Genetic diversity and population structure analysis of <Emphasis Type="Italic">Pistacia</Emphasis> species revealed by <Emphasis Type="Italic">phenylalanine ammonia</Emphasis>-<Emphasis Type="Italic">lyase</Emphasis> gene markers and implications for conservation

Information on population genetic structure and crop genetic diversity is important for genetically improving crop species and conserving threatened species. The PAL gene sequence is part of a multigene family that can be utilized to design DNA marker systems for genetic diversity and population structure investigation. In the current study, genetic diversity and population structure of 100 accessions of wild Pistacia species were investigated with 78 PAL markers. A protocol for using PAL sequences as DNA markers was developed. A total of 313 PAL loci were recognized, showing 100% polymorphism for PAL markers. The PAL markers produced relatively more observed and effective alleles in Pistacia falcata and Pistacia atlantica, with a higher Shannon’s information index and expected heterozygosity in P. atlantica, Pistacia vera and Pistacia mutica. Pairwise assessment of Nei’s genetic distance and genetic identity between populations revealed a close association between geographically isolated populations of Pistacia khinjuk and Pistacia chinensis. The accessions of wild Pistacia species had more genetic relationship among studied groups of species. Analysis of molecular variance indicated 19% among-population variation and 81% within-population variation for the PAL gene based DNA marker. Population structure analysis based on PAL revealed four groups with high genetic admixture among populations. The results establish PAL markers as a functional DNA marker system and provide important genetic information about accessions from wild populations of Pistacia species.     

Assessment of genetic divergence in salt tolerance of soybean (<Emphasis Type="Italic">Glycine max</Emphasis> L.) genotypes

A large number of soybean (Glycine max L.) genotypes of diverse growth habit and adaptive characters were used in the experiment. Soil salinity-induced changes in nine morpho-physiological characters of 30-day-old seedlings of 170 soybean genotypes were compared in the study. The first and second principal components (PC) of principal component analysis (PCA) results accounted for 97 and 2.5%, respectively, of the total variations of soybean genotypes. The variation for the first PC was composed mainly of relative total dry weight (DW), relative shoot dry weight, as well as petiole dry weight. There were four clusters distinguished in the cluster analysis. The genotypes in cluster IV performed better in respect to relative total dry weight and relative shoot dry weight and hence having salt tolerance. The genotypes clusters III performed very poorly and those of clusters II and I were moderate to poor. D2 analysis indicated that the clusters differed significantly from each other. Discriminant function analysis (DFA) again asserts strongly that more than 92% of the genotypes were correctly assigned to clusters. Both PCA and DFA confirmed that the relative total DW followed by shoot and petiole DW were the major discriminatory variables, and the root DW were the secondary important variables to distinguish genotypes into groups. In this study, multivariate analyses were used in identifying the soybean genotypes of desirable traits for salt tolerance.     

DNA vaccine encoding avian influenza virus H5 and Esat-6 of Mycobacterium tuberculosis improved antibody responses against AIV in chickens

The H5 gene of avian influenza virus (AIV) strain A/chicken/Malaysia/5744/2004(H5N1) was cloned into pcDNA3.1 vector, and Esat-6 gene of Mycobacterium tuberculosis was fused into downstream of the H5 gene as a genetic adjuvant for DNA vaccine candidates. The antibody level against AIV was measured using enzyme-linked immunosorbent assay (ELISA) and haemagglutination inhibition (HI) test. Sera obtained from specific-pathogen-free chickens immunized with pcDNA3.1/H5 and pcDNA3.1/H5/Esat-6 demonstrated antibody responses as early as 2 weeks after the first immunization. Furthermore, the overall HI antibody titer in chickens immunized with pcDNA3.1/H5/Esat-6 was higher compared to the chickens immunized with pcDNA3.1/H5 (p < 0.05). The results suggested that Esat-6 gene of M. tuberculosis is a potential genetic adjuvant for the development of effective H5 DNA vaccine in chickens.     

