Purification and characterization of ferulic acid esterase from malted finger millet (Eleusine coracana, Indaf-15)

Ferulic acid esterase (EC 3.1.1.73) cleaves the feruloyl groups substituted at the 5'-OH group of arabinosyl residues of arabinoxylans and is known to modulate their functional properties. In this study, ferulic acid esterase from 96 h finger millet malt was purified to apparent homogeneity by three-step purification with a recovery of 3% and a fold purification of 22. The substrate p-nitrophenylferulate (PNPF) was synthesized and used to assay this enzyme spectrophotometrically. The products liberated from ragi and wheat water-soluble polysaccharides by the action of purified ragi ferulic acid esterase were identified by ESI-MS. The pH and temperature optima of the enzyme were found to be 6.0 and 45 degrees C, respectively. The pH and temperature stabilities of the enzyme were found to be in the range of 5.5-9.0 and 30 degrees C, respectively. The activation energy of the enzymatic reaction was found to be 4.08 kJ mol(-1). The apparent K m and V max of the purified ferulic acid esterase for PNPF were 0.053 microM and 0.085 unit mL(-1), respectively. The enzyme is a monomer with a molecular mass of 16.5 kDa. Metal ions such as Ni(2+), Zn(2+), Co(2+), and Cu(2+) and oxalic and citric acids enhanced the enzyme activity. The enzyme was completely inhibited by Fe(3+). Group specific reagents such as p-chloromercuric benzoate and iodoacetamide inhibited the enzyme, indicating the possible presence of cysteine residues in the active site pocket.     

AFLP genetic diversity analysis in Russian wheat aphid resistant wheat accessions

Russian wheat aphid (RWA), Diuraphis noxia (Mordvilko), is an important insect pest which causes severe economic losses in wheat (Triticum spp.). Among the various U.S. RWA biotypes, biotype 1 (RWA1) and biotype 2 (RWA2) are the most prevalent and most virulent on cultivated genotypes. Although many sources of resistance to these biotypes are available among landraces, their relatedness should be characterized to permit their more efficient use in breeding programs. In this study, 38 hexaploid accessions resistant to biotype 1 and/or biotype 2 were evaluated for genetic diversity based on amplified fragment length polymorphisms (AFLP). Fifteen AFLP selective primer combinations were used to genotype these accessions, resulting in 893 amplicons. Of these, 274 (30.6%) informative polymorphic bands were used for genetic diversity analysis. Genetic similarity coefficients ranged from 0.47 to 0.87 among the resistant accessions, indicating high genetic diversity among them. Cluster analysis grouped the 38 accessions into two major clusters, I and II, including resistant lines for RWA1 and RWA2. The study indicated that accessions in the National Small Grains Collection conferring RWA1 or RWA2 resistance comprise a diversified population which should support introgression efforts and provide genetic diversity for future breeding for RWA resistance.     

Plant water relations and nutrient uptake in French bean

Summary Field investigations carried out at the Indian Institute of Horticultural Research, Bangalore, during 1985–1986 and 1986–1987 with French bean crops indicated that irrigation when soil matric potential at 0.15 m depth reached — 45 kPa resulted in highest dry matter production, green pod yield, nutrient uptake and water use efficiency (WUE) as compared to irrigations scheduled at -65 or -85 kPa. The difference in pod yield between irrigations scheduled at -25 and -45 kPa was not significant. Increasing soil moisture stress increased the canopy temperature and adversely affected plant water relations. There was a quadratric relationship between green pod yield and evapotranspiration (ET) with the yield-maximising ET ranging between 268 and 299 mm. Nitrogen fertilization significantly increased green pod yield, nutrient uptake and WUE but had no marked effect on water relations and canopy temperature.Contribution No. 234/88 of Indian Institute of Horticultural Research, Bangalore, India     

GRACE measurements of mass variability in the Earth system

Monthly gravity field estimates made by the twin Gravity Recovery and Climate Experiment (GRACE) satellites have a geoid height accuracy of 2 to 3 millimeters at a spatial resolution as small as 400 kilometers. The annual cycle in the geoid variations, up to 10 millimeters in some regions, peaked predominantly in the spring and fall seasons. Geoid variations observed over South America that can be largely attributed to surface water and groundwater changes show a clear separation between the large Amazon watershed and the smaller watersheds to the north. Such observations will help hydrologists to connect processes at traditional length scales (tens of kilometers or less) to those at regional and global scales.     

