continents and claimed that neutral theory predicts no such correlation. However, they did not substantiate this claim quantitatively with a neutral model. Here, we show that neutral theory can be consistent with these correlations and, consequently, that the correlations alone cannot reject neutrality.     

Dynamics of the hippocampus during encoding and retrieval of face-name pairs

The medial temporal lobe (MTL) is critical in forming new memories, but how subregions within the MTL carry out encoding and retrieval processes in humans is unknown. Using new high-resolution functional magnetic resonance imaging (fMRI) acquisition and analysis methods, we identified mnemonic properties of different subregions within the hippocampal circuitry as human subjects learned to associate names with faces. The cornu ammonis (CA) fields 2 and 3 and the dentate gyrus were active relative to baseline only during encoding, and this activity decreased as associations were learned. Activity in the subiculum showed the same temporal decline, but primarily during retrieval. Our results demonstrate that subdivisions within the hippocampus make distinct contributions to new memory formation.     

Valvular endocarditis associated with Helcococcus ovis infection in a bovine.

A 12-month-old Angus bull calf with a history of fever and lethargy of several weeks' duration was necropsied. Macroscopic findings included general dehydration, congestion, and edema within the craniodorsal lobes of the lung, multifocal ecchymotic hemorrhages on the dorsal epaxial and gluteal muscles, bloody ingesta within the gastrointestinal tract, and a 4- x 4- x 5-cm irregular plaque located on the right atrioventricular heart valve. Microscopically, there were focally extensive pulmonary alveolar infiltrates of histiocytes and neutrophils, large numbers of necrotic hypereosinophilic hepatocytes located within the centrilobular and midzonal regions of the liver, and, within the plaque from the right atrioventricular valve, a large mass formed by abundant laminated fibrin that contained numerous small multifocal aggregates of gram-positive cocci. This report describes the first apparent isolation of Helcococcus ovis from cattle.     

Renal Clearance, Urinary Excretion of Endogenous Substances, and Urinary Diagnostic Indices in Healthy Neonatal Foals

Urine (U) and serum (S) were obtained every 2 hours during a 12- or 24-hour period from eight healthy 96-hour-old pony or horse foals. Dams' milk samples were obtained concurrently. Urine volume was measured during this 12- or 24-hour period. The mean amount of urine produced was 148 +/- 20 ml/kg/day. Baseline urinalyses were evaluated on all foals at two days of age, before any manipulation. Urine generally was dilute (less than 1.008) but the specific gravity was as high as 1.027 in one normal foal. Continuous (12 or 24 hour) urinary catheterization resulted in bacteriuria but not white blood cells in the urine. Prolonged catheterization did not cause foals to become febrile or exhibit clinical signs of cystitis or other illness. Urinary electrolyte excretion, urinary electrolyte clearances, and fractional electrolyte excretions (FE) were measured. When compared with normal values reported in adult horses, excretion, clearance, and FE were similar for sodium (Na) but higher for potassium (K), phosphorus (P), and calcium (Ca). There were no significant differences between data collected during different time periods, and it was concluded that the use of single sample urine/serum estimates of fractional excretion in the neonatal foal was an appropriate indicator of the renal handling of electrolytes, and when viewed in conjunction with urinalysis and other serum parameters, a valuable aid to evaluating renal function.     

Flowering and fruiting in ‘Patterson’ apricot (Prunus armeniaca) in response to postharvest application of gibberellic acid

In July or August of 1988 and 1989 which was approximately 2 or 6 weeks, respectively, after fruit harvest, cultivar ‘Patterson’ apricot (Prunus armeniaca) trees were sprayed with a single spray of either 10, 50 or 100 p.p.m. gibberellic acid (gibberellin A₃, GA). GA sprays of 100 p.p.m. applied in early July reduced flower number per centimeter of limb length in the year following treatment. Flower number per centimeter of limb circumference was reduced by sprays of 50 and 100 p.p.m. GA applied in July. Fruit set was not affected by GA sprays. The yield and fruit number of hand thinned trees was equivalent to that found on trees treated with 50 and 100 p.p.m. GA sprays in July. Individual fruit weight (size) was increased by GA sprays of 50 and 100 p.p.m. in July compared to hand thinned trees. Fruit maturity was advanced when yields were reduced by GA sprays. In July, GA sprays of 10 p.p.m. resulted in increased individual fruit weight without reduced total yields per tree compared to non-thinned control trees. Results showed that the use of GA sprays the year before flowering (July) decreased flower numbers, eliminating the need for chemical or hand fruit thinning of ‘Patterson’ apricot.