Influence of prohexadione-calcium on growth and gibberellins content of Chinese cabbage grown in alpine region of South Korea

We investigated the effect of prohexadione-calcium (Pro-Ca) on growth characteristics and endogenous gibberellins content of Chinese cabbage grown in the alpine region of South Korea. Pro-Ca was applied at the rates of 200 ppm and 400 ppm, after 10, 15 and 20 days of transplanting seedlings in to the field. Application of Pro-Ca through foliage improved quality and quantity of yield by promoting Chinese cabbage head yield, number of head leaves, total soluble sugar content and compactness of head. The leaf size was reduced, while the chlorophyll content increased under the influence of elevated Pro-Ca application, when measured after 40 days of transplantation. The endogenous bioactive GA₁ and GA₄ contents of Chinese cabbage drastically decreased with elevated Pro-Ca, indicating that gibberellins (GAs) biosynthesis was blocked by this chemical. Current study suggests that both of GAs biosynthesis pathways are operational in Chinese cabbage, although non-C13-hydroxylation pathway was found to be the major pathway. GAs were quantified by gas chromatography/mass spectroscopy-selective ion monitoring (GC/MS-SIM).     

Effects of interactions among Metarhizium anisopliae, Bacillus thuringiensis and chlorantraniliprole on the mortality and pupation of six geographically distinct Helicoverpa armigera field populations

A local isolate of Metarhizium anisopliae (Hypocreales: Clavicipitaceae), Bacillus thuringiensis subsp. kurstaki and chlorantraniliprole were assessed against six field populations of tomato fruitworm Helicoverpa armigera Hübner (Lepidoptera: Noctuidae) in a series of laboratory bioassays. Two dose rates of B. thuringiensis (0.5, 1 μg g^?1), one of both M. anisopliae (1.3?×?10⁶ conidia ml^?1) and chlorantraniliprole (0.01 ppm) were applied alone and in combination with each other against 2nd, 3rd, 4th and 5th larval instars. The mortality was observed every 24 h until pupation. The bioassays were carried out at 25°C and 75% r.h. The highest mortality was observed in Rawalpindi with the lowest pupation rate by applying the combined concentrations of B. thuringiensis and chlorantraniliprole. The lowest mortality was observed in population from Gujranwala among all the tested populations. The antagonistic interaction was noted where the high dose rate of B. thuringiensis was combined with M. anisopliae; however, the remaining interactions enhanced the mortality and reduced the percent pupation. The overall results demonstrated that all the treatments gave significant control of the larval instars of H. armigera. The population from Gujranwala proved least susceptible whereas the one from Rawalpindi was highly susceptible.     

Comparison of sulfurous acid generator and alternate amendments to improve the quality of saline-sodic water for sustainable rice yields

The prolonged irrigation with marginal quality water can cause secondary salinization of soils, which necessitates for better understanding of water management alternatives. Relative performance of sulfuric acid and gypsum is still controversial to counter sodium hazards in soil/water system. As an alternative, sulfurous acid generators (SAG) are also being marketed. But up-till-now, there is not even a single field study published in scientific journals about their efficiency and economical viability for the treatment of saline-sodic water. Therefore, a field study was carried out to compare the effectiveness of SAG and alternate amendments applied on an equivalent basis to grow rice crop. SAG treatment of saline-sodic tube well water decreased only residual sodium carbonate (RSC) from 5.4 to 3.6 mmol_c l⁻¹, and had no beneficial effect on its sodium adsorption ratio (SAR) or electrical conductivity (EC). All the treatments kept soil EC and SAR around their respective threshold levels. For paddy yield, SAG, sulfuric acid, and gypsum treatments depicted nonsignificant differences. SAG and sulfuric acid treatments of water were about six times expensive than that of gypsum. It was concluded that soil-applied gypsum, to counter sodic hazards of irrigation water, is economical to sustain irrigated rice in dry regions.     

