Method for Estimating the Content of the Chloroform-Extractable Green Fraction (CEGF) in HCl-DMSO Extract of Soils

Chloroform-extractable green fraction (CEGF) was detected in the supernatant obtained by alkali precipitation from the HCI-dimethylsulfoxide (DMSO) extract of Pg-rich soil. In the alkaline solution, the color of CEGF was green and CEGF showed strong Pg-like absorption bands. Ultraviolet and visible (UV-VIS) spectral analysis and gel chromatography on Sephadex G-50 were performed to compare several properties between CEGF and Pg. CEGF, which was purified by gel chromatography on Bio-Beads SX-1, displayed strong absorption bands at 609, 562, 445 and 280 inn in the alkaline solution. These absorption bands were almost similar to those of Pg. Furthermore, the UV-VIS spectrum of CEGF in the organic solvents showed a similar characteristic pattern of 4,9-dihydroxyperylene-3,10-quinone (DHPQ), which was considered to be a chromophore of Pg. Based on the results of gel chromatography on Sephadex G-50, CEGF mainly consisted of two fractions, corresponding to the G₂ and G₃ fractions of Pg. These results indicated that the method for extracting CEGF from Pg-rich soil in the present study was easy and selective and that CEGF was one of the components of, or a closely related substance to Pg. A colorimetric method for the estimation of the CEGF content in soils was developed. The calibration curve of CEGF was linear over a wide range of contents from 2.75 to 220 mg L⁻¹. The CEGF content in twelve samples of various soils was examined. CEGF was detected in all the soil sampled (5 orders) including three samples (3 orders) where Pg was not detected, and the content ranged from 0.07 to 1.66 g kg⁻¹ (dry soil). Therefore, the method for estimating the CEGF content in soils developed in the present study was found to be suitable for various soil orders and it was assumed that CEGF occurred in various soil orders.     

Remediation of Acid Rock Drainage by Regenerable Natural Clinoptilolite

Clinoptilolite is investigated as a possible regenerable sorbent for acid rock drainage based on its adsorption capacity for Zn, adsorption kinetics, effect of pH, and regeneration performance. Adsorption of Zn ions depends on the initial concentration and pH. Adsorption/Desorption of Zn reached 75% of capacity after 1–2 h. Desorption depended on pH, with an optimum range of 2.5 to 4.0. The rank of desorption effectiveness was EDTA?>?NaCl?>?NaNO₃?>?NaOAc?>?NaHCO₃?>?Na₂CO₃?>?NaOH?>?Ca(OH)₂. For cyclic absorption/desorption, adsorption remained satisfactory for six to nine regenerations with EDTA and NaCl, respectively. The crystallinity and morphology of clinoptilolite remained intact following 10 regeneration cycles. Clinoptilolite appears to be promising for ARD leachate treatment, with significant potential advantages relative to current treatment systems.     

The abundance of heterocystous blue-green algae in rice soils and inocula used for application in rice fields

Summary Algal populations were quantified (as colony-forming units [CFU] per square centimetre) in 102 samples of rice soils from the Philippines, India, Malaysia and Portugal, and in 22 samples of soil-based inocula from four countries. Heterocystous blue-green algae (BGA) were present in all samples. Nostoc was the dominant genus in most samples, followed by Anabaena and Calothrix. In soils, heterocystous BGA occurred at densities ranging from 1.0 × 10² to 8.0 × 10⁶ CFU/cm² (median 6.4 × 10⁴) and comprised, on average, 9% of the total CFU of algae. Their abundance was positively correlated with the pH and the available P content of the soils. In soil-based inocula, heterocystous BGA occurred at densities ranging from 4.6 × 10⁴ to 2.8 × 10⁷ CFU/g dw (dry weight), comprising only a moderate fraction (average 13%) of the total algae. In most soils, the density of indigenous N₂-fixing BGA was usually higher than that attained by applying recommended rates of soil-based inoculum. Whereas research on the practical utilization of BGA has been mostly directed towards inoculation with foreign strains, our results suggest that attention should also be given to agricultural practices that enhance the growth of indigenous strains already adapted to local environmental conditions.Maître de Recherches ORSTOM (France), Visiting Scientist at IRRI     

Quantification of genetically modified soybean by quenching probe polymerase chain reaction

Quenching probe (QProbe) polymerase chain reaction (PCR) is a simple and cost-effective real-time PCR assay in comparison with other real-time PCR assays such as the TaqMan assay. We used QProbe-PCR to quantify genetically modified (GM) soybean (Roundup Ready soybean). We designed event-specific QProbes for Le1 (soy endogenous gene) and RRS (recombinant gene), and we quantified certified reference materials containing 0.1, 0.5, 1, 2, and 5% GM soybean. The TaqMan assay was also applied to the same samples, and the results were compared. The accuracy of QProbe-PCR was similar to that of TaqMan assay. When GM soybean content was 0.5% or more, the relative standard deviations of QProbe-PCR were less than 20%. QProbe-PCR is sensitive enough to monitor labeling systems and has acceptable levels of accuracy and precision.     