Acute effects of copper on superoxide dismutase, catalase and lipid peroxidation in the freshwater teleost fish, Esomus danricus

Static-renewal bioassays [Methods for acute toxicity tests with fish, macro-invertebrates and amphibians: USEPA, ERS, EPA 660/3 75-009 (1975)] were carried out on Esomus danricus exposed to sub-lethal (0.55 mg/l) and lethal (5.5 mg/l) concentrations of copper. The 96-h median lethal concentration (LC₅₀) was 5.5 mg/l. Biochemical stress responses, such as visceral superoxide dismutase (SOD) and catalase (CAT) activities, were measured during this 96-h period. Malondialdehyde, a product of lipid peroxidation, was present at elevated levels in the visceral tissue of copper-exposed fish. Copper was found to be highly toxic to the fish and induced significant declines (p < 0.05–0.001) in all of the biochemical profiles studied, demonstrating a linear and positive correlation with both the concentration and duration of exposure to copper. In E. danricus, CAT appeared to be more sensitive to copper exposure (p < 0.001) than SOD at both lethal and sub-lethal levels. These results indicate that antioxidant responses can be employed as biomarkers of oxidative stress for this species in aquatic environments contaminated with copper.     

Effect of 13 Years Long Minimum Tillage Cum Conjunctive Nutrient Management Practices on Soil Fertility and Nitrogen Chemical Fractions under Sorghum (Sorghum bicolour (L.) Moench)–Mungbean (Vigna radiata (L.) Wilczek) System in Semi-Arid Tropical Alfisol (SAT) in Southern India

A long-term experiment was conducted at the Central Research Institute for Dryland Agriculture for 13 years to evaluate the effect of low tillage cum cheaper conjunctive nutrient management practices in terms of productivity, soil fertility, and nitrogen chemical pools of soil under sorghum–mung bean system in Alfisol soils. The results of the study clearly revealed that sorghum and mung bean grain yield as influenced by low tillage and conjunctive nutrient management practices varied from 764 to 1792 and 603 to 1008 kg ha^?1 with an average yield of 1458 and 805 kg ha^?1 over a period of 13 years, respectively. Of the tillage practices, conventional tillage (CT) maintained 11.0% higher yields (1534 kg ha^?1) over the minimum tillage (MT) (1382 kg ha^?1) practice. Among the conjunctive nutrient management treatments, the application of 2 t Gliricidia loppings + 20 kg nitrogen (N) through urea to sorghum crop recorded significantly highest grain yield of 1712 kg ha^?1 followed by application of 4 t compost + 20 kg N through urea (1650 kg ha^?1) as well as 40 kg N through urea alone (1594 kg ha^?1). Similar to sorghum, in case of mung bean also, CT exhibited a significant influence on mung bean grain yields (888 kg ha^?1) which was 6.7% higher compared to MT (832 kg ha^?1). Among all the conjunctive nutrient management treatments, 2 t compost + 10 kg N through urea and 2 t compost + 1 t Gliricidia loppings performed significantly well and recorded similar mung bean grain yields of 960 kg ha^?1 followed by 1 t Gliricidia loppings + 10 kg N through urea (930 kg ha^?1). The soil nitrogen chemical fractions (SNCFs) were also found to be significantly influenced by tillage and conjunctive nutrient management treatments. Further, a significant correlation of SNCF with total soil nitrogen was observed. In the correlation study, it was also observed that N fraction dynamically played an important role in enhancing the availability pool of N in soil and significantly influenced the yield of sorghum grain and mung bean.     

Improving hybrid rice parental lines for blast resistance by introgression of broad-spectrum resistance genes Pi54 and Pi9 by marker-assisted selection

Hybrid rice technology offers a great promise to produce 15% to 20% more yield than pure line varieties. The success of hybrid rice hinges on developing superior parental lines. To improve the blast resistance of hybrid rice parental line RP5933-1-19-2R, crosses were made with donors of two major blast resistance genes namely, Pi54 (Tetep) and Pi9 (IR71033–121-15) and the resulting F₁s were confirmed for their hybridity by using Pi54MAS and NMSMPi9-1 genic markers. The confirmed F₁s were intercrossed to obtain ICF₁s and selected positive plants by markers were backcrossed to the recurrent parent, as well as selfed for advancing further to BC₁F₃ and ICF₄ generations. The segregating plants were phenotyped for blast resistance at Uniform Blast Nursery. The identified complete restorers namely, RP 6619-1, RP 6616-26, RP 6619-3 and RP 6619-11 with Pi9 and Pi54 genes would serve as donors for broad spectrum blast resistance. This could ultimately lead to the development of new rice hybrids with improved resistance to blast disease, which is crucial for sustainable rice production and food security.