Inter- and Intra-specific Differences in the Response of Chinese Leafy Vegetables to Ozone

The response to ozone (O₃) of a range of Chinese leafy vegetables was investigated with respect to both inter- and intra-specific differences in sensitivity. In the interspecific experiment local Chinese cultivars of pak choi, rape, leaf mustard, leaf lettuce and coriander were fumigated with 90?ppb O₃ for 9?h daily for 22?C30?days. A similar fumigation was carried out using four different cultivars of pak choi. Sequential measurements were made of leaf injury, photosynthetic rate, stomatal conductance and chlorophyll fluorescence, together with dry weights at a final harvest. O₃ injury appeared as white or yellow blemishes on the leaf surface of all species. The first signs of injury were seen following only 3-days?? O₃ exposure (pak choi); the extent of injured leaf area increased over time for all species and cultivars, with 44.6% of the leaf area visibly injured for leaf mustard, the species with the greatest extent of injury, following 30-days?? exposure. Significant reductions in photosynthetic rate (22.7?C40.7%) and stomatal conductance (19.1?C33.1%) were found for all species and cultivars following O₃ exposure. Plant productivity was also reduced in O₃ compared to filtered air, with significant yield reductions for all species (11.1?C50.8% above-ground dry weight) as well as for all cultivars of pak choi (15.8?C28.1% above-ground dry weight). The mechanisms for observed impacts are discussed, together with the implications for current and future production of vegetables in the southern China province of Guangdong.     

Clinical assessment and grading of back pain in horses

BackgroundThe clinical presentation of horses with back pain (BP) vary considerably with most horse''s willingness to take part in athletic or riding purpose becoming impossible. However, there are some clinical features that are directly responsible for the loss or failure of performance.ObjectivesTo investigate the clinical features of the thoracolumbar region associated with BP in horses and to use some of the clinical features to classify equine BP.MethodsTwenty-four horses comprised of 14 with BP and 10 apparently healthy horses were assessed for clinical abnormality that best differentiate BP from normal horses. The horses were then graded (0–5) using the degree of pain response, muscular hypertonicity, thoracolumbar joint stiffness and overall physical dysfunction of the horse.ResultsThe common clinical features that significantly differentiate horses with BP from non-BP were longissimus dorsi spasm at palpation (78.6%), paravertebral muscle stiffness (64.3%), resist lateral bending (64.3%), and poor hindlimb impulsion (85.7%). There were significantly (p < 0.05) higher scores for pain response to palpation, muscular hypertonicity, thoracolumbar joint stiffness and physical dysfunction among horses with BP in relation to non-BP. A significant relationship exists between all the graded abnormalities. Based on the cumulative score, horses with BP were categorized into mild, mild-moderate, moderate and severe cases.ConclusionsBP in horse can be differentiated by severity of pain response to back palpation, back muscle hypertonicity, thoracolumbar joint stiffness, physical dysfunctions and their cumulative grading score is useful in the assessment and categorization of BP in horses.     

Evaluation of the antigen relatedness and efficacy of a single vaccination with different infectious bronchitis virus strains against a challenge with Malaysian variant and QX-like IBV strains

BackgroundThe predominant infectious bronchitis virus (IBV) strains detected in chickens in Malaysia are the Malaysian variant (MV) and QX-like, which are associated with respiratory distress, nephropathy, and high mortality. On the other hand, the antigenic relatedness and efficacy of IBV vaccines against these 2 field IBV strains are not well characterized.ObjectivesThis study aimed to determine the antigen relatedness and efficacy of different IB vaccine strains against a challenge with MV and QX-like strains.MethodsThe antigen relatedness and the ability of different IB vaccine strains in conferring protection against MV and QX-like were assessed based on the clinical signs, macroscopic lesions, and ciliary activity.ResultsThe MV strain IBS037A/2014 showed minor antigenic subtype differences with the vaccine virus Mass H120 and 4/91 strains but showed major antigenic subtype differences with the K2 strain. The Malaysian QX-like strain IBS130/2015 showed major antigenic subtype differences with the MV strain IBS037A/2014 and the vaccine strains except for K2. Chickens vaccinated once with Mass (H120) or with non-Mass (4/91 and K2) developed antibody responses with the highest antibody titer detected in the groups vaccinated with H120 and 4/91. The mean ciliary activities of the vaccinated chickens were between 56 to 59% and 48 to 52% in chickens challenged with IBS037A/2014 and IBS130/2015, respectively. The vaccinated and challenged birds showed mild to severe lesions in the lungs and kidneys.ConclusionsDespite the minor antigenic subtype differences, a single inoculation with Mass or non-Mass vaccines could not protect against the MV IBS037A/2014 and QX-like IBS130/2015.