Effect of land management and soil texture on seasonal variations in soil microbial biomass in dry tropical agroecosystems in Tanzania

Soil microbes are an essential component of most terrestrial ecosystems; as decomposers they are responsible for regulating nutrient dynamics, and they also serve as a highly labile nutrient pool. Here, we evaluated seasonal variations in microbial biomass carbon (MBC) and nitrogen (MBN) as well as microbial activity (as qCO₂) for 16 months with respect to several factors relating to soil moisture and nutrients under different land management practices (plant residue application, fertilizer application) in both clayey (38% clay) and sandy (4% clay) croplands in Tanzania. We observed that MBC and MBN tended to decrease during the rainy season whereas they tended to increase and remain at high levels during the dry season in all treatment plots at both of our test sites, although soil moisture did not correlate with MBC or MBN. qCO₂ correlated with soil moisture in all treatment plots at both sites, and hence soil microbes act as decomposers mainly during the rainy season. Although the effect of seasonal variation of soil moisture on the dynamics of MBC, MBN, and qCO₂ was certainly greater than that attributable to plant residue application, fertilizer application, or soil texture, plant residue application early in the rainy season clearly increased MBC and MBN in both clayey and sandy soils. This suggests that plant residue application can help to not only counter the N loss caused by leaching but also synchronize crop N uptake and N release from soil microbes by utilizing these microbes as an ephemeral nutrient pool during the early crop growth period. We also found substantially large seasonal variations in MBC and MBN, continuously high qCO₂, and rapid turnover of soil microbes in sandy soil compared to clayey soil. Taken together, our results indicate that soil microbes, acting as both a nutrient pool and decomposers, have a more substantial impact on tropical sandy soil than on clayey soil.     

Further clarification of winter energy and protein requirements at the optimum feeding frequency for yellowtail

SUMMARY: This is another report from a series of studies aimed at determining the energy and protein requirements based on the optimum feeding frequency of yellowtail during the winter season. Experiments were conducted at Mie and Oita Prefectures, Japan, employing extruded pellets of known digestible energy (DE) and digestible protein (DP) values. Four groups of fish were fed at frequencies of five, three, two, and one time(s) per week. The most efficient feed performance was obtained for the feeding frequenecy of three times per week. The DE and DP requirements calculated based on the feeding rate at this frequency were 38.7 kcal and 2.8 g/kgBW per day (14.3–17.3°C) in Mie and 30.4 kcal and 2.2 g/kgBW per day (13.8–17.5°C) in Oita, respectively. The present results and the observations on the changes of the contents in digestive tracts tallied with our previous work, confirming that the optimum feeding frequency was three times per week.     

Daily growth increment formation and its lunar periodicity in otoliths of the myctophid fish Myctophum asperum (Pisces: Myctophidae)

ABSTRACT: The surface-migratory myctophid fish, Myctophum asperum , of the western North Pacific was found to have daily growth increments of its sagittal otolith, which also exhibited lunar periodicity in the deposition of increments. Daily deposition of the otolith increments was verified because the width of the marginal increment increased during the night and early morning between 20.00 h and 08.00 h and its growth stopped during the day. An autocorrelation analysis of the increment widths, which were measured consecutively in 11 specimens covering 33 synodic months, also showed a lunar periodicity in increment deposition. The mean increment widths during five days around the time of a full moon were significantly narrower than those around a new moon in 18 of the 33 full moon cases ( P < 0.01: Student's t -test) and, on average, tended to be narrow in 29 cases. The cause of this tendency is thought to be slower growth caused by staying in deeper and colder habitat due to the suppression of diel vertical migration and/or lower food availability resulting from the possible dispersion of zooplankton during the full moon period.     

Histological Studies on the Endocrine Pancreas in the Dog

Based on histological structure and cellular formation, the endocrine pancreas (pars endocrina pancreatis) (PEP) or pancreatic islet (insulae pancreaticae), was divided into two types in the dog. One type of PEP was the islet of Langerhans. In the glandular lobule, the islet was surrounded by exocrine acini. The other type of PEP, in general, exhibited a feature of a neuro-insular complex. It was found within the interlobular connective tissue of the pancreas. This type of PEP was attached to a nerve bundle or ganglion. In the pancreas of the immature dog, a large population of endocrine cells was recognized to form a blood islet within the neuro-insular complex.     

Lordotic Deformation and Abnormal Development of Swim Bladders in Some Hatchery-Bred Marine Physoclistous Fish in Japan

At many hatcheries in Japan, a high incidence of lordosis is being reported among marine physoclistous juveniles of red sea bream, Japanese sea bass, and amberjack. Extensive studies being conducted since 1975 to tackle this problem have led to the following conclusions, and effective countermeasures are being proposed.
During early larval development in the temporary physostomous stage, fish must be able to gulp air at the water surface for normal development of the swim bladder. The juveniles that fail to gulp air swim upward in an oblique position because of insufficient buoyancy, causing the backbone to curve in a V-shape.
The managerial solutions proposed are: 1) reduce the strong water current caused by vigorous aeration; 2) provide nutrient-enriched rotifers to produce healthy swimming larvae; and 3) prevent any oily film formation on the water surface.